RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GJD4Q96KN9 370 aaPredicted RBP26.02■■□□□ 1.76
VCX3A-203ENST00000612369 ACEP12821 1306 aa26.02■■□□□ 1.76
VCX3A-203ENST00000612369 TONSLQ96HA7 1378 aa26.02■■□□□ 1.76
VCX3A-203ENST00000612369 PLEKHG5O94827 1062 aa26.01■■□□□ 1.75
VCX3A-203ENST00000612369 CABP2Q9NPB3 220 aa25.99■■□□□ 1.75
VCX3A-203ENST00000612369 NWD2Q9ULI1 1742 aa25.99■■□□□ 1.75
VCX3A-203ENST00000612369 EVC2Q86UK5 1308 aa25.98■■□□□ 1.75
VCX3A-203ENST00000612369 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
VCX3A-203ENST00000612369 FAM83GA6ND36 823 aa25.96■■□□□ 1.75
VCX3A-203ENST00000612369 BRD4O60885 1362 aaPredicted RBP25.95■■□□□ 1.75
VCX3A-203ENST00000612369 VPS72Q15906 364 aa25.95■■□□□ 1.74
VCX3A-203ENST00000612369 PLCH1Q4KWH8 1693 aa25.95■■□□□ 1.74
VCX3A-203ENST00000612369 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
VCX3A-203ENST00000612369 RALGAPBQ86X10 1494 aa25.93■■□□□ 1.74
VCX3A-203ENST00000612369 ATAD2Q6PL18 1390 aa25.93■■□□□ 1.74
VCX3A-203ENST00000612369 CARD11Q9BXL7 1154 aa25.92■■□□□ 1.74
VCX3A-203ENST00000612369 COL14A1Q05707 1796 aaKnown RBP25.92■■□□□ 1.74
VCX3A-203ENST00000612369 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
VCX3A-203ENST00000612369 GLI3P10071 1580 aa25.9■■□□□ 1.74
VCX3A-203ENST00000612369 ABTB2Q8N961 1025 aa25.9■■□□□ 1.74
VCX3A-203ENST00000612369 SBNO2Q9Y2G9 1366 aa25.9■■□□□ 1.74
VCX3A-203ENST00000612369 BTG4Q9NY30 223 aa25.89■■□□□ 1.74
VCX3A-203ENST00000612369 PRDM11Q9NQV5 511 aa25.87■■□□□ 1.73
VCX3A-203ENST00000612369 CCDC9Q9Y3X0 531 aaKnown RBP25.87■■□□□ 1.73
VCX3A-203ENST00000612369 PHRF1Q9P1Y6 1649 aaKnown RBP25.86■■□□□ 1.73
VCX3A-203ENST00000612369 ONECUT3O60422 494 aaPredicted RBP25.86■■□□□ 1.73
VCX3A-203ENST00000612369 NLRP13Q86W25 1043 aa25.86■■□□□ 1.73
VCX3A-203ENST00000612369 NRAPQ86VF7 1730 aa25.85■■□□□ 1.73
VCX3A-203ENST00000612369 NUTM2GQ5VZR2 741 aa25.85■■□□□ 1.73
VCX3A-203ENST00000612369 ZNF692Q9BU19 519 aaPredicted RBP25.85■■□□□ 1.73
VCX3A-203ENST00000612369 USP6P35125 1406 aa25.84■■□□□ 1.73
VCX3A-203ENST00000612369 KIAA0232Q92628 1395 aa25.83■■□□□ 1.73
VCX3A-203ENST00000612369 USP19O94966 1318 aa25.83■■□□□ 1.73
VCX3A-203ENST00000612369 SEPT12Q8IYM1 358 aa25.81■■□□□ 1.72
VCX3A-203ENST00000612369 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
VCX3A-203ENST00000612369 SSH2Q76I76 1423 aa25.8■■□□□ 1.72
VCX3A-203ENST00000612369 CCDC125Q86Z20 511 aa25.79■■□□□ 1.72
VCX3A-203ENST00000612369 CPDO75976 1380 aa25.78■■□□□ 1.72
VCX3A-203ENST00000612369 NRKQ7Z2Y5 1582 aa25.78■■□□□ 1.72
VCX3A-203ENST00000612369 GCP02774 474 aa25.77■■□□□ 1.72
VCX3A-203ENST00000612369 SPATA31A5Q5VU36 1347 aa25.77■■□□□ 1.72
VCX3A-203ENST00000612369 SPATA31A7Q8IWB4 1347 aa25.77■■□□□ 1.72
VCX3A-203ENST00000612369 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
VCX3A-203ENST00000612369 SLC24A1O60721 1099 aa25.76■■□□□ 1.71
VCX3A-203ENST00000612369 NLRP6P59044 892 aa25.76■■□□□ 1.71
VCX3A-203ENST00000612369 CHRNA2Q15822 529 aa25.76■■□□□ 1.71
VCX3A-203ENST00000612369 CPSF1Q10570 1443 aaKnown RBP25.75■■□□□ 1.71
VCX3A-203ENST00000612369 PUS7Q96PZ0 661 aaKnown RBP25.75■■□□□ 1.71
VCX3A-203ENST00000612369 TIMELESSQ9UNS1 1208 aa25.75■■□□□ 1.71
VCX3A-203ENST00000612369 BRWD3Q6RI45 1802 aa25.74■■□□□ 1.71
VCX3A-203ENST00000612369 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
VCX3A-203ENST00000612369 EP400Q96L91 3159 aa25.74■■□□□ 1.71
VCX3A-203ENST00000612369 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
VCX3A-203ENST00000612369 TTC21AQ8NDW8 1320 aa25.73■■□□□ 1.71
VCX3A-203ENST00000612369 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
VCX3A-203ENST00000612369 KRT27Q7Z3Y8 459 aa25.72■■□□□ 1.71
VCX3A-203ENST00000612369 SLIT3O75094 1523 aa25.71■■□□□ 1.71
VCX3A-203ENST00000612369 KTN1Q86UP2 1357 aaKnown RBP25.7■■□□□ 1.71
VCX3A-203ENST00000612369 SPATA31A1Q5TZJ5 1347 aa25.7■■□□□ 1.71
VCX3A-203ENST00000612369 A0A0G2JS52 829 aa25.7■■□□□ 1.7
VCX3A-203ENST00000612369 EVA1CP58658 441 aa25.7■■□□□ 1.7
VCX3A-203ENST00000612369 MYT1Q01538 1121 aa25.7■■□□□ 1.7
VCX3A-203ENST00000612369 STRN4Q9NRL3 753 aa25.7■■□□□ 1.7
VCX3A-203ENST00000612369 PIK3C2AO00443 1686 aa25.7■■□□□ 1.7
VCX3A-203ENST00000612369 LMO7Q8WWI1 1683 aa25.68■■□□□ 1.7
VCX3A-203ENST00000612369 ST20-MTHFSA0A0A6YYL1 179 aa25.68■■□□□ 1.7
VCX3A-203ENST00000612369 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
VCX3A-203ENST00000612369 CAMTA1Q9Y6Y1 1673 aa25.68■■□□□ 1.7
VCX3A-203ENST00000612369 BLMP54132 1417 aaPredicted RBP25.67■■□□□ 1.7
VCX3A-203ENST00000612369 KCNH5Q8NCM2 988 aa25.67■■□□□ 1.7
VCX3A-203ENST00000612369 TESK2Q96S53 571 aa25.67■■□□□ 1.7
VCX3A-203ENST00000612369 TMC1Q8TDI8 760 aa25.66■■□□□ 1.7
VCX3A-203ENST00000612369 MON2Q7Z3U7 1717 aa25.66■■□□□ 1.7
VCX3A-203ENST00000612369 HDGFL2Q7Z4V5 671 aaPredicted RBP25.65■■□□□ 1.7
VCX3A-203ENST00000612369 AATKQ6ZMQ8 1374 aa25.65■■□□□ 1.7
VCX3A-203ENST00000612369 THSD7AQ9UPZ6 1657 aa25.64■■□□□ 1.69
VCX3A-203ENST00000612369 BARGINQ6ZT62 677 aa25.63■■□□□ 1.69
VCX3A-203ENST00000612369 SLC12A5Q9H2X9 1139 aa25.63■■□□□ 1.69
VCX3A-203ENST00000612369 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
VCX3A-203ENST00000612369 CD163L1Q9NR16 1453 aa25.63■■□□□ 1.69
VCX3A-203ENST00000612369 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
VCX3A-203ENST00000612369 SF3B2Q13435 895 aaKnown RBP25.61■■□□□ 1.69
VCX3A-203ENST00000612369 LARP1Q6PKG0 1096 aaKnown RBP25.61■■□□□ 1.69
VCX3A-203ENST00000612369 THRAP3Q9Y2W1 955 aaKnown RBP25.61■■□□□ 1.69
VCX3A-203ENST00000612369 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
VCX3A-203ENST00000612369 USP31Q70CQ4 1352 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 USP47Q96K76 1375 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 ZBTB7CA1YPR0 619 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 ARHGEF25Q86VW2 580 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 TCP11L2Q8N4U5 519 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 USP35Q9P2H5 1018 aa25.59■■□□□ 1.69
VCX3A-203ENST00000612369 EDC4Q6P2E9 1401 aaKnown RBP25.58■■□□□ 1.69
VCX3A-203ENST00000612369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.58■■□□□ 1.69
VCX3A-203ENST00000612369 CRB1P82279 1406 aa25.56■■□□□ 1.68
VCX3A-203ENST00000612369 TMF1P82094 1093 aa25.56■■□□□ 1.68
VCX3A-203ENST00000612369 COL18A1P39060 1754 aa25.56■■□□□ 1.68
VCX3A-203ENST00000612369 A0A1W2PP64 1363 aa25.56■■□□□ 1.68
VCX3A-203ENST00000612369 USP54Q70EL1 1684 aa25.55■■□□□ 1.68
VCX3A-203ENST00000612369 NFAT5O94916 1531 aa25.53■■□□□ 1.68
VCX3A-203ENST00000612369 NME9Q86XW9 330 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms