RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
CFHR3-206ENST00000617219 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
CFHR3-206ENST00000617219 ATAD2BQ9ULI0 1458 aa8.18□□□□□ -1.1
CFHR3-206ENST00000617219 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
CFHR3-206ENST00000617219 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.18□□□□□ -1.1
CFHR3-206ENST00000617219 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
CFHR3-206ENST00000617219 SLC19A1P41440 591 aa8.17□□□□□ -1.1
CFHR3-206ENST00000617219 NCAPD3P42695 1498 aa8.17□□□□□ -1.1
CFHR3-206ENST00000617219 LILRB3O75022 631 aa8.16□□□□□ -1.1
CFHR3-206ENST00000617219 HRCP23327 699 aa8.16□□□□□ -1.1
CFHR3-206ENST00000617219 BRICD5Q6PL45 260 aa8.16□□□□□ -1.1
CFHR3-206ENST00000617219 RETREG3Q86VR2 466 aa8.16□□□□□ -1.1
CFHR3-206ENST00000617219 SPSB2Q99619 263 aa8.16□□□□□ -1.1
CFHR3-206ENST00000617219 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
CFHR3-206ENST00000617219 SPRYD7Q5W111 196 aa8.15□□□□□ -1.1
CFHR3-206ENST00000617219 RNF19BQ6ZMZ0 732 aa8.15□□□□□ -1.1
CFHR3-206ENST00000617219 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
CFHR3-206ENST00000617219 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
CFHR3-206ENST00000617219 ADAM23O75077 832 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 ADH1BP00325 375 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 QPCTQ16769 361 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 SYMPKQ92797 1274 aaKnown RBP8.14□□□□□ -1.11
CFHR3-206ENST00000617219 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CFHR3-206ENST00000617219 GDF9O60383 454 aa8.13□□□□□ -1.11
CFHR3-206ENST00000617219 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
CFHR3-206ENST00000617219 TLL1O43897 1013 aa8.13□□□□□ -1.11
CFHR3-206ENST00000617219 HELBQ8NG08 1087 aaPredicted RBP8.13□□□□□ -1.11
CFHR3-206ENST00000617219 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
CFHR3-206ENST00000617219 HMGXB3Q12766 1538 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 AXIN1O15169 862 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 RFC5P40937 340 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 TMEM259Q4ZIN3 620 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 Q8N3U1 123 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 TSC1Q92574 1164 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
CFHR3-206ENST00000617219 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
CFHR3-206ENST00000617219 BAZ1BQ9UIG0 1483 aaKnown RBP8.11□□□□□ -1.11
CFHR3-206ENST00000617219 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
CFHR3-206ENST00000617219 AVPP01185 164 aa8.1□□□□□ -1.11
CFHR3-206ENST00000617219 IRF7Q92985 503 aa8.1□□□□□ -1.11
CFHR3-206ENST00000617219 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
CFHR3-206ENST00000617219 DESI1Q6ICB0 168 aa8.09□□□□□ -1.11
CFHR3-206ENST00000617219 PEG3Q9GZU2 1588 aa8.09□□□□□ -1.11
CFHR3-206ENST00000617219 CFAP99D6REC4 459 aa8.08□□□□□ -1.12
CFHR3-206ENST00000617219 AP1G2O75843 785 aa8.08□□□□□ -1.12
CFHR3-206ENST00000617219 JUNDP17535 347 aa8.08□□□□□ -1.12
CFHR3-206ENST00000617219 FAM160A2Q8N612 972 aaPredicted RBP8.08□□□□□ -1.12
CFHR3-206ENST00000617219 NKX2-3Q8TAU0 364 aa8.08□□□□□ -1.12
CFHR3-206ENST00000617219 KRTAP4-2Q9BYR5 136 aa8.08□□□□□ -1.12
CFHR3-206ENST00000617219 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
CFHR3-206ENST00000617219 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
CFHR3-206ENST00000617219 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
CFHR3-206ENST00000617219 S1PR4O95977 384 aa8.06□□□□□ -1.12
CFHR3-206ENST00000617219 BANK1Q8NDB2 785 aa8.06□□□□□ -1.12
CFHR3-206ENST00000617219 NESP48681 1621 aa8.06□□□□□ -1.12
CFHR3-206ENST00000617219 DXOO77932 396 aaKnown RBP8.06□□□□□ -1.12
CFHR3-206ENST00000617219 MMP16P51512 607 aa8.06□□□□□ -1.12
CFHR3-206ENST00000617219 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
CFHR3-206ENST00000617219 FBXO31Q5XUX0 539 aaPredicted RBP8.05□□□□□ -1.12
CFHR3-206ENST00000617219 PRDM9Q9NQV7 894 aa8.05□□□□□ -1.12
CFHR3-206ENST00000617219 ERCC6Q03468 1493 aa8.05□□□□□ -1.12
CFHR3-206ENST00000617219 WIZO95785 1651 aa8.04□□□□□ -1.12
CFHR3-206ENST00000617219 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
CFHR3-206ENST00000617219 APBB1O00213 710 aa8.04□□□□□ -1.12
CFHR3-206ENST00000617219 FLIIQ13045 1269 aa8.04□□□□□ -1.12
CFHR3-206ENST00000617219 PTPRNQ16849 979 aa8.04□□□□□ -1.12
CFHR3-206ENST00000617219 ZNF697Q5TEC3 545 aa8.04□□□□□ -1.12
CFHR3-206ENST00000617219 DNMT3AQ9Y6K1 912 aaPredicted RBP8.04□□□□□ -1.12
CFHR3-206ENST00000617219 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
CFHR3-206ENST00000617219 CTDSPL2Q05D32 466 aa8.03□□□□□ -1.12
CFHR3-206ENST00000617219 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
CFHR3-206ENST00000617219 NUDT12Q9BQG2 462 aa8.03□□□□□ -1.12
CFHR3-206ENST00000617219 FOXK2Q01167 660 aa8.02□□□□□ -1.13
CFHR3-206ENST00000617219 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
CFHR3-206ENST00000617219 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
CFHR3-206ENST00000617219 KRTAP4-9Q9BYQ8 210 aa8.02□□□□□ -1.13
CFHR3-206ENST00000617219 CCNYL3P0C7X3 344 aa8.01□□□□□ -1.13
CFHR3-206ENST00000617219 CTHP32929 405 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 ANKLE1Q8NAG6 615 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 PRM3Q9NNZ6 103 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 FCF1Q9Y324 198 aaKnown RBP8□□□□□ -1.13
CFHR3-206ENST00000617219 RSF1Q96T23 1441 aaPredicted RBP8□□□□□ -1.13
CFHR3-206ENST00000617219 RNF223E7ERA6 249 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 PNMA1Q8ND90 353 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 SENP2Q9HC62 589 aa8□□□□□ -1.13
CFHR3-206ENST00000617219 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
CFHR3-206ENST00000617219 SOCS7O14512 581 aa7.99□□□□□ -1.13
CFHR3-206ENST00000617219 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
CFHR3-206ENST00000617219 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
CFHR3-206ENST00000617219 NPAS3Q8IXF0 933 aa7.99□□□□□ -1.13
CFHR3-206ENST00000617219 EVA1BQ9NVM1 165 aa7.99□□□□□ -1.13
CFHR3-206ENST00000617219 PPEF1O14829 653 aaPredicted RBP7.98□□□□□ -1.13
CFHR3-206ENST00000617219 KCNH2Q12809 1159 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms