RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM228B-208	ENST00000613899	PAK3	O75914	559 aa	Predicted RBP	32.64	■■■□□ 2.82
FAM228B-208	ENST00000613899	GLI3	P10071	1580 aa		32.64	■■■□□ 2.82
FAM228B-208	ENST00000613899	RALGAPB	Q86X10	1494 aa		32.64	■■■□□ 2.82
FAM228B-208	ENST00000613899	ROCK2	O75116	1388 aa	Known RBP	32.61	■■■□□ 2.81
FAM228B-208	ENST00000613899	COL14A1	Q05707	1796 aa	Known RBP	32.6	■■■□□ 2.81
FAM228B-208	ENST00000613899	ACE	P12821	1306 aa		32.59	■■■□□ 2.81
FAM228B-208	ENST00000613899	PLEKHG3	A1L390	1219 aa		32.59	■■■□□ 2.81
FAM228B-208	ENST00000613899	SRPK2	P78362	688 aa	Known RBP	32.59	■■■□□ 2.81
FAM228B-208	ENST00000613899	NRAP	Q86VF7	1730 aa		32.57	■■■□□ 2.81
FAM228B-208	ENST00000613899	VPS72	Q15906	364 aa		32.57	■■■□□ 2.8
FAM228B-208	ENST00000613899	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.56	■■■□□ 2.8
FAM228B-208	ENST00000613899	FAM83G	A6ND36	823 aa		32.56	■■■□□ 2.8
FAM228B-208	ENST00000613899	PPIP5K1	Q6PFW1	1433 aa		32.56	■■■□□ 2.8
FAM228B-208	ENST00000613899	TRIM26	Q12899	539 aa	Predicted RBP	32.54	■■■□□ 2.8
FAM228B-208	ENST00000613899	NBPF8	Q3BBV2	869 aa		32.54	■■■□□ 2.8
FAM228B-208	ENST00000613899	CABP2	Q9NPB3	220 aa		32.52	■■■□□ 2.8
FAM228B-208	ENST00000613899	CCDC9	Q9Y3X0	531 aa	Known RBP	32.51	■■■□□ 2.79
FAM228B-208	ENST00000613899	BTG4	Q9NY30	223 aa		32.49	■■■□□ 2.79
FAM228B-208	ENST00000613899	EVC2	Q86UK5	1308 aa		32.49	■■■□□ 2.79
FAM228B-208	ENST00000613899	TONSL	Q96HA7	1378 aa		32.48	■■■□□ 2.79
FAM228B-208	ENST00000613899	BRD4	O60885	1362 aa	Predicted RBP	32.47	■■■□□ 2.79
FAM228B-208	ENST00000613899	BRWD3	Q6RI45	1802 aa		32.47	■■■□□ 2.79
FAM228B-208	ENST00000613899	PRDM11	Q9NQV5	511 aa		32.47	■■■□□ 2.79
FAM228B-208	ENST00000613899	EP400	Q96L91	3159 aa		32.45	■■■□□ 2.78
FAM228B-208	ENST00000613899	NRK	Q7Z2Y5	1582 aa		32.44	■■■□□ 2.78
FAM228B-208	ENST00000613899	NUTM2G	Q5VZR2	741 aa		32.43	■■■□□ 2.78
FAM228B-208	ENST00000613899	SEPT12	Q8IYM1	358 aa		32.43	■■■□□ 2.78
FAM228B-208	ENST00000613899	ABTB2	Q8N961	1025 aa		32.43	■■■□□ 2.78
FAM228B-208	ENST00000613899	KIAA0232	Q92628	1395 aa		32.43	■■■□□ 2.78
FAM228B-208	ENST00000613899	ONECUT3	O60422	494 aa	Predicted RBP	32.41	■■■□□ 2.78
FAM228B-208	ENST00000613899	USP6	P35125	1406 aa		32.41	■■■□□ 2.78
FAM228B-208	ENST00000613899	CABP1	Q9NZU7	370 aa		32.4	■■■□□ 2.78
FAM228B-208	ENST00000613899	CCDC125	Q86Z20	511 aa		32.39	■■■□□ 2.78
FAM228B-208	ENST00000613899	USP19	O94966	1318 aa		32.39	■■■□□ 2.78
FAM228B-208	ENST00000613899	SBNO2	Q9Y2G9	1366 aa		32.38	■■■□□ 2.77
FAM228B-208	ENST00000613899	CARD11	Q9BXL7	1154 aa		32.37	■■■□□ 2.77
FAM228B-208	ENST00000613899	NLRP13	Q86W25	1043 aa		32.36	■■■□□ 2.77
FAM228B-208	ENST00000613899	ZC3H6	P61129	1189 aa	Known RBP	32.35	■■■□□ 2.77
FAM228B-208	ENST00000613899	SPATA31A5	Q5VU36	1347 aa		32.34	■■■□□ 2.77
FAM228B-208	ENST00000613899	SPATA31A7	Q8IWB4	1347 aa		32.34	■■■□□ 2.77
FAM228B-208	ENST00000613899		A0A0G2JS52	829 aa		32.34	■■■□□ 2.77
FAM228B-208	ENST00000613899	MYT1	Q01538	1121 aa		32.34	■■■□□ 2.77
FAM228B-208	ENST00000613899	CPD	O75976	1380 aa		32.33	■■■□□ 2.77
FAM228B-208	ENST00000613899	AKAP12	Q02952	1782 aa		32.33	■■■□□ 2.77
FAM228B-208	ENST00000613899	CHRNA2	Q15822	529 aa		32.33	■■■□□ 2.77
FAM228B-208	ENST00000613899	FAM98C	Q17RN3	349 aa	Known RBP	32.33	■■■□□ 2.77
FAM228B-208	ENST00000613899	KRT27	Q7Z3Y8	459 aa		32.32	■■■□□ 2.76
FAM228B-208	ENST00000613899	BLM	P54132	1417 aa	Predicted RBP	32.32	■■■□□ 2.76
FAM228B-208	ENST00000613899	SSH2	Q76I76	1423 aa		32.3	■■■□□ 2.76
FAM228B-208	ENST00000613899	PIK3C2A	O00443	1686 aa		32.3	■■■□□ 2.76
FAM228B-208	ENST00000613899	LMO7	Q8WWI1	1683 aa		32.3	■■■□□ 2.76
FAM228B-208	ENST00000613899	THSD7A	Q9UPZ6	1657 aa		32.3	■■■□□ 2.76
FAM228B-208	ENST00000613899	SLIT3	O75094	1523 aa		32.27	■■■□□ 2.76
FAM228B-208	ENST00000613899	GC	P02774	474 aa		32.27	■■■□□ 2.76
FAM228B-208	ENST00000613899	ZNF692	Q9BU19	519 aa	Predicted RBP	32.27	■■■□□ 2.76
FAM228B-208	ENST00000613899	STRN4	Q9NRL3	753 aa		32.27	■■■□□ 2.76
FAM228B-208	ENST00000613899	SPATA31A1	Q5TZJ5	1347 aa		32.26	■■■□□ 2.75
FAM228B-208	ENST00000613899	NLRP6	P59044	892 aa		32.25	■■■□□ 2.75
FAM228B-208	ENST00000613899	CAMTA1	Q9Y6Y1	1673 aa		32.24	■■■□□ 2.75
FAM228B-208	ENST00000613899	CPSF1	Q10570	1443 aa	Known RBP	32.23	■■■□□ 2.75
FAM228B-208	ENST00000613899	MON2	Q7Z3U7	1717 aa		32.23	■■■□□ 2.75
FAM228B-208	ENST00000613899	EVA1C	P58658	441 aa		32.22	■■■□□ 2.75
FAM228B-208	ENST00000613899	SF3B2	Q13435	895 aa	Known RBP	32.21	■■■□□ 2.75
FAM228B-208	ENST00000613899	TTC21B	Q7Z4L5	1316 aa		32.2	■■■□□ 2.74
FAM228B-208	ENST00000613899	TTC21A	Q8NDW8	1320 aa		32.2	■■■□□ 2.74
FAM228B-208	ENST00000613899	KTN1	Q86UP2	1357 aa	Known RBP	32.19	■■■□□ 2.74
FAM228B-208	ENST00000613899	COL5A2	P05997	1499 aa	Predicted RBP	32.17	■■■□□ 2.74
FAM228B-208	ENST00000613899	USP35	Q9P2H5	1018 aa		32.14	■■■□□ 2.74
FAM228B-208	ENST00000613899	AATK	Q6ZMQ8	1374 aa		32.14	■■■□□ 2.74
FAM228B-208	ENST00000613899	RGPD1	P0DJD0	1748 aa		32.14	■■■□□ 2.74
FAM228B-208	ENST00000613899	LARP1	Q6PKG0	1096 aa	Known RBP	32.13	■■■□□ 2.73
FAM228B-208	ENST00000613899	BARGIN	Q6ZT62	677 aa		32.13	■■■□□ 2.73
FAM228B-208	ENST00000613899	ZRANB1	Q9UGI0	708 aa		32.13	■■■□□ 2.73
FAM228B-208	ENST00000613899	ZBTB7C	A1YPR0	619 aa		32.12	■■■□□ 2.73
FAM228B-208	ENST00000613899	KCNH5	Q8NCM2	988 aa		32.12	■■■□□ 2.73
FAM228B-208	ENST00000613899	CD163L1	Q9NR16	1453 aa		32.1	■■■□□ 2.73
FAM228B-208	ENST00000613899	COL18A1	P39060	1754 aa		32.1	■■■□□ 2.73
FAM228B-208	ENST00000613899	TCP11L2	Q8N4U5	519 aa		32.1	■■■□□ 2.73
FAM228B-208	ENST00000613899	PUS7	Q96PZ0	661 aa	Known RBP	32.1	■■■□□ 2.73
FAM228B-208	ENST00000613899	CRB1	P82279	1406 aa		32.09	■■■□□ 2.73
FAM228B-208	ENST00000613899	USP54	Q70EL1	1684 aa		32.09	■■■□□ 2.73
FAM228B-208	ENST00000613899	DEFB132	Q7Z7B7	95 aa		32.09	■■■□□ 2.73
FAM228B-208	ENST00000613899	TMC1	Q8TDI8	760 aa		32.09	■■■□□ 2.73
FAM228B-208	ENST00000613899	THRAP3	Q9Y2W1	955 aa	Known RBP	32.09	■■■□□ 2.73
FAM228B-208	ENST00000613899	SLC24A1	O60721	1099 aa		32.08	■■■□□ 2.73
FAM228B-208	ENST00000613899	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.07	■■■□□ 2.72
FAM228B-208	ENST00000613899	NFAT5	O94916	1531 aa		32.06	■■■□□ 2.72
FAM228B-208	ENST00000613899	PARP4	Q9UKK3	1724 aa	Known RBP	32.06	■■■□□ 2.72
FAM228B-208	ENST00000613899	ST20-MTHFS	A0A0A6YYL1	179 aa		32.05	■■■□□ 2.72
FAM228B-208	ENST00000613899	BAG6	P46379	1132 aa		32.05	■■■□□ 2.72
FAM228B-208	ENST00000613899	FAM182B	Q5T319	152 aa		32.05	■■■□□ 2.72
FAM228B-208	ENST00000613899	NINL	Q9Y2I6	1382 aa		32.05	■■■□□ 2.72
FAM228B-208	ENST00000613899	EDC4	Q6P2E9	1401 aa	Known RBP	32.04	■■■□□ 2.72
FAM228B-208	ENST00000613899	TESK2	Q96S53	571 aa		32.04	■■■□□ 2.72
FAM228B-208	ENST00000613899	TNS1	Q9HBL0	1735 aa	Known RBP	32.03	■■■□□ 2.72
FAM228B-208	ENST00000613899	ARHGEF25	Q86VW2	580 aa		32.03	■■■□□ 2.72
FAM228B-208	ENST00000613899	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.03	■■■□□ 2.72
FAM228B-208	ENST00000613899	TERF2IP	Q9NYB0	399 aa		32.03	■■■□□ 2.72
FAM228B-208	ENST00000613899	ABCC6	O95255	1503 aa		32.03	■■■□□ 2.72
FAM228B-208	ENST00000613899	USP31	Q70CQ4	1352 aa		32.03	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms