RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
SRRT-217ENST00000618411 SSH1Q8WYL5 1049 aa18.74■□□□□ 0.59
SRRT-217ENST00000618411 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.74■□□□□ 0.59
SRRT-217ENST00000618411 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
SRRT-217ENST00000618411 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
SRRT-217ENST00000618411 MTHFSP49914 203 aa18.72■□□□□ 0.59
SRRT-217ENST00000618411 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
SRRT-217ENST00000618411 NUCB2P80303 420 aa18.72■□□□□ 0.59
SRRT-217ENST00000618411 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
SRRT-217ENST00000618411 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
SRRT-217ENST00000618411 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
SRRT-217ENST00000618411 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
SRRT-217ENST00000618411 TMEM57Q8N5G2 664 aa18.71■□□□□ 0.59
SRRT-217ENST00000618411 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
SRRT-217ENST00000618411 XPCQ01831 940 aaPredicted RBP18.71■□□□□ 0.59
SRRT-217ENST00000618411 ADGRB2O60241 1585 aa18.71■□□□□ 0.59
SRRT-217ENST00000618411 CFAP74Q9C0B2 1584 aa18.71■□□□□ 0.59
SRRT-217ENST00000618411 RBSNQ9H1K0 784 aa18.71■□□□□ 0.59
SRRT-217ENST00000618411 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
SRRT-217ENST00000618411 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
SRRT-217ENST00000618411 CAVIN1Q6NZI2 390 aaKnown RBP18.7■□□□□ 0.58
SRRT-217ENST00000618411 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
SRRT-217ENST00000618411 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
SRRT-217ENST00000618411 NEURL4Q96JN8 1562 aa18.7■□□□□ 0.58
SRRT-217ENST00000618411 LMBRD1Q9NUN5 540 aa18.7■□□□□ 0.58
SRRT-217ENST00000618411 NOS1P29475 1434 aa18.69■□□□□ 0.58
SRRT-217ENST00000618411 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
SRRT-217ENST00000618411 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
SRRT-217ENST00000618411 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
SRRT-217ENST00000618411 SASS6Q6UVJ0 657 aa18.68■□□□□ 0.58
SRRT-217ENST00000618411 MYO3AQ8NEV4 1616 aa18.68■□□□□ 0.58
SRRT-217ENST00000618411 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SRRT-217ENST00000618411 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
SRRT-217ENST00000618411 FBLN2P98095 1184 aa18.67■□□□□ 0.58
SRRT-217ENST00000618411 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
SRRT-217ENST00000618411 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.587e-7■■■□□ 19.2
SRRT-217ENST00000618411 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
SRRT-217ENST00000618411 MYOM2P54296 1465 aa18.67■□□□□ 0.58
SRRT-217ENST00000618411 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
SRRT-217ENST00000618411 CCDC39Q9UFE4 941 aa18.67■□□□□ 0.58
SRRT-217ENST00000618411 MAP3K4Q9Y6R4 1608 aa18.66■□□□□ 0.58
SRRT-217ENST00000618411 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
SRRT-217ENST00000618411 IL16Q14005 1332 aa18.66■□□□□ 0.58
SRRT-217ENST00000618411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.585e-6■■■■□ 19.7
SRRT-217ENST00000618411 USP32Q8NFA0 1604 aa18.66■□□□□ 0.58
SRRT-217ENST00000618411 RABEP1Q15276 862 aa18.66■□□□□ 0.58
SRRT-217ENST00000618411 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
SRRT-217ENST00000618411 ANKRD45Q5TZF3 282 aa18.64■□□□□ 0.57
SRRT-217ENST00000618411 REREQ9P2R6 1566 aa18.64■□□□□ 0.57
SRRT-217ENST00000618411 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
SRRT-217ENST00000618411 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
SRRT-217ENST00000618411 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
SRRT-217ENST00000618411 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
SRRT-217ENST00000618411 CDC45O75419 566 aa18.63■□□□□ 0.57
SRRT-217ENST00000618411 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
SRRT-217ENST00000618411 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
SRRT-217ENST00000618411 CCDC94Q9BW85 323 aaPredicted RBP18.62■□□□□ 0.57
SRRT-217ENST00000618411 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
SRRT-217ENST00000618411 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
SRRT-217ENST00000618411 LRSAM1Q6UWE0 723 aa18.62■□□□□ 0.57
SRRT-217ENST00000618411 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
SRRT-217ENST00000618411 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
SRRT-217ENST00000618411 TET3O43151 1660 aa18.6■□□□□ 0.57
SRRT-217ENST00000618411 MED14O60244 1454 aa18.6■□□□□ 0.57
SRRT-217ENST00000618411 NSD2O96028 1365 aa18.6■□□□□ 0.57
SRRT-217ENST00000618411 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
SRRT-217ENST00000618411 PPIP5K1Q6PFW1 1433 aa18.59■□□□□ 0.57
SRRT-217ENST00000618411 CD109Q6YHK3 1445 aa18.59■□□□□ 0.57
SRRT-217ENST00000618411 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
SRRT-217ENST00000618411 GPT2Q8TD30 523 aa18.59■□□□□ 0.57
SRRT-217ENST00000618411 DMTNQ08495 405 aa18.59■□□□□ 0.57
SRRT-217ENST00000618411 BRPF1P55201 1214 aaPredicted RBP18.58■□□□□ 0.57
SRRT-217ENST00000618411 ZBTB7BO15156 539 aaPredicted RBP18.57■□□□□ 0.56
SRRT-217ENST00000618411 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
SRRT-217ENST00000618411 TRAPPC8Q9Y2L5 1435 aa18.57■□□□□ 0.56
SRRT-217ENST00000618411 MYRIPQ8NFW9 859 aa18.56■□□□□ 0.56
SRRT-217ENST00000618411 RBM27Q9P2N5 1060 aaKnown RBP18.56■□□□□ 0.56
SRRT-217ENST00000618411 NRXN1Q9ULB1 1477 aa18.56■□□□□ 0.56
SRRT-217ENST00000618411 TMEM63CQ9P1W3 806 aa18.56■□□□□ 0.56
SRRT-217ENST00000618411 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
SRRT-217ENST00000618411 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
SRRT-217ENST00000618411 PKP1Q13835 747 aa18.55■□□□□ 0.56
SRRT-217ENST00000618411 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
SRRT-217ENST00000618411 INO80Q9ULG1 1556 aaPredicted RBP18.54■□□□□ 0.56
SRRT-217ENST00000618411 ZSCAN20P17040 1043 aaPredicted RBP18.54■□□□□ 0.56
SRRT-217ENST00000618411 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
SRRT-217ENST00000618411 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
SRRT-217ENST00000618411 SYCE3A1L190 88 aa18.54■□□□□ 0.56
SRRT-217ENST00000618411 MBD3O95983 291 aa18.54■□□□□ 0.56
SRRT-217ENST00000618411 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
SRRT-217ENST00000618411 ARID3AQ99856 593 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 PLCH2O75038 1416 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 IFT172Q9UG01 1749 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
SRRT-217ENST00000618411 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms