RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 MARF1Q9Y4F3 1742 aaKnown RBP36.68■■■■□ 3.46
VEGFA-226ENST00000611736 ATAD2Q6PL18 1390 aa36.68■■■■□ 3.46
VEGFA-226ENST00000611736 TESK2Q96S53 571 aa36.67■■■■□ 3.46
VEGFA-226ENST00000611736 ABCA3Q99758 1704 aa36.66■■■■□ 3.46
VEGFA-226ENST00000611736 NUTM2GQ5VZR2 741 aa36.6■■■■□ 3.45
VEGFA-226ENST00000611736 USP6P35125 1406 aa36.59■■■■□ 3.45
VEGFA-226ENST00000611736 USP21Q9UK80 565 aa36.58■■■■□ 3.45
VEGFA-226ENST00000611736 FNBP4Q8N3X1 1017 aaPredicted RBP36.57■■■■□ 3.44
VEGFA-226ENST00000611736 ABTB2Q8N961 1025 aa36.56■■■■□ 3.44
VEGFA-226ENST00000611736 TMC1Q8TDI8 760 aa36.56■■■■□ 3.44
VEGFA-226ENST00000611736 AKAP12Q02952 1782 aa36.55■■■■□ 3.44
VEGFA-226ENST00000611736 CRYBG1Q9Y4K1 1723 aa36.54■■■■□ 3.44
VEGFA-226ENST00000611736 SLC24A1O60721 1099 aa36.54■■■■□ 3.44
VEGFA-226ENST00000611736 BRD4O60885 1362 aaPredicted RBP36.53■■■■□ 3.44
VEGFA-226ENST00000611736 QTRT2Q9H974 415 aaKnown RBP36.53■■■■□ 3.44
VEGFA-226ENST00000611736 PUS7Q96PZ0 661 aaKnown RBP36.51■■■■□ 3.44
VEGFA-226ENST00000611736 ZNF692Q9BU19 519 aaPredicted RBP36.51■■■■□ 3.44
VEGFA-226ENST00000611736 TMF1P82094 1093 aa36.5■■■■□ 3.43
VEGFA-226ENST00000611736 CPSF1Q10570 1443 aaKnown RBP36.5■■■■□ 3.43
VEGFA-226ENST00000611736 RXRBP28702 533 aa36.49■■■■□ 3.43
VEGFA-226ENST00000611736 SLC12A5Q9H2X9 1139 aa36.49■■■■□ 3.43
VEGFA-226ENST00000611736 KTN1Q86UP2 1357 aaKnown RBP36.48■■■■□ 3.43
VEGFA-226ENST00000611736 SSH2Q76I76 1423 aa36.48■■■■□ 3.43
VEGFA-226ENST00000611736 BCL9LQ86UU0 1499 aa36.48■■■■□ 3.43
VEGFA-226ENST00000611736 PHRF1Q9P1Y6 1649 aaKnown RBP36.48■■■■□ 3.43
VEGFA-226ENST00000611736 SLIT2O94813 1529 aa36.46■■■■□ 3.43
VEGFA-226ENST00000611736 TRPC5Q9UL62 973 aaPredicted RBP36.46■■■■□ 3.43
VEGFA-226ENST00000611736 FAM83GA6ND36 823 aa36.45■■■■□ 3.43
VEGFA-226ENST00000611736 PLCH1Q4KWH8 1693 aa36.45■■■■□ 3.42
VEGFA-226ENST00000611736 CD163L1Q9NR16 1453 aa36.44■■■■□ 3.42
VEGFA-226ENST00000611736 TTC21BQ7Z4L5 1316 aa36.44■■■■□ 3.42
VEGFA-226ENST00000611736 MON2Q7Z3U7 1717 aa36.44■■■■□ 3.42
VEGFA-226ENST00000611736 NLRP13Q86W25 1043 aa36.43■■■■□ 3.42
VEGFA-226ENST00000611736 ATRNO75882 1429 aa36.42■■■■□ 3.42
VEGFA-226ENST00000611736 NRKQ7Z2Y5 1582 aa36.42■■■■□ 3.42
VEGFA-226ENST00000611736 RBM6P78332 1123 aaKnown RBP36.42■■■■□ 3.42
VEGFA-226ENST00000611736 HDGFL2Q7Z4V5 671 aaPredicted RBP36.42■■■■□ 3.42
VEGFA-226ENST00000611736 PIK3C2AO00443 1686 aa36.42■■■■□ 3.42
VEGFA-226ENST00000611736 USP19O94966 1318 aa36.41■■■■□ 3.42
VEGFA-226ENST00000611736 NLRP6P59044 892 aa36.41■■■■□ 3.42
VEGFA-226ENST00000611736 UNC5CLQ8IV45 518 aa36.41■■■■□ 3.42
VEGFA-226ENST00000611736 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.4■■■■□ 3.42
VEGFA-226ENST00000611736 PRDM11Q9NQV5 511 aa36.4■■■■□ 3.42
VEGFA-226ENST00000611736 ZC3H6P61129 1189 aaKnown RBP36.39■■■■□ 3.42
VEGFA-226ENST00000611736 EIF4G2P78344 907 aaKnown RBP eCLIP36.39■■■■□ 3.42
VEGFA-226ENST00000611736 TERF2IPQ9NYB0 399 aa36.39■■■■□ 3.42
VEGFA-226ENST00000611736 NWD2Q9ULI1 1742 aa36.39■■■■□ 3.42
VEGFA-226ENST00000611736 KIAA0232Q92628 1395 aa36.39■■■■□ 3.42
VEGFA-226ENST00000611736 NINLQ9Y2I6 1382 aa36.39■■■■□ 3.42
VEGFA-226ENST00000611736 COL14A1Q05707 1796 aaKnown RBP36.38■■■■□ 3.41
VEGFA-226ENST00000611736 A0A1W2PP64 1363 aa36.38■■■■□ 3.41
VEGFA-226ENST00000611736 TTC21AQ8NDW8 1320 aa36.37■■■■□ 3.41
VEGFA-226ENST00000611736 HSPA5P11021 654 aaKnown RBP36.36■■■■□ 3.41
VEGFA-226ENST00000611736 CDCA8Q53HL2 280 aa36.36■■■■□ 3.41
VEGFA-226ENST00000611736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.36■■■■□ 3.41
VEGFA-226ENST00000611736 CDK12Q9NYV4 1490 aaPredicted RBP36.36■■■■□ 3.41
VEGFA-226ENST00000611736 CHRNA2Q15822 529 aa36.34■■■■□ 3.41
VEGFA-226ENST00000611736 BTG4Q9NY30 223 aa36.34■■■■□ 3.41
VEGFA-226ENST00000611736 GCP02774 474 aa36.32■■■■□ 3.4
VEGFA-226ENST00000611736 EDC4Q6P2E9 1401 aaKnown RBP36.31■■■■□ 3.4
VEGFA-226ENST00000611736 GJD4Q96KN9 370 aaPredicted RBP36.3■■■■□ 3.4
VEGFA-226ENST00000611736 NRAPQ86VF7 1730 aa36.3■■■■□ 3.4
VEGFA-226ENST00000611736 SLIT3O75094 1523 aa36.29■■■■□ 3.4
VEGFA-226ENST00000611736 RGS12O14924 1447 aa36.29■■■■□ 3.4
VEGFA-226ENST00000611736 NME9Q86XW9 330 aa36.28■■■■□ 3.4
VEGFA-226ENST00000611736 VPS72Q15906 364 aa36.27■■■■□ 3.4
VEGFA-226ENST00000611736 ZRANB1Q9UGI0 708 aa36.27■■■■□ 3.4
VEGFA-226ENST00000611736 CCDC9Q9Y3X0 531 aaKnown RBP36.27■■■■□ 3.4
VEGFA-226ENST00000611736 CPDO75976 1380 aa36.27■■■■□ 3.4
VEGFA-226ENST00000611736 ANKRD36BQ8N2N9 1353 aa36.26■■■■□ 3.39
VEGFA-226ENST00000611736 ZBTB7CA1YPR0 619 aa36.24■■■■□ 3.39
VEGFA-226ENST00000611736 SOX12O15370 315 aa36.24■■■■□ 3.39
VEGFA-226ENST00000611736 GLI3P10071 1580 aa36.23■■■■□ 3.39
VEGFA-226ENST00000611736 POLR3GLQ9BT43 218 aa36.23■■■■□ 3.39
VEGFA-226ENST00000611736 MYOM1P52179 1685 aa36.2■■■■□ 3.39
VEGFA-226ENST00000611736 USP31Q70CQ4 1352 aa36.2■■■■□ 3.39
VEGFA-226ENST00000611736 STRN4Q9NRL3 753 aa36.19■■■■□ 3.38
VEGFA-226ENST00000611736 KCNH5Q8NCM2 988 aa36.18■■■■□ 3.38
VEGFA-226ENST00000611736 USP54Q70EL1 1684 aa36.17■■■■□ 3.38
VEGFA-226ENST00000611736 LMO7Q8WWI1 1683 aa36.16■■■■□ 3.38
VEGFA-226ENST00000611736 CAMTA1Q9Y6Y1 1673 aa36.16■■■■□ 3.38
VEGFA-226ENST00000611736 NFAT5O94916 1531 aa36.14■■■■□ 3.38
VEGFA-226ENST00000611736 EVA1CP58658 441 aa36.13■■■■□ 3.37
VEGFA-226ENST00000611736 ARHGEF25Q86VW2 580 aa36.11■■■■□ 3.37
VEGFA-226ENST00000611736 AATKQ6ZMQ8 1374 aa36.11■■■■□ 3.37
VEGFA-226ENST00000611736 SPATA31A5Q5VU36 1347 aa36.1■■■■□ 3.37
VEGFA-226ENST00000611736 SPATA31A7Q8IWB4 1347 aa36.1■■■■□ 3.37
VEGFA-226ENST00000611736 OVOS2A0A0J9YW53 1432 aa36.1■■■■□ 3.37
VEGFA-226ENST00000611736 OVOS2Q6IE36 1432 aa36.1■■■■□ 3.37
VEGFA-226ENST00000611736 UPF1Q92900 1129 aaKnown RBP eCLIP36.1■■■■□ 3.37
VEGFA-226ENST00000611736 COL18A1P39060 1754 aa36.07■■■■□ 3.37
VEGFA-226ENST00000611736 FAM98CQ17RN3 349 aaKnown RBP36.07■■■■□ 3.36
VEGFA-226ENST00000611736 COL5A2P05997 1499 aaPredicted RBP36.06■■■■□ 3.36
VEGFA-226ENST00000611736 C11orf95C9JLR9 678 aaPredicted RBP36.06■■■■□ 3.36
VEGFA-226ENST00000611736 COG3Q96JB2 828 aa36.06■■■■□ 3.36
VEGFA-226ENST00000611736 CARD14Q9BXL6 1004 aa36.06■■■■□ 3.36
VEGFA-226ENST00000611736 LARP1Q6PKG0 1096 aaKnown RBP36.05■■■■□ 3.36
VEGFA-226ENST00000611736 SEPT12Q8IYM1 358 aa36.05■■■■□ 3.36
VEGFA-226ENST00000611736 A0A0G2JS52 829 aa36.04■■■■□ 3.36
VEGFA-226ENST00000611736 MYT1Q01538 1121 aa36.04■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms