RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
PMS1-221ENST00000624204 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
PMS1-221ENST00000624204 NUCB1Q02818 461 aa18.76■□□□□ 0.59
PMS1-221ENST00000624204 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
PMS1-221ENST00000624204 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
PMS1-221ENST00000624204 TBC1D9Q6ZT07 1266 aa18.75■□□□□ 0.59
PMS1-221ENST00000624204 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
PMS1-221ENST00000624204 PKP1Q13835 747 aa18.74■□□□□ 0.59
PMS1-221ENST00000624204 CFAP70Q5T0N1 1121 aa18.74■□□□□ 0.59
PMS1-221ENST00000624204 SASS6Q6UVJ0 657 aa18.74■□□□□ 0.59
PMS1-221ENST00000624204 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
PMS1-221ENST00000624204 BMP2KLQ5H9B9 411 aa18.73■□□□□ 0.59
PMS1-221ENST00000624204 SYCE3A1L190 88 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
PMS1-221ENST00000624204 RSPH4AQ5TD94 716 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 JPH4Q96JJ6 628 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 PDLIM2Q96JY6 352 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
PMS1-221ENST00000624204 CBX1P83916 185 aa18.71■□□□□ 0.59
PMS1-221ENST00000624204 ZNF830Q96NB3 372 aaPredicted RBP18.71■□□□□ 0.59
PMS1-221ENST00000624204 SLC12A5Q9H2X9 1139 aa18.71■□□□□ 0.59
PMS1-221ENST00000624204 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
PMS1-221ENST00000624204 NUCB2P80303 420 aa18.71■□□□□ 0.59
PMS1-221ENST00000624204 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
PMS1-221ENST00000624204 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
PMS1-221ENST00000624204 SCAPERQ9BY12 1400 aa18.7■□□□□ 0.58
PMS1-221ENST00000624204 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
PMS1-221ENST00000624204 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
PMS1-221ENST00000624204 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
PMS1-221ENST00000624204 ATP10BO94823 1461 aa18.68■□□□□ 0.58
PMS1-221ENST00000624204 CCDC27Q2M243 656 aa18.68■□□□□ 0.58
PMS1-221ENST00000624204 C17orf53Q8N3J3 647 aaPredicted RBP18.68■□□□□ 0.58
PMS1-221ENST00000624204 GPT2Q8TD30 523 aa18.67■□□□□ 0.58
PMS1-221ENST00000624204 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
PMS1-221ENST00000624204 IPO8O15397 1037 aaKnown RBP18.67■□□□□ 0.58
PMS1-221ENST00000624204 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
PMS1-221ENST00000624204 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
PMS1-221ENST00000624204 TRAK1Q9UPV9 953 aa18.66■□□□□ 0.58
PMS1-221ENST00000624204 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
PMS1-221ENST00000624204 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 MCM5P33992 734 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 MYOM1P52179 1685 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 ARHGEF5Q12774 1597 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 DMTNQ08495 405 aa18.65■□□□□ 0.58
PMS1-221ENST00000624204 DTNBO60941 627 aa18.64■□□□□ 0.57
PMS1-221ENST00000624204 CDC45O75419 566 aa18.64■□□□□ 0.57
PMS1-221ENST00000624204 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
PMS1-221ENST00000624204 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
PMS1-221ENST00000624204 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
PMS1-221ENST00000624204 RABEP1Q15276 862 aa18.63■□□□□ 0.57
PMS1-221ENST00000624204 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
PMS1-221ENST00000624204 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
PMS1-221ENST00000624204 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
PMS1-221ENST00000624204 SYCP2Q9BX26 1530 aa18.63■□□□□ 0.57
PMS1-221ENST00000624204 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
PMS1-221ENST00000624204 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
PMS1-221ENST00000624204 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
PMS1-221ENST00000624204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.62■□□□□ 0.57
PMS1-221ENST00000624204 MADDQ8WXG6 1647 aa18.61■□□□□ 0.57
PMS1-221ENST00000624204 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
PMS1-221ENST00000624204 KANK1Q14678 1352 aa18.61■□□□□ 0.57
PMS1-221ENST00000624204 GDPD2Q9HCC8 539 aa18.6■□□□□ 0.57
PMS1-221ENST00000624204 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
PMS1-221ENST00000624204 FGD1P98174 961 aa18.6■□□□□ 0.57
PMS1-221ENST00000624204 MYRIPQ8NFW9 859 aa18.59■□□□□ 0.57
PMS1-221ENST00000624204 PPP4R3BQ5MIZ7 849 aa18.59■□□□□ 0.57
PMS1-221ENST00000624204 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
PMS1-221ENST00000624204 UNC13BO14795 1591 aa18.58■□□□□ 0.57
PMS1-221ENST00000624204 ADGRF5Q8IZF2 1346 aa18.58■□□□□ 0.57
PMS1-221ENST00000624204 UTP14CQ5TAP6 766 aaKnown RBP18.58■□□□□ 0.56
PMS1-221ENST00000624204 ATP10AO60312 1499 aa18.58■□□□□ 0.56
PMS1-221ENST00000624204 ST18O60284 1047 aa18.57■□□□□ 0.56
PMS1-221ENST00000624204 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
PMS1-221ENST00000624204 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
PMS1-221ENST00000624204 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
PMS1-221ENST00000624204 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
PMS1-221ENST00000624204 TRIM35Q9UPQ4 493 aa18.56■□□□□ 0.56
PMS1-221ENST00000624204 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
PMS1-221ENST00000624204 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
PMS1-221ENST00000624204 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
PMS1-221ENST00000624204 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
PMS1-221ENST00000624204 ZNF710Q8N1W2 664 aa18.55■□□□□ 0.56
PMS1-221ENST00000624204 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
PMS1-221ENST00000624204 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
PMS1-221ENST00000624204 CEP152O94986 1710 aa18.55■□□□□ 0.56
PMS1-221ENST00000624204 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
PMS1-221ENST00000624204 TTC12Q9H892 705 aaPredicted RBP18.55■□□□□ 0.56
PMS1-221ENST00000624204 PPIP5K1Q6PFW1 1433 aa18.54■□□□□ 0.56
PMS1-221ENST00000624204 ATP2B3Q16720 1220 aa18.54■□□□□ 0.56
PMS1-221ENST00000624204 ABCA8O94911 1581 aa18.54■□□□□ 0.56
PMS1-221ENST00000624204 FBLN1P23142 703 aa18.54■□□□□ 0.56
PMS1-221ENST00000624204 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
PMS1-221ENST00000624204 BBXQ8WY36 941 aaPredicted RBP18.54■□□□□ 0.56
PMS1-221ENST00000624204 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
PMS1-221ENST00000624204 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
PMS1-221ENST00000624204 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms