RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	DDRGK1	Q96HY6	314 aa		12	□□□□□ -0.49
NRXN1-223	ENST00000625891	UNC93B1	Q9H1C4	597 aa		12	□□□□□ -0.49
NRXN1-223	ENST00000625891	KCNH2	Q12809	1159 aa		11.98	□□□□□ -0.49
NRXN1-223	ENST00000625891	PRR7	Q8TB68	274 aa		11.98	□□□□□ -0.49
NRXN1-223	ENST00000625891	BAP1	Q92560	729 aa		11.98	□□□□□ -0.49
NRXN1-223	ENST00000625891	NXF1	Q9UBU9	619 aa	Known RBP	11.98	□□□□□ -0.49
NRXN1-223	ENST00000625891	LINC01559	Q495D7	138 aa		11.97	□□□□□ -0.49
NRXN1-223	ENST00000625891	SLC16A10	Q8TF71	515 aa		11.97	□□□□□ -0.49
NRXN1-223	ENST00000625891	DESI1	Q6ICB0	168 aa		11.96	□□□□□ -0.49
NRXN1-223	ENST00000625891	MTMR2	Q13614	643 aa		11.95	□□□□□ -0.5
NRXN1-223	ENST00000625891	SPDYE5	A6NIY4	337 aa		11.94	□□□□□ -0.5
NRXN1-223	ENST00000625891	ZNF511	Q8NB15	262 aa		11.94	□□□□□ -0.5
NRXN1-223	ENST00000625891	BEGAIN	Q9BUH8	593 aa		11.94	□□□□□ -0.5
NRXN1-223	ENST00000625891	TLL2	Q9Y6L7	1015 aa		11.94	□□□□□ -0.5
NRXN1-223	ENST00000625891	VARS	P26640	1264 aa	Known RBP	11.93	□□□□□ -0.5
NRXN1-223	ENST00000625891	NPAS3	Q8IXF0	933 aa		11.93	□□□□□ -0.5
NRXN1-223	ENST00000625891	MPND	Q8N594	471 aa		11.93	□□□□□ -0.5
NRXN1-223	ENST00000625891	GJA5	P36382	358 aa		11.9	□□□□□ -0.5
NRXN1-223	ENST00000625891	GMPR	P36959	345 aa		11.9	□□□□□ -0.5
NRXN1-223	ENST00000625891	ZFP42	Q96MM3	310 aa		11.9	□□□□□ -0.5
NRXN1-223	ENST00000625891	NNT	Q13423	1086 aa		11.89	□□□□□ -0.51
NRXN1-223	ENST00000625891	IRF7	Q92985	503 aa		11.89	□□□□□ -0.51
NRXN1-223	ENST00000625891	LYPD8	Q6UX82	237 aa		11.88	□□□□□ -0.51
NRXN1-223	ENST00000625891	GOPC	Q9HD26	462 aa		11.88	□□□□□ -0.51
NRXN1-223	ENST00000625891		H3BM21	787 aa		11.87	□□□□□ -0.51
NRXN1-223	ENST00000625891	VEGFB	P49765	207 aa		11.87	□□□□□ -0.51
NRXN1-223	ENST00000625891	TBC1D2	Q9BYX2	928 aa		11.87	□□□□□ -0.51
NRXN1-223	ENST00000625891	LOR	P23490	312 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-223	ENST00000625891	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-223	ENST00000625891	PCDHB15	Q9Y5E8	787 aa		11.86	□□□□□ -0.51
NRXN1-223	ENST00000625891	TIMP2	P16035	220 aa		11.85	□□□□□ -0.51
NRXN1-223	ENST00000625891	CTH	P32929	405 aa		11.85	□□□□□ -0.51
NRXN1-223	ENST00000625891	SH3D19	Q5HYK7	790 aa		11.85	□□□□□ -0.51
NRXN1-223	ENST00000625891	MRPL14	Q6P1L8	145 aa	Known RBP	11.85	□□□□□ -0.51
NRXN1-223	ENST00000625891	CFAP99	D6REC4	459 aa		11.84	□□□□□ -0.51
NRXN1-223	ENST00000625891	DIXDC1	Q155Q3	683 aa		11.84	□□□□□ -0.51
NRXN1-223	ENST00000625891	KLF16	Q9BXK1	252 aa	Predicted RBP	11.84	□□□□□ -0.51
NRXN1-223	ENST00000625891	ADH1C	P00326	375 aa		11.83	□□□□□ -0.52
NRXN1-223	ENST00000625891	WDR4	P57081	412 aa	Known RBP	11.83	□□□□□ -0.52
NRXN1-223	ENST00000625891	MYSM1	Q5VVJ2	828 aa		11.83	□□□□□ -0.52
NRXN1-223	ENST00000625891	FAM174A	Q8TBP5	190 aa		11.83	□□□□□ -0.52
NRXN1-223	ENST00000625891	ERBB4	Q15303	1308 aa		11.83	□□□□□ -0.52
NRXN1-223	ENST00000625891	FAM181B	A6NEQ2	426 aa		11.82	□□□□□ -0.52
NRXN1-223	ENST00000625891	SPTLC1	O15269	473 aa		11.82	□□□□□ -0.52
NRXN1-223	ENST00000625891	SCARF1	Q14162	830 aa		11.82	□□□□□ -0.52
NRXN1-223	ENST00000625891	ZSCAN1	Q8NBB4	408 aa		11.82	□□□□□ -0.52
NRXN1-223	ENST00000625891	CDK15	Q96Q40	435 aa		11.82	□□□□□ -0.52
NRXN1-223	ENST00000625891	F12	P00748	615 aa	Predicted RBP	11.81	□□□□□ -0.52
NRXN1-223	ENST00000625891	HRC	P23327	699 aa		11.81	□□□□□ -0.52
NRXN1-223	ENST00000625891	FOXJ1	Q92949	421 aa		11.81	□□□□□ -0.52
NRXN1-223	ENST00000625891	PURB	Q96QR8	312 aa	Known RBP	11.81	□□□□□ -0.52
NRXN1-223	ENST00000625891	RSPH6A	Q9H0K4	717 aa		11.81	□□□□□ -0.52
NRXN1-223	ENST00000625891	SKIV2L	Q15477	1246 aa	Known RBP	11.8	□□□□□ -0.52
NRXN1-223	ENST00000625891	ZBTB3	Q9H5J0	574 aa		11.8	□□□□□ -0.52
NRXN1-223	ENST00000625891	MAP10	Q9P2G4	905 aa		11.8	□□□□□ -0.52
NRXN1-223	ENST00000625891	GTF3C3	Q9Y5Q9	886 aa		11.79	□□□□□ -0.52
NRXN1-223	ENST00000625891	PRPF38B	Q5VTL8	546 aa	Known RBP	11.77	□□□□□ -0.53
NRXN1-223	ENST00000625891	RIC3	Q7Z5B4	369 aa		11.77	□□□□□ -0.53
NRXN1-223	ENST00000625891	SOBP	A7XYQ1	873 aa		11.76	□□□□□ -0.53
NRXN1-223	ENST00000625891	ARID5B	Q14865	1188 aa		11.76	□□□□□ -0.53
NRXN1-223	ENST00000625891	CABLES1	Q8TDN4	633 aa		11.76	□□□□□ -0.53
NRXN1-223	ENST00000625891	C4orf48	Q5BLP8	95 aa		11.75	□□□□□ -0.53
NRXN1-223	ENST00000625891	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
NRXN1-223	ENST00000625891	POLR3E	Q9NVU0	708 aa		11.75	□□□□□ -0.53
NRXN1-223	ENST00000625891	PER1	O15534	1290 aa	Predicted RBP	11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	ZIC2	O95409	532 aa	Predicted RBP	11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	CLK2	P49760	499 aa	Known RBP	11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	NR5A1	Q13285	461 aa		11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	ITPKC	Q96DU7	683 aa		11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	ZFAND3	Q9H8U3	227 aa		11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	LIMD1	Q9UGP4	676 aa		11.74	□□□□□ -0.53
NRXN1-223	ENST00000625891	NR3C2	P08235	984 aa		11.73	□□□□□ -0.53
NRXN1-223	ENST00000625891	GRM5	P41594	1212 aa		11.73	□□□□□ -0.53
NRXN1-223	ENST00000625891	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.73	□□□□□ -0.53
NRXN1-223	ENST00000625891	VSIG8	P0DPA2	414 aa		11.72	□□□□□ -0.53
NRXN1-223	ENST00000625891	TUSC1	Q2TAM9	212 aa		11.72	□□□□□ -0.53
NRXN1-223	ENST00000625891	AGER	Q15109	404 aa		11.71	□□□□□ -0.53
NRXN1-223	ENST00000625891	CSPP1	Q1MSJ5	1256 aa		11.71	□□□□□ -0.53
NRXN1-223	ENST00000625891	BPHL	Q86WA6	291 aa	Predicted RBP	11.71	□□□□□ -0.53
NRXN1-223	ENST00000625891	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.7	□□□□□ -0.54
NRXN1-223	ENST00000625891	C6orf118	Q5T5N4	469 aa		11.69	□□□□□ -0.54
NRXN1-223	ENST00000625891	MAN1A2	O60476	641 aa		11.68	□□□□□ -0.54
NRXN1-223	ENST00000625891	QPCT	Q16769	361 aa		11.67	□□□□□ -0.54
NRXN1-223	ENST00000625891	C1QTNF2	Q9BXJ5	285 aa		11.67	□□□□□ -0.54
NRXN1-223	ENST00000625891	ARMC2	Q8NEN0	867 aa		11.66	□□□□□ -0.54
NRXN1-223	ENST00000625891	TSC1	Q92574	1164 aa		11.66	□□□□□ -0.54
NRXN1-223	ENST00000625891	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	NUTM2E	B1AL46	878 aa	Predicted RBP	11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	LILRB3	O75022	631 aa		11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	PPP2R2D	Q66LE6	453 aa		11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	SH3RF1	Q7Z6J0	888 aa		11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	MEIOB	Q8N635	442 aa		11.65	□□□□□ -0.54
NRXN1-223	ENST00000625891	BMP2	P12643	396 aa		11.64	□□□□□ -0.55
NRXN1-223	ENST00000625891	LINC00528	Q8N1L1	170 aa		11.64	□□□□□ -0.55
NRXN1-223	ENST00000625891	PPFIA3	O75145	1194 aa		11.63	□□□□□ -0.55
NRXN1-223	ENST00000625891	UPP2	O95045	317 aa		11.63	□□□□□ -0.55
NRXN1-223	ENST00000625891	MAP4K5	Q9Y4K4	846 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms