RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 ATAD2Q6PL18 1390 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 SASS6Q6UVJ0 657 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.51■■□□□ 1.19
CDH23-212ENST00000616684 ZNF592Q92610 1267 aa22.5■■□□□ 1.19
CDH23-212ENST00000616684 ABCC5O15440 1437 aa22.5■■□□□ 1.19
CDH23-212ENST00000616684 CCAR2Q8N163 923 aaKnown RBP22.49■■□□□ 1.19
CDH23-212ENST00000616684 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
CDH23-212ENST00000616684 PSMA5P28066 241 aa22.49■■□□□ 1.19
CDH23-212ENST00000616684 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
CDH23-212ENST00000616684 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
CDH23-212ENST00000616684 MCM2P49736 904 aa22.48■■□□□ 1.19
CDH23-212ENST00000616684 ERICH2A1L162 156 aa22.48■■□□□ 1.19
CDH23-212ENST00000616684 FCHSD2O94868 740 aa22.48■■□□□ 1.19
CDH23-212ENST00000616684 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
CDH23-212ENST00000616684 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
CDH23-212ENST00000616684 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
CDH23-212ENST00000616684 CCT4P50991 539 aaKnown RBP22.47■■□□□ 1.19
CDH23-212ENST00000616684 FAM43AQ8N2R8 423 aa22.47■■□□□ 1.19
CDH23-212ENST00000616684 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
CDH23-212ENST00000616684 NASPP49321 788 aaPredicted RBP22.47■■□□□ 1.19
CDH23-212ENST00000616684 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
CDH23-212ENST00000616684 RNF214Q8ND24 703 aa22.46■■□□□ 1.19
CDH23-212ENST00000616684 MSH5O43196 834 aa22.46■■□□□ 1.19
CDH23-212ENST00000616684 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
CDH23-212ENST00000616684 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
CDH23-212ENST00000616684 PROSER2Q86WR7 435 aaPredicted RBP22.46■■□□□ 1.19
CDH23-212ENST00000616684 SAFBQ15424 915 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDH23-212ENST00000616684 CAVIN1Q6NZI2 390 aaKnown RBP22.45■■□□□ 1.18
CDH23-212ENST00000616684 HOOK1Q9UJC3 728 aaKnown RBP22.45■■□□□ 1.18
CDH23-212ENST00000616684 CAMSAP2Q08AD1 1489 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 PLB1Q6P1J6 1458 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 CHD1LQ86WJ1 897 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 RAD21O60216 631 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 DHX16O60231 1041 aaKnown RBP22.44■■□□□ 1.18
CDH23-212ENST00000616684 MBD3O95983 291 aa22.44■■□□□ 1.18
CDH23-212ENST00000616684 TPM2P07951 284 aa22.43■■□□□ 1.18
CDH23-212ENST00000616684 SRCIN1Q9C0H9 1055 aa22.43■■□□□ 1.18
CDH23-212ENST00000616684 PDE4CQ08493 712 aa22.43■■□□□ 1.18
CDH23-212ENST00000616684 ZNF530Q6P9A1 599 aaPredicted RBP22.43■■□□□ 1.18
CDH23-212ENST00000616684 PTPN23Q9H3S7 1636 aa22.43■■□□□ 1.18
CDH23-212ENST00000616684 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 CEP89Q96ST8 783 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 DNAJC2Q99543 621 aaKnown RBP22.42■■□□□ 1.18
CDH23-212ENST00000616684 LRRCC1Q9C099 1032 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 CCDC61Q9Y6R9 512 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 ANKRD20A12PQ8NF67 263 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
CDH23-212ENST00000616684 PRPF40AO75400 957 aaKnown RBP22.42■■□□□ 1.18
CDH23-212ENST00000616684 NFE2L2Q16236 605 aa22.41■■□□□ 1.18
CDH23-212ENST00000616684 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.41■■□□□ 1.18
CDH23-212ENST00000616684 HOMER1Q86YM7 354 aa22.41■■□□□ 1.18
CDH23-212ENST00000616684 SDF4Q9BRK5 362 aa22.41■■□□□ 1.18
CDH23-212ENST00000616684 HIP1O00291 1037 aa22.41■■□□□ 1.18
CDH23-212ENST00000616684 IPO7O95373 1038 aaKnown RBP22.41■■□□□ 1.18
CDH23-212ENST00000616684 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
CDH23-212ENST00000616684 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
CDH23-212ENST00000616684 PDCP20941 246 aa22.4■■□□□ 1.18
CDH23-212ENST00000616684 A0A0U1RQG5 324 aaPredicted RBP22.4■■□□□ 1.18
CDH23-212ENST00000616684 TATP17735 454 aaPredicted RBP22.4■■□□□ 1.18
CDH23-212ENST00000616684 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
CDH23-212ENST00000616684 FAM13BQ9NYF5 915 aa22.39■■□□□ 1.17
CDH23-212ENST00000616684 NUDT16Q96DE0 195 aaKnown RBP22.38■■□□□ 1.17
CDH23-212ENST00000616684 PCMTD1Q96MG8 357 aaPredicted RBP22.38■■□□□ 1.17
CDH23-212ENST00000616684 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
CDH23-212ENST00000616684 TRIM34Q9BYJ4 488 aa22.37■■□□□ 1.17
CDH23-212ENST00000616684 K7ELQ4 463 aaPredicted RBP22.36■■□□□ 1.17
CDH23-212ENST00000616684 TNNT3P45378 269 aaPredicted RBP22.36■■□□□ 1.17
CDH23-212ENST00000616684 C20orf194Q5TEA3 1177 aa22.36■■□□□ 1.17
CDH23-212ENST00000616684 FIBPO43427 364 aa22.36■■□□□ 1.17
CDH23-212ENST00000616684 IFT57Q9NWB7 429 aa22.36■■□□□ 1.17
CDH23-212ENST00000616684 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
CDH23-212ENST00000616684 RPAP2Q8IXW5 612 aaPredicted RBP22.35■■□□□ 1.17
CDH23-212ENST00000616684 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CDH23-212ENST00000616684 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
CDH23-212ENST00000616684 CUL7Q14999 1698 aa22.35■■□□□ 1.17
CDH23-212ENST00000616684 RBM33Q96EV2 1170 aaKnown RBP22.34■■□□□ 1.17
CDH23-212ENST00000616684 FAM177BA6PVY3 158 aa22.34■■□□□ 1.17
CDH23-212ENST00000616684 CWC22Q9HCG8 908 aaKnown RBP22.34■■□□□ 1.17
CDH23-212ENST00000616684 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
CDH23-212ENST00000616684 FYB1O15117 783 aa22.34■■□□□ 1.17
CDH23-212ENST00000616684 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
CDH23-212ENST00000616684 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
CDH23-212ENST00000616684 SIL1Q9H173 461 aa22.34■■□□□ 1.17
CDH23-212ENST00000616684 WAPLQ7Z5K2 1190 aa22.34■■□□□ 1.17
CDH23-212ENST00000616684 SRGAP3O43295 1099 aa22.33■■□□□ 1.17
CDH23-212ENST00000616684 RPRD2Q5VT52 1461 aaKnown RBP22.33■■□□□ 1.17
CDH23-212ENST00000616684 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.17
CDH23-212ENST00000616684 CCDC39Q9UFE4 941 aa22.33■■□□□ 1.16
CDH23-212ENST00000616684 CYP46A1Q9Y6A2 500 aa22.32■■□□□ 1.16
CDH23-212ENST00000616684 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
CDH23-212ENST00000616684 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
CDH23-212ENST00000616684 NAT10Q9H0A0 1025 aaKnown RBP22.31■■□□□ 1.16
CDH23-212ENST00000616684 IL1RAPL2Q9NP60 686 aa22.31■■□□□ 1.16
CDH23-212ENST00000616684 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
CDH23-212ENST00000616684 KINO60870 393 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms