RNA–Protein interactions for RNA: ENST00000636436.1

SYNGAP1-214, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-214ENST00000636436 PDE3BQ13370 1112 aa4.39□□□□□ -1.71
SYNGAP1-214ENST00000636436 NBPF8Q3BBV2 869 aa4.39□□□□□ -1.71
SYNGAP1-214ENST00000636436 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
SYNGAP1-214ENST00000636436 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
SYNGAP1-214ENST00000636436 TULP4Q9NRJ4 1543 aa4.39□□□□□ -1.71
SYNGAP1-214ENST00000636436 DISP2A7MBM2 1401 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 ABCA3Q99758 1704 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 ATP7BP35670 1465 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 WASLO00401 505 aaPredicted RBP4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 APBA3O96018 575 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 R3HDM1Q15032 1099 aaKnown RBP4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 CFAP70Q5T0N1 1121 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 HIRIP3Q9BW71 556 aaPredicted RBP4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 STRN4Q9NRL3 753 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 TRAK1Q9UPV9 953 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 SPATA31A5Q5VU36 1347 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 SPATA31A7Q8IWB4 1347 aa4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 MINK1Q8N4C8 1332 aaPredicted RBP4.38□□□□□ -1.71
SYNGAP1-214ENST00000636436 BRWD3Q6RI45 1802 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 YY1P25490 414 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 EZH2Q15910 746 aaKnown RBP4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 USP35Q9P2H5 1018 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 THRAP3Q9Y2W1 955 aaKnown RBP4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 SPATA31A1Q5TZJ5 1347 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 ITSN1Q15811 1721 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 NRAPQ86VF7 1730 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 KIAA0232Q92628 1395 aa4.37□□□□□ -1.71
SYNGAP1-214ENST00000636436 TRIM37O94972 964 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 ZC3H6P61129 1189 aaKnown RBP4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 FAM182BQ5T319 152 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 BARGINQ6ZT62 677 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 ABTB2Q8N961 1025 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 DCAF11Q8TEB1 546 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 SPON1Q9HCB6 807 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 NINLQ9Y2I6 1382 aa4.36□□□□□ -1.71
SYNGAP1-214ENST00000636436 ALS2Q96Q42 1657 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 THSD7AQ9UPZ6 1657 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 TRPM3Q9HCF6 1732 aaPredicted RBP4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 CHRNA2Q15822 529 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 NLRP13Q86W25 1043 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 TCP11L2Q8N4U5 519 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 NUDT16Q96DE0 195 aaKnown RBP4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 CAMKK2Q96RR4 588 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 KDM2AQ9Y2K7 1162 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 CCDC61Q9Y6R9 512 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 BRD4O60885 1362 aaPredicted RBP4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 OVOS2A0A0G2JMS6 1433 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 OVOS2A0A0J9YW53 1432 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 OVOS2Q6IE36 1432 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 SSH2Q76I76 1423 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 ADGRB1O14514 1584 aa4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 TNS1Q9HBL0 1735 aaKnown RBP4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 RGPD8O14715 1765 aaPredicted RBP4.35□□□□□ -1.71
SYNGAP1-214ENST00000636436 KCNQ2O43526 872 aa4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 SRPK2P78362 688 aaKnown RBP4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 CDCA7Q9BWT1 371 aaPredicted RBP4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 PRR36Q9H6K5 1346 aa4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 POLR3AO14802 1390 aaPredicted RBP4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 CPDO75976 1380 aa4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 RAB3GAP2Q9H2M9 1393 aa4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 PHRF1Q9P1Y6 1649 aaKnown RBP4.34□□□□□ -1.71
SYNGAP1-214ENST00000636436 CRB1P82279 1406 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 ACEP12821 1306 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 ZBTB7CA1YPR0 619 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 PLSCR1O15162 318 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 DDB1Q16531 1140 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 NUTM2GQ5VZR2 741 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 LARP1Q6PKG0 1096 aaKnown RBP4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 TOM1L2Q6ZVM7 507 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 CDK19Q9BWU1 502 aa4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 BCL11BQ9C0K0 894 aaPredicted RBP4.33□□□□□ -1.72
SYNGAP1-214ENST00000636436 NRKQ7Z2Y5 1582 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 COL5A2P05997 1499 aaPredicted RBP4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 PPIP5K1Q6PFW1 1433 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 USP19O94966 1318 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 CENPJQ9HC77 1338 aaPredicted RBP4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 PLEKHG3A1L390 1219 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 GCP02774 474 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 NLRP6P59044 892 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 KCNH5Q8NCM2 988 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 STK32BQ9NY57 414 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 ARHGEF28Q8N1W1 1705 aaKnown RBP4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 CRYBG1Q9Y4K1 1723 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 RREB1Q92766 1687 aa4.32□□□□□ -1.72
SYNGAP1-214ENST00000636436 AATKQ6ZMQ8 1374 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 EVC2Q86UK5 1308 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 CSB-PGBD3P0DP91 1061 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 NUP188Q5SRE5 1749 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 TOPAZ1Q8N9V7 1692 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 CAMTA1Q9Y6Y1 1673 aa4.31□□□□□ -1.72
SYNGAP1-214ENST00000636436 RGPD3A6NKT7 1758 aaPredicted RBP4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 RGPD4Q7Z3J3 1758 aa4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 CCDC7Q96M83 1385 aa4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 PARP4Q9UKK3 1724 aaKnown RBP4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 WDR17Q8IZU2 1322 aa4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 LMO7Q8WWI1 1683 aa4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 EXOC5O00471 708 aa4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 ZNF692Q9BU19 519 aaPredicted RBP4.3□□□□□ -1.72
SYNGAP1-214ENST00000636436 BCL9O00512 1426 aa4.29□□□□□ -1.72
SYNGAP1-214ENST00000636436 USP6P35125 1406 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms