RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PDE3BQ13370 1112 aa21.35■■□□□ 1.01
CACNA1A-227ENST00000636549 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
CACNA1A-227ENST00000636549 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
CACNA1A-227ENST00000636549 REC8O95072 547 aa21.34■■□□□ 1.01
CACNA1A-227ENST00000636549 SART3Q15020 963 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-227ENST00000636549 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
CACNA1A-227ENST00000636549 NLRP13Q86W25 1043 aa21.33■■□□□ 1
CACNA1A-227ENST00000636549 H0YHG0 523 aa21.32■■□□□ 1
CACNA1A-227ENST00000636549 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
CACNA1A-227ENST00000636549 PRDM2Q13029 1718 aa21.32■■□□□ 1
CACNA1A-227ENST00000636549 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
CACNA1A-227ENST00000636549 CDR1P51861 262 aa21.31■■□□□ 1
CACNA1A-227ENST00000636549 RDXP35241 583 aaKnown RBP21.31■■□□□ 1
CACNA1A-227ENST00000636549 DHX8Q14562 1220 aaKnown RBP21.31■■□□□ 1
CACNA1A-227ENST00000636549 DEF6Q9H4E7 631 aa21.31■■□□□ 1
CACNA1A-227ENST00000636549 AXDND1Q5T1B0 1012 aaPredicted RBP21.31■■□□□ 1
CACNA1A-227ENST00000636549 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
CACNA1A-227ENST00000636549 CCDC69A6NI79 296 aa21.3■■□□□ 1
CACNA1A-227ENST00000636549 HSP90AB3PQ58FF7 597 aa21.3■■□□□ 1
CACNA1A-227ENST00000636549 PDE4AP27815 886 aa21.3■■□□□ 1
CACNA1A-227ENST00000636549 INTS3Q68E01 1043 aaKnown RBP21.3■■□□□ 1
CACNA1A-227ENST00000636549 CNTROBQ8N137 903 aa21.3■■□□□ 1
CACNA1A-227ENST00000636549 MPHOSPH8Q99549 860 aa21.29■■□□□ 1
CACNA1A-227ENST00000636549 SMARCA2P51531 1590 aa21.29■■□□□ 1
CACNA1A-227ENST00000636549 TAF3Q5VWG9 929 aa21.29■■□□□ 1
CACNA1A-227ENST00000636549 RAI14Q9P0K7 980 aa21.29■■□□□ 1
CACNA1A-227ENST00000636549 CCDC158Q5M9N0 1113 aa21.28■■□□□ 1
CACNA1A-227ENST00000636549 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
CACNA1A-227ENST00000636549 KIF15Q9NS87 1388 aa21.28■■□□□ 1
CACNA1A-227ENST00000636549 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
CACNA1A-227ENST00000636549 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
CACNA1A-227ENST00000636549 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
CACNA1A-227ENST00000636549 CENPQQ7L2Z9 268 aaPredicted RBP21.27■■□□□ 1
CACNA1A-227ENST00000636549 WASHC2AQ641Q2 1341 aa21.27■■□□□ 1
CACNA1A-227ENST00000636549 OSCARQ8IYS5 282 aa21.27■□□□□ 0.99
CACNA1A-227ENST00000636549 TXLNAP40222 546 aa21.26■□□□□ 0.99
CACNA1A-227ENST00000636549 TNNT1P13805 278 aa21.26■□□□□ 0.99
CACNA1A-227ENST00000636549 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
CACNA1A-227ENST00000636549 GNL3LQ9NVN8 582 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-227ENST00000636549 CCDC181Q5TID7 509 aa21.25■□□□□ 0.99
CACNA1A-227ENST00000636549 HSP90B2PQ58FF3 399 aa21.25■□□□□ 0.99
CACNA1A-227ENST00000636549 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
CACNA1A-227ENST00000636549 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
CACNA1A-227ENST00000636549 NOM1Q5C9Z4 860 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-227ENST00000636549 NFKBIBQ15653 356 aa21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 TRIM5Q9C035 493 aa21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 NACADO15069 1562 aa21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 HMGN5P82970 282 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 VTI1AQ96AJ9 217 aa21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 UBA5Q9GZZ9 404 aa21.24■□□□□ 0.99
CACNA1A-227ENST00000636549 CCDC191Q8NCU4 936 aa21.23■□□□□ 0.99
CACNA1A-227ENST00000636549 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-227ENST00000636549 ABCF2Q9UG63 623 aa21.23■□□□□ 0.99
CACNA1A-227ENST00000636549 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 TDO2P48775 406 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 FIBPO43427 364 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 DNA2P51530 1060 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 TMX1Q9H3N1 280 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 SERPINC1P01008 464 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 GPRASP1Q5JY77 1395 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
CACNA1A-227ENST00000636549 API5Q9BZZ5 524 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-227ENST00000636549 ANKIB1Q9P2G1 1089 aa21.21■□□□□ 0.99
CACNA1A-227ENST00000636549 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-227ENST00000636549 MYO6Q9UM54 1294 aa21.2■□□□□ 0.98
CACNA1A-227ENST00000636549 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
CACNA1A-227ENST00000636549 DRC1Q96MC2 740 aa21.2■□□□□ 0.98
CACNA1A-227ENST00000636549 ERC1Q8IUD2 1116 aa21.2■□□□□ 0.98
CACNA1A-227ENST00000636549 FILIP1LQ4L180 1135 aa21.19■□□□□ 0.98
CACNA1A-227ENST00000636549 NAT10Q9H0A0 1025 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-227ENST00000636549 STK38Q15208 465 aa21.19■□□□□ 0.98
CACNA1A-227ENST00000636549 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
CACNA1A-227ENST00000636549 LRP2BPQ9P2M1 347 aa21.19■□□□□ 0.98
CACNA1A-227ENST00000636549 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 MTHFSP49914 203 aa21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 ZRSR2Q15696 482 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 CAVIN1Q6NZI2 390 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 SMARCE1Q969G3 411 aa21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 COMMD10Q9Y6G5 202 aa21.18■□□□□ 0.98
CACNA1A-227ENST00000636549 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 SERPINA10Q9UK55 444 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 CLEC11AQ9Y240 323 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 CCDC57Q2TAC2 916 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 PSMA5P28066 241 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 TSHZ2Q9NRE2 1034 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 MIS18AQ9NYP9 233 aa21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 PTCD1O75127 700 aaKnown RBP21.17■□□□□ 0.98
CACNA1A-227ENST00000636549 DCTN1Q14203 1278 aa21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 PLEKHO1Q53GL0 409 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 CT47B1P0C2W7 299 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 CHMP5Q9NZZ3 219 aa21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 ROCK1Q13464 1354 aa21.16■□□□□ 0.98
CACNA1A-227ENST00000636549 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 RBM10P98175 930 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 CCDC30Q5VVM6 783 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 ANAPC15P60006 121 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms