RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PIBF1Q8WXW3 757 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
CLN5-208ENST00000636183 ZNF76P36508 570 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 GAS2L2Q8NHY3 880 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 SLC26A8Q96RN1 970 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 ZC3H6P61129 1189 aaKnown RBP19.3■□□□□ 0.68
CLN5-208ENST00000636183 LNPKQ9C0E8 428 aa19.3■□□□□ 0.68
CLN5-208ENST00000636183 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
CLN5-208ENST00000636183 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
CLN5-208ENST00000636183 INTS3Q68E01 1043 aaKnown RBP19.3■□□□□ 0.68
CLN5-208ENST00000636183 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
CLN5-208ENST00000636183 ZPR1O75312 459 aa19.29■□□□□ 0.68
CLN5-208ENST00000636183 USP5P45974 858 aa19.29■□□□□ 0.68
CLN5-208ENST00000636183 CENPQQ7L2Z9 268 aaPredicted RBP19.29■□□□□ 0.68
CLN5-208ENST00000636183 CLASRPQ8N2M8 674 aaKnown RBP19.29■□□□□ 0.68
CLN5-208ENST00000636183 NUP133Q8WUM0 1156 aa19.29■□□□□ 0.68
CLN5-208ENST00000636183 ANKRD62A6NC57 917 aa19.28■□□□□ 0.68
CLN5-208ENST00000636183 TXLNAP40222 546 aa19.28■□□□□ 0.68
CLN5-208ENST00000636183 CAGE1Q8TC20 777 aa19.28■□□□□ 0.68
CLN5-208ENST00000636183 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLN5-208ENST00000636183 SOGA3Q5TF21 947 aa19.28■□□□□ 0.68
CLN5-208ENST00000636183 PRAM1Q96QH2 718 aa19.28■□□□□ 0.68
CLN5-208ENST00000636183 MAGEC2Q9UBF1 373 aaPredicted RBP19.27■□□□□ 0.68
CLN5-208ENST00000636183 CCDC57Q2TAC2 916 aa19.27■□□□□ 0.68
CLN5-208ENST00000636183 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.68
CLN5-208ENST00000636183 NEFHP12036 1026 aa19.27■□□□□ 0.67
CLN5-208ENST00000636183 RAI14Q9P0K7 980 aa19.27■□□□□ 0.67
CLN5-208ENST00000636183 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
CLN5-208ENST00000636183 AK7Q96M32 723 aa19.26■□□□□ 0.67
CLN5-208ENST00000636183 USP47Q96K76 1375 aa19.26■□□□□ 0.67
CLN5-208ENST00000636183 SSBP05455 408 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLN5-208ENST00000636183 FKBP4Q02790 459 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLN5-208ENST00000636183 PSMA5P28066 241 aa19.25■□□□□ 0.67
CLN5-208ENST00000636183 EXOC6Q8TAG9 804 aa19.24■□□□□ 0.67
CLN5-208ENST00000636183 TTC16Q8NEE8 873 aa19.24■□□□□ 0.67
CLN5-208ENST00000636183 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
CLN5-208ENST00000636183 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
CLN5-208ENST00000636183 AFAP1Q8N556 730 aa19.24■□□□□ 0.67
CLN5-208ENST00000636183 VTI1AQ96AJ9 217 aa19.23■□□□□ 0.67
CLN5-208ENST00000636183 CCDC69A6NI79 296 aa19.23■□□□□ 0.67
CLN5-208ENST00000636183 SEPT11Q9NVA2 429 aaKnown RBP19.23■□□□□ 0.67
CLN5-208ENST00000636183 CRACR2BQ8N4Y2 399 aaPredicted RBP19.23■□□□□ 0.67
CLN5-208ENST00000636183 CEBPZQ03701 1054 aaKnown RBP19.23■□□□□ 0.67
CLN5-208ENST00000636183 CDR1P51861 262 aa19.23■□□□□ 0.67
CLN5-208ENST00000636183 TANGO6Q9C0B7 1094 aa19.22■□□□□ 0.67
CLN5-208ENST00000636183 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
CLN5-208ENST00000636183 ARHGAP5Q13017 1502 aa19.21■□□□□ 0.67
CLN5-208ENST00000636183 MAP4K4O95819 1239 aaPredicted RBP19.21■□□□□ 0.67
CLN5-208ENST00000636183 IGHMBP2P38935 993 aaKnown RBP19.21■□□□□ 0.67
CLN5-208ENST00000636183 ERC1Q8IUD2 1116 aa19.21■□□□□ 0.67
CLN5-208ENST00000636183 HDGFL1Q5TGJ6 251 aa19.21■□□□□ 0.67
CLN5-208ENST00000636183 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
CLN5-208ENST00000636183 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
CLN5-208ENST00000636183 TDO2P48775 406 aa19.19■□□□□ 0.66
CLN5-208ENST00000636183 SULT6B1Q6IMI4 303 aa19.19■□□□□ 0.66
CLN5-208ENST00000636183 IPO9Q96P70 1041 aaKnown RBP19.19■□□□□ 0.66
CLN5-208ENST00000636183 PRKAR2BP31323 418 aa19.19■□□□□ 0.66
CLN5-208ENST00000636183 CDK19Q9BWU1 502 aa19.19■□□□□ 0.66
CLN5-208ENST00000636183 STK3Q13188 491 aa19.18■□□□□ 0.66
CLN5-208ENST00000636183 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
CLN5-208ENST00000636183 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
CLN5-208ENST00000636183 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
CLN5-208ENST00000636183 PTCD1O75127 700 aaKnown RBP19.18■□□□□ 0.66
CLN5-208ENST00000636183 ZNF644Q9H582 1327 aaPredicted RBP19.18■□□□□ 0.66
CLN5-208ENST00000636183 TRIM21P19474 475 aaKnown RBP19.18■□□□□ 0.66
CLN5-208ENST00000636183 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
CLN5-208ENST00000636183 BTBD11A6QL63 1104 aa19.17■□□□□ 0.66
CLN5-208ENST00000636183 RRP1P56182 461 aaKnown RBP19.17■□□□□ 0.66
CLN5-208ENST00000636183 GNAI3P08754 354 aa19.17■□□□□ 0.66
CLN5-208ENST00000636183 SSR1P43307 286 aaKnown RBP19.17■□□□□ 0.66
CLN5-208ENST00000636183 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLN5-208ENST00000636183 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
CLN5-208ENST00000636183 TRMT1LQ7Z2T5 733 aaKnown RBP19.16■□□□□ 0.66
CLN5-208ENST00000636183 STARD3NLO95772 234 aa19.16■□□□□ 0.66
CLN5-208ENST00000636183 PSMD1Q99460 953 aa19.16■□□□□ 0.66
CLN5-208ENST00000636183 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
CLN5-208ENST00000636183 NAT10Q9H0A0 1025 aaKnown RBP19.15■□□□□ 0.66
CLN5-208ENST00000636183 LIG1P18858 919 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 IFT57Q9NWB7 429 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 MYO6Q9UM54 1294 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 CFAP70Q5T0N1 1121 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 MNS1Q8NEH6 495 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 PANK1Q8TE04 598 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
CLN5-208ENST00000636183 SLC4A2P04920 1241 aa19.14■□□□□ 0.66
CLN5-208ENST00000636183 POLR3DP05423 398 aaPredicted RBP19.14■□□□□ 0.66
CLN5-208ENST00000636183 CHMP5Q9NZZ3 219 aa19.14■□□□□ 0.65
CLN5-208ENST00000636183 SMC2O95347 1197 aa19.14■□□□□ 0.65
CLN5-208ENST00000636183 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
CLN5-208ENST00000636183 DESP17661 470 aa19.14■□□□□ 0.65
CLN5-208ENST00000636183 FILIP1LQ4L180 1135 aa19.14■□□□□ 0.65
CLN5-208ENST00000636183 TRIM22Q8IYM9 498 aa19.14■□□□□ 0.65
CLN5-208ENST00000636183 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
CLN5-208ENST00000636183 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
CLN5-208ENST00000636183 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
CLN5-208ENST00000636183 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
CLN5-208ENST00000636183 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms