RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ST18O60284 1047 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
LIG4-204ENST00000611712 SULT6B1Q6IMI4 303 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 ABCC11Q96J66 1382 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 PRDM15P57071 1507 aaPredicted RBP10.75□□□□□ -0.69
LIG4-204ENST00000611712 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 MYO5CQ9NQX4 1742 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
LIG4-204ENST00000611712 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
LIG4-204ENST00000611712 ZNF521Q96K83 1311 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 CDC45O75419 566 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 NME9Q86XW9 330 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 TSPYL4Q9UJ04 414 aa10.74□□□□□ -0.69
LIG4-204ENST00000611712 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
LIG4-204ENST00000611712 TRAK2O60296 914 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 SEC24BO95487 1268 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 KCNJ4P48050 445 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
LIG4-204ENST00000611712 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
LIG4-204ENST00000611712 RILPL2Q969X0 211 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 NUDT16Q96DE0 195 aaKnown RBP10.73□□□□□ -0.69
LIG4-204ENST00000611712 ALDH1L2Q3SY69 923 aa10.73□□□□□ -0.69
LIG4-204ENST00000611712 DCTN1Q14203 1278 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 PUS7Q96PZ0 661 aaKnown RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 PTPRTO14522 1441 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 KIAA1211Q6ZU35 1233 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 TRMT2AQ8IZ69 625 aaKnown RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 REC8O95072 547 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
LIG4-204ENST00000611712 TRPM1Q7Z4N2 1603 aa10.72□□□□□ -0.69
LIG4-204ENST00000611712 GLIPR1L2Q4G1C9 344 aa10.71□□□□□ -0.69
LIG4-204ENST00000611712 MCM4P33991 863 aa10.71□□□□□ -0.69
LIG4-204ENST00000611712 ERCC6L2Q5T890 1561 aa10.71□□□□□ -0.7
LIG4-204ENST00000611712 ABCC1P33527 1531 aa10.71□□□□□ -0.7
LIG4-204ENST00000611712 IL16Q14005 1332 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
LIG4-204ENST00000611712 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 ERVK-7P63135 1459 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 A0A1W2PP64 1363 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 TRPM2O94759 1503 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 NUTM2GQ5VZR2 741 aa10.7□□□□□ -0.7
LIG4-204ENST00000611712 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
LIG4-204ENST00000611712 UGGT1Q9NYU2 1555 aa10.69□□□□□ -0.7
LIG4-204ENST00000611712 HDAC1Q13547 482 aaPredicted RBP10.69□□□□□ -0.7
LIG4-204ENST00000611712 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
LIG4-204ENST00000611712 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
LIG4-204ENST00000611712 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
LIG4-204ENST00000611712 EIF2S2P20042 333 aaKnown RBP10.69□□□□□ -0.7
LIG4-204ENST00000611712 CFAP65Q6ZU64 1925 aaKnown RBP10.69□□□□□ -0.7
LIG4-204ENST00000611712 NLRP6P59044 892 aa10.69□□□□□ -0.7
LIG4-204ENST00000611712 CDC42BPBQ9Y5S2 1711 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 PLXNC1O60486 1568 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
LIG4-204ENST00000611712 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
LIG4-204ENST00000611712 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
LIG4-204ENST00000611712 MCM10Q7L590 875 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 ANO2Q9NQ90 1003 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 POLKQ9UBT6 870 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 NPATQ14207 1427 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 UNC13BO14795 1591 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 SYNMO15061 1565 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 FAM83GA6ND36 823 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 MRE11P49959 708 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 FOXD4L6Q3SYB3 417 aaPredicted RBP10.67□□□□□ -0.7
LIG4-204ENST00000611712 FOXD4L3Q6VB84 417 aaPredicted RBP10.67□□□□□ -0.7
LIG4-204ENST00000611712 MBIPQ9NS73 344 aa10.67□□□□□ -0.7
LIG4-204ENST00000611712 NUCB2P80303 420 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 CHD1O14646 1710 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 POLR1AO95602 1720 aaPredicted RBP10.66□□□□□ -0.7
LIG4-204ENST00000611712 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
LIG4-204ENST00000611712 K7ELQ4 463 aaPredicted RBP10.66□□□□□ -0.7
LIG4-204ENST00000611712 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 MIS18AQ9NYP9 233 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 TEFQ10587 303 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
LIG4-204ENST00000611712 RABEP1Q15276 862 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 PHACTR3Q96KR7 559 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 FGD1P98174 961 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 NUCB1Q02818 461 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
LIG4-204ENST00000611712 ZBTB40Q9NUA8 1239 aa10.65□□□□□ -0.71
LIG4-204ENST00000611712 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
LIG4-204ENST00000611712 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
LIG4-204ENST00000611712 RPAP2Q8IXW5 612 aaPredicted RBP10.64□□□□□ -0.71
LIG4-204ENST00000611712 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
LIG4-204ENST00000611712 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
LIG4-204ENST00000611712 SYAP1Q96A49 352 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms