RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
VBP1-204ENST00000625964 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 TMEM151AQ8N4L1 468 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 RNF225M0QZC1 329 aaPredicted RBP8.85□□□□□ -0.99
VBP1-204ENST00000625964 MAN1A2O60476 641 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 GSK3AP49840 483 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
VBP1-204ENST00000625964 SOBPA7XYQ1 873 aa8.84□□□□□ -0.99
VBP1-204ENST00000625964 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
VBP1-204ENST00000625964 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
VBP1-204ENST00000625964 PPFIA3O75145 1194 aa8.83□□□□□ -1
VBP1-204ENST00000625964 CCDC102AQ96A19 550 aa8.83□□□□□ -1
VBP1-204ENST00000625964 PRR7Q8TB68 274 aa8.82□□□□□ -1
VBP1-204ENST00000625964 UPP2O95045 317 aa8.81□□□□□ -1
VBP1-204ENST00000625964 NR5A1Q13285 461 aa8.81□□□□□ -1
VBP1-204ENST00000625964 GDF11O95390 407 aa8.8□□□□□ -1
VBP1-204ENST00000625964 ZIC2O95409 532 aaPredicted RBP8.8□□□□□ -1
VBP1-204ENST00000625964 PLCB2Q00722 1185 aa8.8□□□□□ -1
VBP1-204ENST00000625964 RASSF7Q02833 373 aa8.8□□□□□ -1
VBP1-204ENST00000625964 MTMR2Q13614 643 aa8.8□□□□□ -1
VBP1-204ENST00000625964 SPIRE2Q8WWL2 714 aa8.8□□□□□ -1
VBP1-204ENST00000625964 SPTLC1O15269 473 aa8.78□□□□□ -1
VBP1-204ENST00000625964 BMP2P12643 396 aa8.77□□□□□ -1.01
VBP1-204ENST00000625964 C6orf118Q5T5N4 469 aa8.77□□□□□ -1.01
VBP1-204ENST00000625964 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
VBP1-204ENST00000625964 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
VBP1-204ENST00000625964 SSTR3P32745 418 aaPredicted RBP8.76□□□□□ -1.01
VBP1-204ENST00000625964 GJA5P36382 358 aa8.76□□□□□ -1.01
VBP1-204ENST00000625964 ITPKCQ96DU7 683 aa8.76□□□□□ -1.01
VBP1-204ENST00000625964 MOXD2PA6NHM9 499 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 NDUFV2P19404 249 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 CTHP32929 405 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 ARID5BQ14865 1188 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 SOS2Q07890 1332 aaPredicted RBP8.75□□□□□ -1.01
VBP1-204ENST00000625964 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
VBP1-204ENST00000625964 IGHA1P01876 353 aa8.73□□□□□ -1.01
VBP1-204ENST00000625964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
VBP1-204ENST00000625964 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
VBP1-204ENST00000625964 NR3C2P08235 984 aa8.72□□□□□ -1.01
VBP1-204ENST00000625964 GRM5P41594 1212 aa8.72□□□□□ -1.01
VBP1-204ENST00000625964 BPHLQ86WA6 291 aaPredicted RBP8.72□□□□□ -1.01
VBP1-204ENST00000625964 CNTNAP3BQ96NU0 1288 aa8.72□□□□□ -1.01
VBP1-204ENST00000625964 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
VBP1-204ENST00000625964 CNTNAP3Q9BZ76 1288 aa8.72□□□□□ -1.01
VBP1-204ENST00000625964 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
VBP1-204ENST00000625964 KRT76Q01546 638 aa8.71□□□□□ -1.01
VBP1-204ENST00000625964 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.01
VBP1-204ENST00000625964 NANOS1Q8WY41 292 aaKnown RBP8.71□□□□□ -1.01
VBP1-204ENST00000625964 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
VBP1-204ENST00000625964 AGERQ15109 404 aa8.7□□□□□ -1.02
VBP1-204ENST00000625964 F12P00748 615 aaPredicted RBP8.7□□□□□ -1.02
VBP1-204ENST00000625964 FOXK2Q01167 660 aa8.7□□□□□ -1.02
VBP1-204ENST00000625964 XP32Q5T750 250 aa8.7□□□□□ -1.02
VBP1-204ENST00000625964 GPR161Q8N6U8 529 aaKnown RBP8.7□□□□□ -1.02
VBP1-204ENST00000625964 DNMT3AQ9Y6K1 912 aaPredicted RBP8.7□□□□□ -1.02
VBP1-204ENST00000625964 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
VBP1-204ENST00000625964 ZNF385CQ66K41 422 aaPredicted RBP8.68□□□□□ -1.02
VBP1-204ENST00000625964 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
VBP1-204ENST00000625964 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
VBP1-204ENST00000625964 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
VBP1-204ENST00000625964 KANK3Q6NY19 840 aa8.67□□□□□ -1.02
VBP1-204ENST00000625964 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
VBP1-204ENST00000625964 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
VBP1-204ENST00000625964 PTSQ03393 145 aa8.66□□□□□ -1.02
VBP1-204ENST00000625964 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
VBP1-204ENST00000625964 SLURP2P0DP57 97 aa8.65□□□□□ -1.02
VBP1-204ENST00000625964 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
VBP1-204ENST00000625964 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
VBP1-204ENST00000625964 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
VBP1-204ENST00000625964 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
VBP1-204ENST00000625964 CFAP99D6REC4 459 aa8.64□□□□□ -1.03
VBP1-204ENST00000625964 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
VBP1-204ENST00000625964 TTLL12Q14166 644 aaPredicted RBP8.64□□□□□ -1.03
VBP1-204ENST00000625964 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
VBP1-204ENST00000625964 ARHGEF15O94989 841 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 HRCP23327 699 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 MARSP56192 900 aaKnown RBP8.63□□□□□ -1.03
VBP1-204ENST00000625964 AMHR2Q16671 573 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
VBP1-204ENST00000625964 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 SCARF2Q96GP6 870 aaPredicted RBP8.63□□□□□ -1.03
VBP1-204ENST00000625964 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
VBP1-204ENST00000625964 FSHRP23945 695 aa8.62□□□□□ -1.03
VBP1-204ENST00000625964 IRS1P35568 1242 aa8.62□□□□□ -1.03
VBP1-204ENST00000625964 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
VBP1-204ENST00000625964 SLC35F4A4IF30 521 aa8.61□□□□□ -1.03
VBP1-204ENST00000625964 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
VBP1-204ENST00000625964 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
VBP1-204ENST00000625964 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
VBP1-204ENST00000625964 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
VBP1-204ENST00000625964 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
VBP1-204ENST00000625964 SPINT1O43278 529 aa8.59□□□□□ -1.03
VBP1-204ENST00000625964 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms