RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 TOPAZ1Q8N9V7 1692 aa23.55■■□□□ 1.36
SEMA6C-209ENST00000613223 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
SEMA6C-209ENST00000613223 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
SEMA6C-209ENST00000613223 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
SEMA6C-209ENST00000613223 PNPLA6Q8IY17 1366 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 PIK3R4Q99570 1358 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 E9PSI1 815 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 U2AF1L5P0DN76 240 aaPredicted RBP23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 U2AF1Q01081 240 aaKnown RBP eCLIP23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 B4GALNT3Q6L9W6 998 aa23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 ZNF692Q9BU19 519 aaPredicted RBP23.51■■□□□ 1.35
SEMA6C-209ENST00000613223 NCBP3Q53F19 620 aaKnown RBP23.49■■□□□ 1.35
SEMA6C-209ENST00000613223 WWC1Q8IX03 1113 aa23.49■■□□□ 1.35
SEMA6C-209ENST00000613223 TCP11L2Q8N4U5 519 aa23.49■■□□□ 1.35
SEMA6C-209ENST00000613223 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
SEMA6C-209ENST00000613223 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
SEMA6C-209ENST00000613223 NME9Q86XW9 330 aa23.46■■□□□ 1.35
SEMA6C-209ENST00000613223 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
SEMA6C-209ENST00000613223 NRKQ7Z2Y5 1582 aa23.46■■□□□ 1.35
SEMA6C-209ENST00000613223 SETD1BQ9UPS6 1966 aaKnown RBP23.46■■□□□ 1.35
SEMA6C-209ENST00000613223 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.35
SEMA6C-209ENST00000613223 CCDC27Q2M243 656 aa23.45■■□□□ 1.35
SEMA6C-209ENST00000613223 AATKQ6ZMQ8 1374 aa23.45■■□□□ 1.34
SEMA6C-209ENST00000613223 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
SEMA6C-209ENST00000613223 POLKQ9UBT6 870 aa23.44■■□□□ 1.34
SEMA6C-209ENST00000613223 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-209ENST00000613223 ANKLE2Q86XL3 938 aa23.43■■□□□ 1.34
SEMA6C-209ENST00000613223 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
SEMA6C-209ENST00000613223 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-209ENST00000613223 COG3Q96JB2 828 aa23.42■■□□□ 1.34
SEMA6C-209ENST00000613223 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
SEMA6C-209ENST00000613223 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 ACEP12821 1306 aa23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 NEUROD2Q15784 382 aa23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 USP6P35125 1406 aa23.41■■□□□ 1.34
SEMA6C-209ENST00000613223 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
SEMA6C-209ENST00000613223 EXOC6Q8TAG9 804 aa23.4■■□□□ 1.34
SEMA6C-209ENST00000613223 MSH5O43196 834 aa23.39■■□□□ 1.33
SEMA6C-209ENST00000613223 KCNA6P17658 529 aa23.39■■□□□ 1.33
SEMA6C-209ENST00000613223 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
SEMA6C-209ENST00000613223 TTC21BQ7Z4L5 1316 aa23.39■■□□□ 1.33
SEMA6C-209ENST00000613223 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
SEMA6C-209ENST00000613223 PNNQ9H307 717 aaKnown RBP23.38■■□□□ 1.33
SEMA6C-209ENST00000613223 PLIN1O60240 522 aa23.38■■□□□ 1.33
SEMA6C-209ENST00000613223 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
SEMA6C-209ENST00000613223 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
SEMA6C-209ENST00000613223 MAPK8IP3Q9UPT6 1336 aa23.36■■□□□ 1.33
SEMA6C-209ENST00000613223 FBLN1P23142 703 aa23.36■■□□□ 1.33
SEMA6C-209ENST00000613223 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
SEMA6C-209ENST00000613223 EMILIN1Q9Y6C2 1016 aa23.36■■□□□ 1.33
SEMA6C-209ENST00000613223 SSH2Q76I76 1423 aa23.35■■□□□ 1.33
SEMA6C-209ENST00000613223 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
SEMA6C-209ENST00000613223 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
SEMA6C-209ENST00000613223 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
SEMA6C-209ENST00000613223 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
SEMA6C-209ENST00000613223 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.33
SEMA6C-209ENST00000613223 FCHSD2O94868 740 aa23.33■■□□□ 1.33
SEMA6C-209ENST00000613223 TMPOP42166 694 aaKnown RBP23.32■■□□□ 1.32
SEMA6C-209ENST00000613223 NALCNQ8IZF0 1738 aa23.32■■□□□ 1.32
SEMA6C-209ENST00000613223 RGPD8O14715 1765 aaPredicted RBP23.32■■□□□ 1.32
SEMA6C-209ENST00000613223 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
SEMA6C-209ENST00000613223 CRBNQ96SW2 442 aa23.3■■□□□ 1.32
SEMA6C-209ENST00000613223 NPHP4O75161 1426 aaPredicted RBP23.3■■□□□ 1.32
SEMA6C-209ENST00000613223 IL13P35225 146 aa23.29■■□□□ 1.32
SEMA6C-209ENST00000613223 RSPH6AQ9H0K4 717 aa23.29■■□□□ 1.32
SEMA6C-209ENST00000613223 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
SEMA6C-209ENST00000613223 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
SEMA6C-209ENST00000613223 USP31Q70CQ4 1352 aa23.28■■□□□ 1.32
SEMA6C-209ENST00000613223 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
SEMA6C-209ENST00000613223 C20orf194Q5TEA3 1177 aa23.27■■□□□ 1.32
SEMA6C-209ENST00000613223 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
SEMA6C-209ENST00000613223 TRIM35Q9UPQ4 493 aa23.27■■□□□ 1.32
SEMA6C-209ENST00000613223 NEFMP07197 916 aa23.25■■□□□ 1.31
SEMA6C-209ENST00000613223 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
SEMA6C-209ENST00000613223 IL16Q14005 1332 aa23.25■■□□□ 1.31
SEMA6C-209ENST00000613223 BCAR3O75815 825 aa23.24■■□□□ 1.31
SEMA6C-209ENST00000613223 RIPK4P57078 832 aa23.24■■□□□ 1.31
SEMA6C-209ENST00000613223 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
SEMA6C-209ENST00000613223 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
SEMA6C-209ENST00000613223 HMOX1P09601 288 aa23.21■■□□□ 1.31
SEMA6C-209ENST00000613223 NWD1Q149M9 1564 aa23.2■■□□□ 1.3
SEMA6C-209ENST00000613223 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
SEMA6C-209ENST00000613223 PEAK1Q9H792 1746 aa23.19■■□□□ 1.3
SEMA6C-209ENST00000613223 CT47B1P0C2W7 299 aaPredicted RBP23.19■■□□□ 1.3
SEMA6C-209ENST00000613223 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
SEMA6C-209ENST00000613223 NFE2L2Q16236 605 aa23.18■■□□□ 1.3
SEMA6C-209ENST00000613223 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
SEMA6C-209ENST00000613223 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
SEMA6C-209ENST00000613223 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
SEMA6C-209ENST00000613223 EIF4A2Q14240 407 aaKnown RBP23.16■■□□□ 1.3
SEMA6C-209ENST00000613223 TSR2Q969E8 191 aaKnown RBP23.14■■□□□ 1.3
SEMA6C-209ENST00000613223 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.29
SEMA6C-209ENST00000613223 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
SEMA6C-209ENST00000613223 RGPD1P0DJD0 1748 aa23.13■■□□□ 1.29
SEMA6C-209ENST00000613223 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
SEMA6C-209ENST00000613223 MARF1Q9Y4F3 1742 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms