RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 A0A1W2PP64 1363 aa18.36■□□□□ 0.53
MDC1-209ENST00000613547 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
MDC1-209ENST00000613547 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
MDC1-209ENST00000613547 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
MDC1-209ENST00000613547 ABTB2Q8N961 1025 aa18.36■□□□□ 0.53
MDC1-209ENST00000613547 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
MDC1-209ENST00000613547 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
MDC1-209ENST00000613547 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
MDC1-209ENST00000613547 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
MDC1-209ENST00000613547 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
MDC1-209ENST00000613547 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
MDC1-209ENST00000613547 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
MDC1-209ENST00000613547 SSH2Q76I76 1423 aa18.33■□□□□ 0.53
MDC1-209ENST00000613547 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.53
MDC1-209ENST00000613547 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
MDC1-209ENST00000613547 NLRP13Q86W25 1043 aa18.33■□□□□ 0.52
MDC1-209ENST00000613547 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
MDC1-209ENST00000613547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
MDC1-209ENST00000613547 AKAP12Q02952 1782 aa18.31■□□□□ 0.52
MDC1-209ENST00000613547 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
MDC1-209ENST00000613547 NLRP6P59044 892 aa18.3■□□□□ 0.52
MDC1-209ENST00000613547 NUTM2GQ5VZR2 741 aa18.3■□□□□ 0.52
MDC1-209ENST00000613547 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
MDC1-209ENST00000613547 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
MDC1-209ENST00000613547 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
MDC1-209ENST00000613547 LRP6O75581 1613 aa18.29■□□□□ 0.52
MDC1-209ENST00000613547 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
MDC1-209ENST00000613547 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
MDC1-209ENST00000613547 MYOM1P52179 1685 aa18.28■□□□□ 0.52
MDC1-209ENST00000613547 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
MDC1-209ENST00000613547 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
MDC1-209ENST00000613547 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
MDC1-209ENST00000613547 USP19O94966 1318 aa18.26■□□□□ 0.51
MDC1-209ENST00000613547 NME9Q86XW9 330 aa18.26■□□□□ 0.51
MDC1-209ENST00000613547 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
MDC1-209ENST00000613547 PANK3Q9H999 370 aa18.25■□□□□ 0.51
MDC1-209ENST00000613547 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
MDC1-209ENST00000613547 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
MDC1-209ENST00000613547 C8orf37Q96NL8 207 aa18.24■□□□□ 0.51
MDC1-209ENST00000613547 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
MDC1-209ENST00000613547 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
MDC1-209ENST00000613547 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
MDC1-209ENST00000613547 GCP02774 474 aa18.23■□□□□ 0.51
MDC1-209ENST00000613547 COG3Q96JB2 828 aa18.23■□□□□ 0.51
MDC1-209ENST00000613547 CARD14Q9BXL6 1004 aa18.23■□□□□ 0.51
MDC1-209ENST00000613547 PRDM11Q9NQV5 511 aa18.21■□□□□ 0.51
MDC1-209ENST00000613547 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
MDC1-209ENST00000613547 SLIT3O75094 1523 aa18.2■□□□□ 0.5
MDC1-209ENST00000613547 FYB1O15117 783 aa18.2■□□□□ 0.5
MDC1-209ENST00000613547 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
MDC1-209ENST00000613547 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
MDC1-209ENST00000613547 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
MDC1-209ENST00000613547 ZNF772Q68DY9 489 aaPredicted RBP18.19■□□□□ 0.5
MDC1-209ENST00000613547 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
MDC1-209ENST00000613547 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
MDC1-209ENST00000613547 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
MDC1-209ENST00000613547 AFF2P51816 1311 aa18.19■□□□□ 0.5
MDC1-209ENST00000613547 SOX12O15370 315 aa18.18■□□□□ 0.5
MDC1-209ENST00000613547 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
MDC1-209ENST00000613547 CRYBG1Q9Y4K1 1723 aa18.18■□□□□ 0.5
MDC1-209ENST00000613547 CPDO75976 1380 aa18.17■□□□□ 0.5
MDC1-209ENST00000613547 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
MDC1-209ENST00000613547 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
MDC1-209ENST00000613547 FNBP4Q8N3X1 1017 aaPredicted RBP18.16■□□□□ 0.5
MDC1-209ENST00000613547 NSD2O96028 1365 aa18.16■□□□□ 0.5
MDC1-209ENST00000613547 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
MDC1-209ENST00000613547 USP21Q9UK80 565 aa18.15■□□□□ 0.5
MDC1-209ENST00000613547 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
MDC1-209ENST00000613547 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
MDC1-209ENST00000613547 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
MDC1-209ENST00000613547 BTG4Q9NY30 223 aa18.13■□□□□ 0.49
MDC1-209ENST00000613547 SLIT2O94813 1529 aa18.13■□□□□ 0.49
MDC1-209ENST00000613547 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
MDC1-209ENST00000613547 ARHGEF25Q86VW2 580 aa18.12■□□□□ 0.49
MDC1-209ENST00000613547 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
MDC1-209ENST00000613547 AATKQ6ZMQ8 1374 aa18.12■□□□□ 0.49
MDC1-209ENST00000613547 NFAT5O94916 1531 aa18.11■□□□□ 0.49
MDC1-209ENST00000613547 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
MDC1-209ENST00000613547 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
MDC1-209ENST00000613547 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
MDC1-209ENST00000613547 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
MDC1-209ENST00000613547 TRPC5Q9UL62 973 aaPredicted RBP18.1■□□□□ 0.49
MDC1-209ENST00000613547 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
MDC1-209ENST00000613547 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
MDC1-209ENST00000613547 BCL9LQ86UU0 1499 aa18.08■□□□□ 0.49
MDC1-209ENST00000613547 EVA1CP58658 441 aa18.08■□□□□ 0.48
MDC1-209ENST00000613547 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
MDC1-209ENST00000613547 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
MDC1-209ENST00000613547 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
MDC1-209ENST00000613547 AMPHP49418 695 aa18.07■□□□□ 0.48
MDC1-209ENST00000613547 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
MDC1-209ENST00000613547 ABCC6O95255 1503 aa18.07■□□□□ 0.48
MDC1-209ENST00000613547 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
MDC1-209ENST00000613547 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
MDC1-209ENST00000613547 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
MDC1-209ENST00000613547 VPS72Q15906 364 aa18.06■□□□□ 0.48
MDC1-209ENST00000613547 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
MDC1-209ENST00000613547 RXRBP28702 533 aa18.05■□□□□ 0.48
MDC1-209ENST00000613547 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
MDC1-209ENST00000613547 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms