RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FOXC1Q12948 553 aa7.42□□□□□ -1.22
SRP54-214ENST00000630962 BANK1Q8NDB2 785 aa7.42□□□□□ -1.22
SRP54-214ENST00000630962 SOCS7O14512 581 aa7.41□□□□□ -1.22
SRP54-214ENST00000630962 VARSP26640 1264 aaKnown RBP7.41□□□□□ -1.22
SRP54-214ENST00000630962 RC3H1Q5TC82 1133 aaKnown RBP7.41□□□□□ -1.22
SRP54-214ENST00000630962 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
SRP54-214ENST00000630962 ZNF511Q8NB15 262 aa7.41□□□□□ -1.22
SRP54-214ENST00000630962 SNIP1Q8TAD8 396 aaKnown RBP7.41□□□□□ -1.22
SRP54-214ENST00000630962 PKD2L1Q9P0L9 805 aa7.41□□□□□ -1.22
SRP54-214ENST00000630962 TTC24A2A3L6 582 aaPredicted RBP7.4□□□□□ -1.22
SRP54-214ENST00000630962 CTDSPL2Q05D32 466 aa7.4□□□□□ -1.22
SRP54-214ENST00000630962 PKDCCQ504Y2 493 aa7.4□□□□□ -1.22
SRP54-214ENST00000630962 Q6ZNB5 142 aa7.4□□□□□ -1.22
SRP54-214ENST00000630962 BPHLQ86WA6 291 aaPredicted RBP7.4□□□□□ -1.22
SRP54-214ENST00000630962 EHBP1Q8NDI1 1231 aa7.4□□□□□ -1.22
SRP54-214ENST00000630962 PER1O15534 1290 aaPredicted RBP7.39□□□□□ -1.23
SRP54-214ENST00000630962 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
SRP54-214ENST00000630962 MPNDQ8N594 471 aa7.39□□□□□ -1.23
SRP54-214ENST00000630962 MAP10Q9P2G4 905 aa7.39□□□□□ -1.23
SRP54-214ENST00000630962 SH3BP2P78314 561 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 FAM174AQ8TBP5 190 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 BAP1Q92560 729 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 MRGPRX2Q96LB1 330 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 TOR4AQ9NXH8 423 aa7.38□□□□□ -1.23
SRP54-214ENST00000630962 TNFRSF10AO00220 468 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 USP17L8P0C7I0 530 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 SKOR1P84550 965 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 AGERQ15109 404 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 FKBPLQ9UIM3 349 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 GPSM3Q9Y4H4 160 aa7.37□□□□□ -1.23
SRP54-214ENST00000630962 PDXDC2PQ6P474 469 aa7.36□□□□□ -1.23
SRP54-214ENST00000630962 FAM187AA6NFU0 413 aa7.35□□□□□ -1.23
SRP54-214ENST00000630962 CTC1Q2NKJ3 1217 aa7.35□□□□□ -1.23
SRP54-214ENST00000630962 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
SRP54-214ENST00000630962 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
SRP54-214ENST00000630962 PTK2Q05397 1052 aa7.34□□□□□ -1.23
SRP54-214ENST00000630962 TMEM132AQ24JP5 1023 aa7.34□□□□□ -1.23
SRP54-214ENST00000630962 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
SRP54-214ENST00000630962 TRAF7Q6Q0C0 670 aa7.34□□□□□ -1.23
SRP54-214ENST00000630962 LRRN4Q8WUT4 740 aa7.34□□□□□ -1.23
SRP54-214ENST00000630962 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
SRP54-214ENST00000630962 WASF2Q9Y6W5 498 aa7.33□□□□□ -1.24
SRP54-214ENST00000630962 SIAH2O43255 324 aa7.32□□□□□ -1.24
SRP54-214ENST00000630962 AVPP01185 164 aa7.32□□□□□ -1.24
SRP54-214ENST00000630962 NR6A1Q15406 480 aa7.32□□□□□ -1.24
SRP54-214ENST00000630962 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
SRP54-214ENST00000630962 FBXO31Q5XUX0 539 aaPredicted RBP7.31□□□□□ -1.24
SRP54-214ENST00000630962 SH3BP5LQ7L8J4 393 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 SH3RF1Q7Z6J0 888 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 CRIPAKQ8N1N5 446 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 CDK15Q96Q40 435 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
SRP54-214ENST00000630962 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
SRP54-214ENST00000630962 NR5A1Q13285 461 aa7.3□□□□□ -1.24
SRP54-214ENST00000630962 ZBTB33Q86T24 672 aa7.3□□□□□ -1.24
SRP54-214ENST00000630962 TRMT44Q8IYL2 757 aaKnown RBP7.3□□□□□ -1.24
SRP54-214ENST00000630962 ZNF330Q9Y3S2 320 aaPredicted RBP7.3□□□□□ -1.24
SRP54-214ENST00000630962 MAP4K5Q9Y4K4 846 aa7.3□□□□□ -1.24
SRP54-214ENST00000630962 SMPD1P17405 629 aa7.29□□□□□ -1.24
SRP54-214ENST00000630962 CCDC125Q86Z20 511 aa7.29□□□□□ -1.24
SRP54-214ENST00000630962 FOXJ1Q92949 421 aa7.29□□□□□ -1.24
SRP54-214ENST00000630962 C1QTNF2Q9BXJ5 285 aa7.29□□□□□ -1.24
SRP54-214ENST00000630962 NDUFB9Q9Y6M9 179 aa7.29□□□□□ -1.24
SRP54-214ENST00000630962 ADH1CP00326 375 aa7.28□□□□□ -1.24
SRP54-214ENST00000630962 MYT1Q01538 1121 aa7.28□□□□□ -1.24
SRP54-214ENST00000630962 MAGEB6P1A0A0J9YX57 407 aa7.27□□□□□ -1.25
SRP54-214ENST00000630962 AXIN1O15169 862 aa7.27□□□□□ -1.25
SRP54-214ENST00000630962 SLC10A4Q96EP9 437 aa7.27□□□□□ -1.25
SRP54-214ENST00000630962 HMX1Q9NP08 348 aaPredicted RBP7.27□□□□□ -1.25
SRP54-214ENST00000630962 J3QL48 77 aa7.26□□□□□ -1.25
SRP54-214ENST00000630962 FLIIQ13045 1269 aa7.26□□□□□ -1.25
SRP54-214ENST00000630962 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
SRP54-214ENST00000630962 VASH1Q7L8A9 365 aaPredicted RBP7.26□□□□□ -1.25
SRP54-214ENST00000630962 TRIM34Q9BYJ4 488 aa7.26□□□□□ -1.25
SRP54-214ENST00000630962 ZBBXA8MT70 800 aa7.25□□□□□ -1.25
SRP54-214ENST00000630962 DHX9Q08211 1270 aaKnown RBP7.25□□□□□ -1.25
SRP54-214ENST00000630962 ERFEQ4G0M1 354 aa7.25□□□□□ -1.25
SRP54-214ENST00000630962 GJD4Q96KN9 370 aaPredicted RBP7.25□□□□□ -1.25
SRP54-214ENST00000630962 ARID5BQ14865 1188 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 MTMR14Q8NCE2 650 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 CARD14Q9BXL6 1004 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 TLL2Q9Y6L7 1015 aa7.24□□□□□ -1.25
SRP54-214ENST00000630962 NNTQ13423 1086 aa7.23□□□□□ -1.25
SRP54-214ENST00000630962 DZIP3Q86Y13 1208 aaKnown RBP7.23□□□□□ -1.25
SRP54-214ENST00000630962 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
SRP54-214ENST00000630962 AAASQ9NRG9 546 aa7.23□□□□□ -1.25
SRP54-214ENST00000630962 SEPT12Q8IYM1 358 aa7.22□□□□□ -1.25
SRP54-214ENST00000630962 ADAM32Q8TC27 787 aa7.22□□□□□ -1.25
SRP54-214ENST00000630962 SENP2Q9HC62 589 aa7.22□□□□□ -1.25
SRP54-214ENST00000630962 SNRKQ9NRH2 765 aa7.22□□□□□ -1.25
SRP54-214ENST00000630962 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
SRP54-214ENST00000630962 CAPN5O15484 640 aaPredicted RBP7.21□□□□□ -1.26
SRP54-214ENST00000630962 NR1H3Q13133 447 aa7.21□□□□□ -1.26
SRP54-214ENST00000630962 HPS1Q92902 700 aa7.21□□□□□ -1.26
SRP54-214ENST00000630962 KIFC2Q96AC6 838 aa7.21□□□□□ -1.26
SRP54-214ENST00000630962 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms