RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TOPAZ1Q8N9V7 1692 aa30.23■■■□□ 2.43
TRAPPC3-208ENST00000616074 NUDT16Q96DE0 195 aaKnown RBP30.23■■■□□ 2.43
TRAPPC3-208ENST00000616074 ONECUT3O60422 494 aaPredicted RBP30.22■■■□□ 2.43
TRAPPC3-208ENST00000616074 PAK3O75914 559 aaPredicted RBP30.22■■■□□ 2.43
TRAPPC3-208ENST00000616074 BLMP54132 1417 aaPredicted RBP30.22■■■□□ 2.43
TRAPPC3-208ENST00000616074 BTG4Q9NY30 223 aa30.21■■■□□ 2.43
TRAPPC3-208ENST00000616074 CDK19Q9BWU1 502 aa30.19■■■□□ 2.42
TRAPPC3-208ENST00000616074 PHRF1Q9P1Y6 1649 aaKnown RBP30.18■■■□□ 2.42
TRAPPC3-208ENST00000616074 ZRANB1Q9UGI0 708 aa30.17■■■□□ 2.42
TRAPPC3-208ENST00000616074 NBPF1Q3BBV0 1214 aa30.16■■■□□ 2.42
TRAPPC3-208ENST00000616074 KRT27Q7Z3Y8 459 aa30.15■■■□□ 2.42
TRAPPC3-208ENST00000616074 POLR3AO14802 1390 aaPredicted RBP30.14■■■□□ 2.41
TRAPPC3-208ENST00000616074 FAM98CQ17RN3 349 aaKnown RBP30.13■■■□□ 2.41
TRAPPC3-208ENST00000616074 A0A0G2JS52 829 aa30.12■■■□□ 2.41
TRAPPC3-208ENST00000616074 MYT1Q01538 1121 aa30.12■■■□□ 2.41
TRAPPC3-208ENST00000616074 DEFB132Q7Z7B7 95 aa30.11■■■□□ 2.41
TRAPPC3-208ENST00000616074 PRDM11Q9NQV5 511 aa30.11■■■□□ 2.41
TRAPPC3-208ENST00000616074 ACEP12821 1306 aa30.11■■■□□ 2.41
TRAPPC3-208ENST00000616074 CCDC61Q9Y6R9 512 aa30.1■■■□□ 2.41
TRAPPC3-208ENST00000616074 KIAA0232Q92628 1395 aa30.09■■■□□ 2.41
TRAPPC3-208ENST00000616074 SPATA31A5Q5VU36 1347 aa30.08■■■□□ 2.41
TRAPPC3-208ENST00000616074 SPATA31A7Q8IWB4 1347 aa30.08■■■□□ 2.41
TRAPPC3-208ENST00000616074 SF3B2Q13435 895 aaKnown RBP30.08■■■□□ 2.41
TRAPPC3-208ENST00000616074 PLEKHG3A1L390 1219 aa30.07■■■□□ 2.4
TRAPPC3-208ENST00000616074 NBPF8Q3BBV2 869 aa30.07■■■□□ 2.4
TRAPPC3-208ENST00000616074 NUTM2GQ5VZR2 741 aa30.07■■■□□ 2.4
TRAPPC3-208ENST00000616074 QRICH2Q9H0J4 1663 aa30.07■■■□□ 2.4
TRAPPC3-208ENST00000616074 THSD7AQ9UPZ6 1657 aa30.07■■■□□ 2.4
TRAPPC3-208ENST00000616074 CENPJQ9HC77 1338 aaPredicted RBP30.05■■■□□ 2.4
TRAPPC3-208ENST00000616074 NRKQ7Z2Y5 1582 aa30.04■■■□□ 2.4
TRAPPC3-208ENST00000616074 CHRNA2Q15822 529 aa30.04■■■□□ 2.4
TRAPPC3-208ENST00000616074 ZC3H6P61129 1189 aaKnown RBP30.02■■■□□ 2.4
TRAPPC3-208ENST00000616074 PPIP5K1Q6PFW1 1433 aa30.02■■■□□ 2.4
TRAPPC3-208ENST00000616074 SRPK2P78362 688 aaKnown RBP30.01■■■□□ 2.39
TRAPPC3-208ENST00000616074 RGPD1P0DJD0 1748 aa29.99■■■□□ 2.39
TRAPPC3-208ENST00000616074 L3MBTL2Q969R5 705 aa29.99■■■□□ 2.39
TRAPPC3-208ENST00000616074 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
TRAPPC3-208ENST00000616074 SPATA31A1Q5TZJ5 1347 aa29.98■■■□□ 2.39
TRAPPC3-208ENST00000616074 TRPM1Q7Z4N2 1603 aa29.98■■■□□ 2.39
TRAPPC3-208ENST00000616074 ABTB2Q8N961 1025 aa29.98■■■□□ 2.39
TRAPPC3-208ENST00000616074 STRN4Q9NRL3 753 aa29.98■■■□□ 2.39
TRAPPC3-208ENST00000616074 FAM182BQ5T319 152 aa29.97■■■□□ 2.39
TRAPPC3-208ENST00000616074 USP19O94966 1318 aa29.96■■■□□ 2.39
TRAPPC3-208ENST00000616074 LMO7Q8WWI1 1683 aa29.95■■■□□ 2.39
TRAPPC3-208ENST00000616074 SIN3AQ96ST3 1273 aa29.95■■■□□ 2.39
TRAPPC3-208ENST00000616074 BAG6P46379 1132 aa29.94■■■□□ 2.38
TRAPPC3-208ENST00000616074 CAMTA1Q9Y6Y1 1673 aa29.93■■■□□ 2.38
TRAPPC3-208ENST00000616074 SSH2Q76I76 1423 aa29.93■■■□□ 2.38
TRAPPC3-208ENST00000616074 TNS1Q9HBL0 1735 aaKnown RBP29.93■■■□□ 2.38
TRAPPC3-208ENST00000616074 CPDO75976 1380 aa29.91■■■□□ 2.38
TRAPPC3-208ENST00000616074 NLRP13Q86W25 1043 aa29.89■■■□□ 2.38
TRAPPC3-208ENST00000616074 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
TRAPPC3-208ENST00000616074 USP6P35125 1406 aa29.88■■■□□ 2.37
TRAPPC3-208ENST00000616074 EVA1CP58658 441 aa29.88■■■□□ 2.37
TRAPPC3-208ENST00000616074 CABP1Q9NZU7 370 aa29.88■■■□□ 2.37
TRAPPC3-208ENST00000616074 BRD4O60885 1362 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC3-208ENST00000616074 GCP02774 474 aa29.86■■■□□ 2.37
TRAPPC3-208ENST00000616074 EN1Q05925 392 aaPredicted RBP29.86■■■□□ 2.37
TRAPPC3-208ENST00000616074 NEUROD1Q13562 356 aa29.86■■■□□ 2.37
TRAPPC3-208ENST00000616074 LARP1Q6PKG0 1096 aaKnown RBP29.85■■■□□ 2.37
TRAPPC3-208ENST00000616074 BARGINQ6ZT62 677 aa29.84■■■□□ 2.37
TRAPPC3-208ENST00000616074 ROCK2O75116 1388 aaKnown RBP29.84■■■□□ 2.37
TRAPPC3-208ENST00000616074 DISP2A7MBM2 1401 aa29.84■■■□□ 2.37
TRAPPC3-208ENST00000616074 PIK3C2AO00443 1686 aa29.83■■■□□ 2.37
TRAPPC3-208ENST00000616074 EVC2Q86UK5 1308 aa29.83■■■□□ 2.37
TRAPPC3-208ENST00000616074 SLIT3O75094 1523 aa29.82■■■□□ 2.36
TRAPPC3-208ENST00000616074 LRP5O75197 1615 aa29.82■■■□□ 2.36
TRAPPC3-208ENST00000616074 COL5A2P05997 1499 aaPredicted RBP29.81■■■□□ 2.36
TRAPPC3-208ENST00000616074 PSDA5PKW4 1024 aaPredicted RBP29.81■■■□□ 2.36
TRAPPC3-208ENST00000616074 FAM196AQ6ZSG2 479 aa29.8■■■□□ 2.36
TRAPPC3-208ENST00000616074 AKAP12Q02952 1782 aa29.8■■■□□ 2.36
TRAPPC3-208ENST00000616074 NLRP6P59044 892 aa29.79■■■□□ 2.36
TRAPPC3-208ENST00000616074 TCP11L2Q8N4U5 519 aa29.79■■■□□ 2.36
TRAPPC3-208ENST00000616074 TRIM37O94972 964 aa29.78■■■□□ 2.36
TRAPPC3-208ENST00000616074 PARP4Q9UKK3 1724 aaKnown RBP29.77■■■□□ 2.36
TRAPPC3-208ENST00000616074 ZBTB7CA1YPR0 619 aa29.76■■■□□ 2.35
TRAPPC3-208ENST00000616074 PDE3BQ13370 1112 aa29.76■■■□□ 2.35
TRAPPC3-208ENST00000616074 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
TRAPPC3-208ENST00000616074 THRAP3Q9Y2W1 955 aaKnown RBP29.75■■■□□ 2.35
TRAPPC3-208ENST00000616074 COL18A1P39060 1754 aa29.75■■■□□ 2.35
TRAPPC3-208ENST00000616074 CRB1P82279 1406 aa29.73■■■□□ 2.35
TRAPPC3-208ENST00000616074 AATKQ6ZMQ8 1374 aa29.73■■■□□ 2.35
TRAPPC3-208ENST00000616074 CAMKK2Q96RR4 588 aa29.71■■■□□ 2.35
TRAPPC3-208ENST00000616074 TTC21BQ7Z4L5 1316 aa29.7■■■□□ 2.34
TRAPPC3-208ENST00000616074 RREB1Q92766 1687 aa29.69■■■□□ 2.34
TRAPPC3-208ENST00000616074 APBA3O96018 575 aa29.69■■■□□ 2.34
TRAPPC3-208ENST00000616074 ZNF692Q9BU19 519 aaPredicted RBP29.69■■■□□ 2.34
TRAPPC3-208ENST00000616074 R3HDM1Q15032 1099 aaKnown RBP29.68■■■□□ 2.34
TRAPPC3-208ENST00000616074 WNK3Q9BYP7 1800 aa29.68■■■□□ 2.34
TRAPPC3-208ENST00000616074 LRRC37A3O60309 1634 aa29.67■■■□□ 2.34
TRAPPC3-208ENST00000616074 CPSF1Q10570 1443 aaKnown RBP29.67■■■□□ 2.34
TRAPPC3-208ENST00000616074 MON2Q7Z3U7 1717 aa29.67■■■□□ 2.34
TRAPPC3-208ENST00000616074 RGPD5Q99666 1765 aa29.67■■■□□ 2.34
TRAPPC3-208ENST00000616074 PARD3Q8TEW0 1356 aa29.65■■■□□ 2.34
TRAPPC3-208ENST00000616074 AXIN2Q9Y2T1 843 aa29.65■■■□□ 2.34
TRAPPC3-208ENST00000616074 NUP188Q5SRE5 1749 aa29.65■■■□□ 2.34
TRAPPC3-208ENST00000616074 PEAK1Q9H792 1746 aa29.65■■■□□ 2.34
TRAPPC3-208ENST00000616074 TTC21AQ8NDW8 1320 aa29.64■■■□□ 2.34
TRAPPC3-208ENST00000616074 SBNO2Q9Y2G9 1366 aa29.64■■■□□ 2.33
TRAPPC3-208ENST00000616074 KTN1Q86UP2 1357 aaKnown RBP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms