RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 PXDNQ92626 1479 aa17.13■□□□□ 0.33
LINC00963-216ENST00000623185 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
LINC00963-216ENST00000623185 EDC4Q6P2E9 1401 aaKnown RBP17.13■□□□□ 0.33
LINC00963-216ENST00000623185 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
LINC00963-216ENST00000623185 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
LINC00963-216ENST00000623185 FYB1O15117 783 aa17.11■□□□□ 0.33
LINC00963-216ENST00000623185 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
LINC00963-216ENST00000623185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC00963-216ENST00000623185 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
LINC00963-216ENST00000623185 NLRP6P59044 892 aa17.09■□□□□ 0.33
LINC00963-216ENST00000623185 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
LINC00963-216ENST00000623185 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
LINC00963-216ENST00000623185 NHSL1Q5SYE7 1610 aa17.09■□□□□ 0.33
LINC00963-216ENST00000623185 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
LINC00963-216ENST00000623185 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
LINC00963-216ENST00000623185 JCADQ9P266 1359 aa17.07■□□□□ 0.32
LINC00963-216ENST00000623185 NME9Q86XW9 330 aa17.07■□□□□ 0.32
LINC00963-216ENST00000623185 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
LINC00963-216ENST00000623185 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
LINC00963-216ENST00000623185 MYOM1P52179 1685 aa17.05■□□□□ 0.32
LINC00963-216ENST00000623185 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
LINC00963-216ENST00000623185 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 COG3Q96JB2 828 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
LINC00963-216ENST00000623185 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
LINC00963-216ENST00000623185 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
LINC00963-216ENST00000623185 GCP02774 474 aa17.03■□□□□ 0.32
LINC00963-216ENST00000623185 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
LINC00963-216ENST00000623185 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
LINC00963-216ENST00000623185 NSD2O96028 1365 aa17.02■□□□□ 0.31
LINC00963-216ENST00000623185 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
LINC00963-216ENST00000623185 USP19O94966 1318 aa17.01■□□□□ 0.31
LINC00963-216ENST00000623185 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
LINC00963-216ENST00000623185 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
LINC00963-216ENST00000623185 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-216ENST00000623185 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
LINC00963-216ENST00000623185 ALS2Q96Q42 1657 aa16.97■□□□□ 0.31
LINC00963-216ENST00000623185 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
LINC00963-216ENST00000623185 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
LINC00963-216ENST00000623185 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.31
LINC00963-216ENST00000623185 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.31
LINC00963-216ENST00000623185 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-216ENST00000623185 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-216ENST00000623185 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-216ENST00000623185 ARHGEF25Q86VW2 580 aa16.95■□□□□ 0.3
LINC00963-216ENST00000623185 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
LINC00963-216ENST00000623185 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
LINC00963-216ENST00000623185 RALBP1Q15311 655 aa16.94■□□□□ 0.3
LINC00963-216ENST00000623185 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
LINC00963-216ENST00000623185 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
LINC00963-216ENST00000623185 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
LINC00963-216ENST00000623185 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
LINC00963-216ENST00000623185 CPDO75976 1380 aa16.92■□□□□ 0.3
LINC00963-216ENST00000623185 MED1Q15648 1581 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-216ENST00000623185 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
LINC00963-216ENST00000623185 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
LINC00963-216ENST00000623185 FBLN1P23142 703 aa16.91■□□□□ 0.3
LINC00963-216ENST00000623185 SLIT3O75094 1523 aa16.91■□□□□ 0.3
LINC00963-216ENST00000623185 SOX12O15370 315 aa16.9■□□□□ 0.3
LINC00963-216ENST00000623185 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
LINC00963-216ENST00000623185 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
LINC00963-216ENST00000623185 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
LINC00963-216ENST00000623185 IP6K1Q92551 441 aa16.89■□□□□ 0.29
LINC00963-216ENST00000623185 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
LINC00963-216ENST00000623185 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
LINC00963-216ENST00000623185 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
LINC00963-216ENST00000623185 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
LINC00963-216ENST00000623185 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
LINC00963-216ENST00000623185 NGLY1Q96IV0 654 aa16.88■□□□□ 0.29
LINC00963-216ENST00000623185 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
LINC00963-216ENST00000623185 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
LINC00963-216ENST00000623185 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
LINC00963-216ENST00000623185 AMPHP49418 695 aa16.87■□□□□ 0.29
LINC00963-216ENST00000623185 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
LINC00963-216ENST00000623185 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
LINC00963-216ENST00000623185 ANP32CO43423 234 aa16.86■□□□□ 0.29
LINC00963-216ENST00000623185 PPP2R1AP30153 589 aa16.86■□□□□ 0.29
LINC00963-216ENST00000623185 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
LINC00963-216ENST00000623185 HOXC9P31274 260 aa16.85■□□□□ 0.29
LINC00963-216ENST00000623185 MTHFSP49914 203 aa16.85■□□□□ 0.29
LINC00963-216ENST00000623185 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
LINC00963-216ENST00000623185 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
LINC00963-216ENST00000623185 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
LINC00963-216ENST00000623185 NFAT5O94916 1531 aa16.85■□□□□ 0.29
LINC00963-216ENST00000623185 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
LINC00963-216ENST00000623185 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
LINC00963-216ENST00000623185 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
LINC00963-216ENST00000623185 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
LINC00963-216ENST00000623185 PPM1GO15355 546 aaPredicted RBP16.83■□□□□ 0.28
LINC00963-216ENST00000623185 LRP6O75581 1613 aa16.83■□□□□ 0.28
LINC00963-216ENST00000623185 MARF1Q9Y4F3 1742 aaKnown RBP16.83■□□□□ 0.28
LINC00963-216ENST00000623185 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
LINC00963-216ENST00000623185 EVA1CP58658 441 aa16.82■□□□□ 0.28
LINC00963-216ENST00000623185 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
LINC00963-216ENST00000623185 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
LINC00963-216ENST00000623185 INSRP06213 1382 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms