RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SSR1P43307 286 aaKnown RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 LRRCC1Q9C099 1032 aa7.14□□□□□ -1.27
RFX3-212ENST00000617270 LUC7LQ9NQ29 371 aaKnown RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 TBC1D2BQ9UPU7 963 aa7.14□□□□□ -1.27
RFX3-212ENST00000617270 GOLGA6L10A0A0M3HER8 536 aa7.14□□□□□ -1.27
RFX3-212ENST00000617270 LETM1O95202 739 aaPredicted RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 ST20-MTHFSA0A0A6YYL1 179 aa7.14□□□□□ -1.27
RFX3-212ENST00000617270 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 UBTFL1P0CB47 393 aaPredicted RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 DIAPH1O60610 1272 aaKnown RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 ZNF396Q96N95 335 aaPredicted RBP7.14□□□□□ -1.27
RFX3-212ENST00000617270 CNTROBQ8N137 903 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 PHF23Q9BUL5 403 aaPredicted RBP7.13□□□□□ -1.27
RFX3-212ENST00000617270 KIF7Q2M1P5 1343 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 EFCAB2Q5VUJ9 269 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 PPP1R1BQ9UD71 204 aaPredicted RBP7.13□□□□□ -1.27
RFX3-212ENST00000617270 EVC2Q86UK5 1308 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 SLC3A2P08195 630 aaKnown RBP7.13□□□□□ -1.27
RFX3-212ENST00000617270 USP8P40818 1118 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 MATR3P43243 847 aaKnown RBP eCLIP7.13□□□□□ -1.278e-10■■■□□ 15.7
RFX3-212ENST00000617270 STK3Q13188 491 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 STIM1Q13586 685 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 PANK1Q8TE04 598 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 MBD3O95983 291 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 TICAM2Q86XR7 235 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 TRAK2O60296 914 aa7.13□□□□□ -1.27
RFX3-212ENST00000617270 SSBP05455 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
RFX3-212ENST00000617270 NEK4P51957 841 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 IQCEQ6IPM2 695 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 FMN1Q68DA7 1419 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 ME1P48163 572 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 FANCIQ9NVI1 1328 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 CEP63Q96MT8 703 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
RFX3-212ENST00000617270 PODXL2Q9NZ53 605 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 ZBED9Q6R2W3 1325 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 HMOX1P09601 288 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 HNRNPMP52272 730 aaKnown RBP eCLIP7.12□□□□□ -1.27
RFX3-212ENST00000617270 TXLNBQ8N3L3 684 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 TNMDQ9H2S6 317 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 UQCRHLA0A096LP55 91 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 UQCRHP07919 91 aa7.12□□□□□ -1.27
RFX3-212ENST00000617270 RBM25P49756 843 aaKnown RBP7.11□□□□□ -1.27
RFX3-212ENST00000617270 PSME1Q06323 249 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 AEBP1Q8IUX7 1158 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 SLC26A8Q96RN1 970 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 CCDC192P0DO97 292 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 CARMIL1Q5VZK9 1371 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 PDCP20941 246 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 CCDC91Q7Z6B0 441 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 DESP17661 470 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 CCDC144AA2RUR9 1427 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 RAPGEF4Q8WZA2 1011 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 CFAP45Q9UL16 551 aa7.11□□□□□ -1.27
RFX3-212ENST00000617270 NUP133Q8WUM0 1156 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 PUS7Q96PZ0 661 aaKnown RBP7.1□□□□□ -1.27
RFX3-212ENST00000617270 CUX2O14529 1486 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 TAF4BQ92750 862 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 GNAI1P63096 354 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 MAP2K1Q02750 393 aaPredicted RBP7.1□□□□□ -1.27
RFX3-212ENST00000617270 DACH1Q9UI36 760 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 JAKMIP3Q5VZ66 844 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 TMCO3Q6UWJ1 677 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 TRIM22Q8IYM9 498 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 ANAPC15P60006 121 aa7.1□□□□□ -1.27
RFX3-212ENST00000617270 SURF6O75683 361 aaKnown RBP7.09□□□□□ -1.27
RFX3-212ENST00000617270 UBE4AQ14139 1066 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 KIAA1328Q86T90 577 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 BCCIPQ9P287 314 aaKnown RBP eCLIP7.09□□□□□ -1.27
RFX3-212ENST00000617270 STAMBPO95630 424 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 ARHGAP29Q52LW3 1261 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 CARMIL2Q6F5E8 1435 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 MPHOSPH10O00566 681 aaKnown RBP7.09□□□□□ -1.27
RFX3-212ENST00000617270 DCAF8L1A6NGE4 600 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 CBFA2T2O43439 604 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 PSMD1Q99460 953 aa7.09□□□□□ -1.27
RFX3-212ENST00000617270 SHTN1A0MZ66 631 aa7.09□□□□□ -1.28
RFX3-212ENST00000617270 CCDC69A6NI79 296 aa7.09□□□□□ -1.28
RFX3-212ENST00000617270 RBM5P52756 815 aaKnown RBP eCLIP7.09□□□□□ -1.28
RFX3-212ENST00000617270 MACROD2A1Z1Q3 448 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 EIF5P55010 431 aaKnown RBP7.08□□□□□ -1.28
RFX3-212ENST00000617270 SOGA3Q5TF21 947 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 C1orf115Q9H7X2 142 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 IL27Q8NEV9 243 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 PIBF1Q8WXW3 757 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 PRKRIP1Q9H875 184 aaPredicted RBP7.08□□□□□ -1.28
RFX3-212ENST00000617270 USP47Q96K76 1375 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 DNA2P51530 1060 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 CHMP4BP1P59074 171 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 SERPINA10Q9UK55 444 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 WASHC2AQ641Q2 1341 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 EPB41L2O43491 1005 aaKnown RBP7.08□□□□□ -1.28
RFX3-212ENST00000617270 FILIP1Q7Z7B0 1213 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 CNNM1Q9NRU3 951 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms