RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TOPAZ1Q8N9V7 1692 aa24.91■■□□□ 1.58
PRKN-209ENST00000612485 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
PRKN-209ENST00000612485 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
PRKN-209ENST00000612485 GLI3P10071 1580 aa24.91■■□□□ 1.58
PRKN-209ENST00000612485 ACEP12821 1306 aa24.9■■□□□ 1.58
PRKN-209ENST00000612485 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.58
PRKN-209ENST00000612485 CCDC9Q9Y3X0 531 aaKnown RBP24.89■■□□□ 1.58
PRKN-209ENST00000612485 TRPM1Q7Z4N2 1603 aa24.88■■□□□ 1.57
PRKN-209ENST00000612485 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
PRKN-209ENST00000612485 QRICH2Q9H0J4 1663 aa24.87■■□□□ 1.57
PRKN-209ENST00000612485 CABP2Q9NPB3 220 aa24.86■■□□□ 1.57
PRKN-209ENST00000612485 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
PRKN-209ENST00000612485 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
PRKN-209ENST00000612485 PPIP5K1Q6PFW1 1433 aa24.85■■□□□ 1.57
PRKN-209ENST00000612485 CRYBG1Q9Y4K1 1723 aa24.84■■□□□ 1.57
PRKN-209ENST00000612485 PRDM11Q9NQV5 511 aa24.83■■□□□ 1.57
PRKN-209ENST00000612485 SEPT12Q8IYM1 358 aa24.82■■□□□ 1.56
PRKN-209ENST00000612485 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
PRKN-209ENST00000612485 NRAPQ86VF7 1730 aa24.81■■□□□ 1.56
PRKN-209ENST00000612485 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
PRKN-209ENST00000612485 CCDC125Q86Z20 511 aa24.81■■□□□ 1.56
PRKN-209ENST00000612485 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
PRKN-209ENST00000612485 NUTM2GQ5VZR2 741 aa24.8■■□□□ 1.56
PRKN-209ENST00000612485 ABTB2Q8N961 1025 aa24.8■■□□□ 1.56
PRKN-209ENST00000612485 EP400Q96L91 3159 aa24.79■■□□□ 1.56
PRKN-209ENST00000612485 BRD4O60885 1362 aaPredicted RBP24.79■■□□□ 1.56
PRKN-209ENST00000612485 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
PRKN-209ENST00000612485 PHRF1Q9P1Y6 1649 aaKnown RBP24.79■■□□□ 1.56
PRKN-209ENST00000612485 CABP1Q9NZU7 370 aa24.77■■□□□ 1.56
PRKN-209ENST00000612485 TONSLQ96HA7 1378 aa24.77■■□□□ 1.56
PRKN-209ENST00000612485 A0A0G2JS52 829 aa24.75■■□□□ 1.55
PRKN-209ENST00000612485 ZC3H6P61129 1189 aaKnown RBP24.75■■□□□ 1.55
PRKN-209ENST00000612485 MYT1Q01538 1121 aa24.75■■□□□ 1.55
PRKN-209ENST00000612485 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
PRKN-209ENST00000612485 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
PRKN-209ENST00000612485 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
PRKN-209ENST00000612485 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
PRKN-209ENST00000612485 SPATA31A5Q5VU36 1347 aa24.74■■□□□ 1.55
PRKN-209ENST00000612485 SPATA31A7Q8IWB4 1347 aa24.74■■□□□ 1.55
PRKN-209ENST00000612485 USP19O94966 1318 aa24.73■■□□□ 1.55
PRKN-209ENST00000612485 CHRNA2Q15822 529 aa24.73■■□□□ 1.55
PRKN-209ENST00000612485 USP6P35125 1406 aa24.72■■□□□ 1.55
PRKN-209ENST00000612485 BLMP54132 1417 aaPredicted RBP24.71■■□□□ 1.55
PRKN-209ENST00000612485 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
PRKN-209ENST00000612485 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
PRKN-209ENST00000612485 CPDO75976 1380 aa24.69■■□□□ 1.54
PRKN-209ENST00000612485 STRN4Q9NRL3 753 aa24.69■■□□□ 1.54
PRKN-209ENST00000612485 GCP02774 474 aa24.68■■□□□ 1.54
PRKN-209ENST00000612485 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
PRKN-209ENST00000612485 SBNO2Q9Y2G9 1366 aa24.67■■□□□ 1.54
PRKN-209ENST00000612485 EVA1CP58658 441 aa24.67■■□□□ 1.54
PRKN-209ENST00000612485 SF3B2Q13435 895 aaKnown RBP24.67■■□□□ 1.54
PRKN-209ENST00000612485 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
PRKN-209ENST00000612485 NLRP6P59044 892 aa24.66■■□□□ 1.54
PRKN-209ENST00000612485 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
PRKN-209ENST00000612485 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
PRKN-209ENST00000612485 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
PRKN-209ENST00000612485 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
PRKN-209ENST00000612485 SLIT3O75094 1523 aa24.61■■□□□ 1.53
PRKN-209ENST00000612485 TTC21BQ7Z4L5 1316 aa24.61■■□□□ 1.53
PRKN-209ENST00000612485 LMO7Q8WWI1 1683 aa24.6■■□□□ 1.53
PRKN-209ENST00000612485 USP35Q9P2H5 1018 aa24.59■■□□□ 1.53
PRKN-209ENST00000612485 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
PRKN-209ENST00000612485 CPSF1Q10570 1443 aaKnown RBP24.59■■□□□ 1.53
PRKN-209ENST00000612485 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
PRKN-209ENST00000612485 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
PRKN-209ENST00000612485 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
PRKN-209ENST00000612485 BARGINQ6ZT62 677 aa24.58■■□□□ 1.53
PRKN-209ENST00000612485 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
PRKN-209ENST00000612485 KTN1Q86UP2 1357 aaKnown RBP24.57■■□□□ 1.52
PRKN-209ENST00000612485 ZBTB7CA1YPR0 619 aa24.57■■□□□ 1.52
PRKN-209ENST00000612485 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
PRKN-209ENST00000612485 AATKQ6ZMQ8 1374 aa24.55■■□□□ 1.52
PRKN-209ENST00000612485 KCNH5Q8NCM2 988 aa24.55■■□□□ 1.52
PRKN-209ENST00000612485 THRAP3Q9Y2W1 955 aaKnown RBP24.55■■□□□ 1.52
PRKN-209ENST00000612485 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
PRKN-209ENST00000612485 BAG6P46379 1132 aa24.54■■□□□ 1.52
PRKN-209ENST00000612485 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
PRKN-209ENST00000612485 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
PRKN-209ENST00000612485 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
PRKN-209ENST00000612485 HDGFL2Q7Z4V5 671 aaPredicted RBP24.51■■□□□ 1.51
PRKN-209ENST00000612485 CRB1P82279 1406 aa24.51■■□□□ 1.51
PRKN-209ENST00000612485 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
PRKN-209ENST00000612485 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
PRKN-209ENST00000612485 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PRKN-209ENST00000612485 FAM196AQ6ZSG2 479 aa24.5■■□□□ 1.51
PRKN-209ENST00000612485 RGPD1P0DJD0 1748 aa24.49■■□□□ 1.51
PRKN-209ENST00000612485 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
PRKN-209ENST00000612485 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
PRKN-209ENST00000612485 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
PRKN-209ENST00000612485 SOX12O15370 315 aa24.47■■□□□ 1.51
PRKN-209ENST00000612485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.47■■□□□ 1.51
PRKN-209ENST00000612485 SLC12A5Q9H2X9 1139 aa24.47■■□□□ 1.51
PRKN-209ENST00000612485 TERF2IPQ9NYB0 399 aa24.47■■□□□ 1.51
PRKN-209ENST00000612485 TOM1L2Q6ZVM7 507 aa24.46■■□□□ 1.51
PRKN-209ENST00000612485 TESK2Q96S53 571 aa24.46■■□□□ 1.51
PRKN-209ENST00000612485 COL18A1P39060 1754 aa24.46■■□□□ 1.51
PRKN-209ENST00000612485 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
PRKN-209ENST00000612485 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.5
PRKN-209ENST00000612485 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms