RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 ZRANB1Q9UGI0 708 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 GLI2P10070 1586 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 PREX1Q8TCU6 1659 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 NCLP19338 710 aaKnown RBP7.1□□□□□ -1.27
CPNE4-214ENST00000617767 NEXMIFQ5QGS0 1516 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 KIF13AQ9H1H9 1805 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 ARID3AQ99856 593 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 BCCIPQ9P287 314 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPNE4-214ENST00000617767 RPGRIP1LQ68CZ1 1315 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 ZMYM3Q14202 1370 aa7.1□□□□□ -1.27
CPNE4-214ENST00000617767 CGNL1Q0VF96 1302 aa7.09□□□□□ -1.27
CPNE4-214ENST00000617767 MAPK8IP2Q13387 824 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-214ENST00000617767 CNKSR2Q8WXI2 1034 aa7.09□□□□□ -1.27
CPNE4-214ENST00000617767 BCAR3O75815 825 aa7.09□□□□□ -1.27
CPNE4-214ENST00000617767 CRBNQ96SW2 442 aa7.09□□□□□ -1.27
CPNE4-214ENST00000617767 RNF216Q9NWF9 866 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-214ENST00000617767 ADGRB1O14514 1584 aa7.09□□□□□ -1.27
CPNE4-214ENST00000617767 GOLGA2Q08379 1002 aa7.09□□□□□ -1.28
CPNE4-214ENST00000617767 A0A1W2PP64 1363 aa7.08□□□□□ -1.28
CPNE4-214ENST00000617767 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
CPNE4-214ENST00000617767 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
CPNE4-214ENST00000617767 WWC1Q8IX03 1113 aa7.08□□□□□ -1.28
CPNE4-214ENST00000617767 SMAP1Q8IYB5 467 aaPredicted RBP7.08□□□□□ -1.28
CPNE4-214ENST00000617767 YTHDC2Q9H6S0 1430 aaKnown RBP7.08□□□□□ -1.28
CPNE4-214ENST00000617767 E9PSI1 815 aa7.08□□□□□ -1.28
CPNE4-214ENST00000617767 RIMS2Q9UQ26 1411 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 TCP11L2Q8N4U5 519 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 NRXN1Q9ULB1 1477 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 METP08581 1390 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 KIAA1210Q9ULL0 1709 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 TULP4Q9NRJ4 1543 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 FRAT2O75474 233 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-214ENST00000617767 HMOX1P09601 288 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 LTKP29376 864 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 TMEM131LA2VDJ0 1609 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 TPM2P07951 284 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 RRS1Q15050 365 aaKnown RBP7.07□□□□□ -1.28
CPNE4-214ENST00000617767 CLUAP1Q96AJ1 413 aa7.07□□□□□ -1.28
CPNE4-214ENST00000617767 ARHGEF28Q8N1W1 1705 aaKnown RBP7.06□□□□□ -1.28
CPNE4-214ENST00000617767 FYB1O15117 783 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 DUSP27Q5VZP5 1158 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 NME9Q86XW9 330 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-214ENST00000617767 RGS22Q8NE09 1264 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 TSR2Q969E8 191 aaKnown RBP7.06□□□□□ -1.28
CPNE4-214ENST00000617767 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
CPNE4-214ENST00000617767 CFAP53Q96M91 514 aa7.05□□□□□ -1.28
CPNE4-214ENST00000617767 BLMP54132 1417 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-214ENST00000617767 ZC3H13Q5T200 1668 aaKnown RBP7.05□□□□□ -1.28
CPNE4-214ENST00000617767 TNNQ9UQP3 1299 aa7.05□□□□□ -1.28
CPNE4-214ENST00000617767 EMILIN1Q9Y6C2 1016 aa7.05□□□□□ -1.28
CPNE4-214ENST00000617767 ALKQ9UM73 1620 aa7.05□□□□□ -1.28
CPNE4-214ENST00000617767 ARHGAP31Q2M1Z3 1444 aa7.05□□□□□ -1.28
CPNE4-214ENST00000617767 A2ML1A8K2U0 1454 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 TCERG1O14776 1098 aaKnown RBP7.04□□□□□ -1.28
CPNE4-214ENST00000617767 THUMPD2Q9BTF0 503 aaKnown RBP7.04□□□□□ -1.28
CPNE4-214ENST00000617767 ZBTB7CA1YPR0 619 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 IRX3P78415 501 aaPredicted RBP7.04□□□□□ -1.28
CPNE4-214ENST00000617767 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 CERS3Q8IU89 383 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 PANK1Q8TE04 598 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 TNRQ92752 1358 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 ZBTB22O15209 634 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 SLFN5Q08AF3 891 aa7.04□□□□□ -1.28
CPNE4-214ENST00000617767 ANKRD36BQ8N2N9 1353 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 ELL2O00472 640 aaPredicted RBP7.03□□□□□ -1.28
CPNE4-214ENST00000617767 CDK11BP21127 795 aaKnown RBP7.03□□□□□ -1.28
CPNE4-214ENST00000617767 NUDT16Q96DE0 195 aaKnown RBP7.03□□□□□ -1.28
CPNE4-214ENST00000617767 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 SETBP1Q9Y6X0 1596 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 PTPRMP28827 1452 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 ZMYM4Q5VZL5 1548 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
CPNE4-214ENST00000617767 DMTNQ08495 405 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 COG6Q9Y2V7 657 aa7.03□□□□□ -1.28
CPNE4-214ENST00000617767 SETD1BQ9UPS6 1966 aaKnown RBP7.02□□□□□ -1.28
CPNE4-214ENST00000617767 DNTTIP2Q5QJE6 756 aaKnown RBP7.02□□□□□ -1.29
CPNE4-214ENST00000617767 RUNDC1Q96C34 613 aa7.02□□□□□ -1.29
CPNE4-214ENST00000617767 MAPK8IP3Q9UPT6 1336 aa7.02□□□□□ -1.29
CPNE4-214ENST00000617767 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
CPNE4-214ENST00000617767 WASLO00401 505 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-214ENST00000617767 L1TD1Q5T7N2 865 aaKnown RBP7.02□□□□□ -1.29
CPNE4-214ENST00000617767 RNF123Q5XPI4 1314 aa7.01□□□□□ -1.29
CPNE4-214ENST00000617767 DIAPH1O60610 1272 aaKnown RBP7.01□□□□□ -1.29
CPNE4-214ENST00000617767 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
CPNE4-214ENST00000617767 TMED8Q6PL24 325 aaPredicted RBP7.01□□□□□ -1.29
CPNE4-214ENST00000617767 KIAA1211Q6ZU35 1233 aa7.01□□□□□ -1.29
CPNE4-214ENST00000617767 EID1Q9Y6B2 187 aa7.01□□□□□ -1.29
CPNE4-214ENST00000617767 ARHGEF40Q8TER5 1519 aa7.01□□□□□ -1.29
CPNE4-214ENST00000617767 MYO3AQ8NEV4 1616 aa7.01□□□□□ -1.29
CPNE4-214ENST00000617767 PDE4AP27815 886 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 RIPK4P57078 832 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 AMOTL2Q9Y2J4 779 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 PPIP5K1Q6PFW1 1433 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 PRKAR2BP31323 418 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 DCTN1Q14203 1278 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms