RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
CLTC-215ENST00000621829 C16orf45Q96MC5 204 aaPredicted RBP13.75□□□□□ -0.21
CLTC-215ENST00000621829 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
CLTC-215ENST00000621829 FHAD1B1AJZ9 1412 aa13.75□□□□□ -0.21
CLTC-215ENST00000621829 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
CLTC-215ENST00000621829 DYNC1I1O14576 645 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 EZRP15311 586 aaKnown RBP13.74□□□□□ -0.21
CLTC-215ENST00000621829 FAM107BQ9H098 131 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
CLTC-215ENST00000621829 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
CLTC-215ENST00000621829 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 PSMA5P28066 241 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
CLTC-215ENST00000621829 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 MICALCLQ6ZW33 695 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
CLTC-215ENST00000621829 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
CLTC-215ENST00000621829 STK3Q13188 491 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 CAMK4Q16566 473 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
CLTC-215ENST00000621829 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 ME1P48163 572 aa13.73□□□□□ -0.21
CLTC-215ENST00000621829 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
CLTC-215ENST00000621829 NINLQ9Y2I6 1382 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
CLTC-215ENST00000621829 STK38Q15208 465 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 CBFA2T2O43439 604 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 SYCP1Q15431 976 aa13.72□□□□□ -0.21
CLTC-215ENST00000621829 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.211e-7■■■■■ 66.8
CLTC-215ENST00000621829 PDIA4P13667 645 aaKnown RBP13.72□□□□□ -0.21
CLTC-215ENST00000621829 AMPHP49418 695 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 JAKMIP3Q5VZ66 844 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 TDO2P48775 406 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 MCM2P49736 904 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 PDCP20941 246 aa13.71□□□□□ -0.21
CLTC-215ENST00000621829 ERC2O15083 957 aa13.71□□□□□ -0.22
CLTC-215ENST00000621829 NUP155O75694 1391 aa13.71□□□□□ -0.22
CLTC-215ENST00000621829 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.224e-8■■■■□ 21.5
CLTC-215ENST00000621829 MAP9Q49MG5 647 aa13.71□□□□□ -0.22
CLTC-215ENST00000621829 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.22
CLTC-215ENST00000621829 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 RAI14Q9P0K7 980 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
CLTC-215ENST00000621829 IGSF3O75054 1194 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 EIF4G1Q04637 1599 aaKnown RBP13.7□□□□□ -0.22
CLTC-215ENST00000621829 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
CLTC-215ENST00000621829 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
CLTC-215ENST00000621829 RIPK4P57078 832 aa13.69□□□□□ -0.22
CLTC-215ENST00000621829 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
CLTC-215ENST00000621829 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
CLTC-215ENST00000621829 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
CLTC-215ENST00000621829 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
CLTC-215ENST00000621829 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
CLTC-215ENST00000621829 GTF2E1P29083 439 aaPredicted RBP13.68□□□□□ -0.22
CLTC-215ENST00000621829 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 LUC7LQ9NQ29 371 aaKnown RBP13.68□□□□□ -0.22
CLTC-215ENST00000621829 FYB1O15117 783 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 KRT85P78386 507 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 C1orf115Q9H7X2 142 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 ATP2C2O75185 946 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 XBP1P17861 261 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
CLTC-215ENST00000621829 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
CLTC-215ENST00000621829 TTC31Q49AM3 519 aaPredicted RBP13.67□□□□□ -0.22
CLTC-215ENST00000621829 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
CLTC-215ENST00000621829 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
CLTC-215ENST00000621829 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
CLTC-215ENST00000621829 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
CLTC-215ENST00000621829 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
CLTC-215ENST00000621829 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
CLTC-215ENST00000621829 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
CLTC-215ENST00000621829 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
CLTC-215ENST00000621829 DACH1Q9UI36 760 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 CCDC91Q7Z6B0 441 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 USP47Q96K76 1375 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 KRT222Q8N1A0 295 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 MLECQ14165 292 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
CLTC-215ENST00000621829 SPATA24Q86W54 205 aa13.66□□□□□ -0.22
CLTC-215ENST00000621829 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
CLTC-215ENST00000621829 TXLNAP40222 546 aa13.65□□□□□ -0.22
CLTC-215ENST00000621829 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
CLTC-215ENST00000621829 C10orf67Q8IYJ2 551 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms