RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 NRAPQ86VF7 1730 aa25.57■■□□□ 1.68
CHMP4A-211ENST00000609024 FAM182BQ5T319 152 aa25.56■■□□□ 1.68
CHMP4A-211ENST00000609024 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
CHMP4A-211ENST00000609024 SPATA31A5Q5VU36 1347 aa25.55■■□□□ 1.68
CHMP4A-211ENST00000609024 SPATA31A7Q8IWB4 1347 aa25.55■■□□□ 1.68
CHMP4A-211ENST00000609024 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
CHMP4A-211ENST00000609024 TRPM3Q9HCF6 1732 aaPredicted RBP25.54■■□□□ 1.68
CHMP4A-211ENST00000609024 WASLO00401 505 aaPredicted RBP25.52■■□□□ 1.68
CHMP4A-211ENST00000609024 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
CHMP4A-211ENST00000609024 TULP4Q9NRJ4 1543 aa25.51■■□□□ 1.67
CHMP4A-211ENST00000609024 ALS2Q96Q42 1657 aa25.51■■□□□ 1.67
CHMP4A-211ENST00000609024 PRR36Q9H6K5 1346 aa25.49■■□□□ 1.67
CHMP4A-211ENST00000609024 STRN4Q9NRL3 753 aa25.49■■□□□ 1.67
CHMP4A-211ENST00000609024 FAM196AQ6ZSG2 479 aa25.48■■□□□ 1.67
CHMP4A-211ENST00000609024 EZH2Q15910 746 aaKnown RBP25.47■■□□□ 1.67
CHMP4A-211ENST00000609024 DCAF11Q8TEB1 546 aa25.47■■□□□ 1.67
CHMP4A-211ENST00000609024 TRIM37O94972 964 aa25.46■■□□□ 1.67
CHMP4A-211ENST00000609024 EVA1CP58658 441 aa25.46■■□□□ 1.67
CHMP4A-211ENST00000609024 ADGRB1O14514 1584 aa25.46■■□□□ 1.67
CHMP4A-211ENST00000609024 SPATA31A1Q5TZJ5 1347 aa25.45■■□□□ 1.66
CHMP4A-211ENST00000609024 DISP2A7MBM2 1401 aa25.45■■□□□ 1.66
CHMP4A-211ENST00000609024 KIAA0232Q92628 1395 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 APBA3O96018 575 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 PDE3BQ13370 1112 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 CHRNA2Q15822 529 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 USP35Q9P2H5 1018 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 THSD7AQ9UPZ6 1657 aa25.44■■□□□ 1.66
CHMP4A-211ENST00000609024 ZC3H6P61129 1189 aaKnown RBP25.42■■□□□ 1.66
CHMP4A-211ENST00000609024 STAC3Q96MF2 364 aa25.42■■□□□ 1.66
CHMP4A-211ENST00000609024 ITSN1Q15811 1721 aa25.41■■□□□ 1.66
CHMP4A-211ENST00000609024 NUDT16Q96DE0 195 aaKnown RBP25.41■■□□□ 1.66
CHMP4A-211ENST00000609024 TNS1Q9HBL0 1735 aaKnown RBP25.4■■□□□ 1.66
CHMP4A-211ENST00000609024 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
CHMP4A-211ENST00000609024 NBPF8Q3BBV2 869 aa25.39■■□□□ 1.66
CHMP4A-211ENST00000609024 NBPF14Q5TI25 921 aa25.39■■□□□ 1.66
CHMP4A-211ENST00000609024 NUTM2GQ5VZR2 741 aa25.39■■□□□ 1.66
CHMP4A-211ENST00000609024 CAMKK2Q96RR4 588 aa25.39■■□□□ 1.66
CHMP4A-211ENST00000609024 CRYBG1Q9Y4K1 1723 aa25.39■■□□□ 1.65
CHMP4A-211ENST00000609024 ATP7BP35670 1465 aa25.38■■□□□ 1.65
CHMP4A-211ENST00000609024 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
CHMP4A-211ENST00000609024 BARGINQ6ZT62 677 aa25.34■■□□□ 1.65
CHMP4A-211ENST00000609024 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
CHMP4A-211ENST00000609024 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
CHMP4A-211ENST00000609024 DCAF8L1A6NGE4 600 aa25.33■■□□□ 1.65
CHMP4A-211ENST00000609024 ABTB2Q8N961 1025 aa25.33■■□□□ 1.65
CHMP4A-211ENST00000609024 SSH2Q76I76 1423 aa25.31■■□□□ 1.64
CHMP4A-211ENST00000609024 TCP11L2Q8N4U5 519 aa25.31■■□□□ 1.64
CHMP4A-211ENST00000609024 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
CHMP4A-211ENST00000609024 ACEP12821 1306 aa25.31■■□□□ 1.64
CHMP4A-211ENST00000609024 CCDC61Q9Y6R9 512 aa25.3■■□□□ 1.64
CHMP4A-211ENST00000609024 ARHGEF28Q8N1W1 1705 aaKnown RBP25.29■■□□□ 1.64
CHMP4A-211ENST00000609024 LARP1Q6PKG0 1096 aaKnown RBP25.29■■□□□ 1.64
CHMP4A-211ENST00000609024 C11orf95C9JLR9 678 aaPredicted RBP25.27■■□□□ 1.64
CHMP4A-211ENST00000609024 YY1P25490 414 aa25.27■■□□□ 1.64
CHMP4A-211ENST00000609024 THRAP3Q9Y2W1 955 aaKnown RBP25.27■■□□□ 1.64
CHMP4A-211ENST00000609024 NLRP13Q86W25 1043 aa25.26■■□□□ 1.63
CHMP4A-211ENST00000609024 POLR3AO14802 1390 aaPredicted RBP25.26■■□□□ 1.63
CHMP4A-211ENST00000609024 SPON1Q9HCB6 807 aa25.25■■□□□ 1.63
CHMP4A-211ENST00000609024 ZBTB7CA1YPR0 619 aa25.24■■□□□ 1.63
CHMP4A-211ENST00000609024 PLEKHG3A1L390 1219 aa25.23■■□□□ 1.63
CHMP4A-211ENST00000609024 CPDO75976 1380 aa25.22■■□□□ 1.63
CHMP4A-211ENST00000609024 SRPK2P78362 688 aaKnown RBP25.22■■□□□ 1.63
CHMP4A-211ENST00000609024 RREB1Q92766 1687 aa25.22■■□□□ 1.63
CHMP4A-211ENST00000609024 CAMTA1Q9Y6Y1 1673 aa25.22■■□□□ 1.63
CHMP4A-211ENST00000609024 NRKQ7Z2Y5 1582 aa25.22■■□□□ 1.63
CHMP4A-211ENST00000609024 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.63
CHMP4A-211ENST00000609024 KCNQ2O43526 872 aa25.19■■□□□ 1.62
CHMP4A-211ENST00000609024 GCP02774 474 aa25.19■■□□□ 1.62
CHMP4A-211ENST00000609024 TOPAZ1Q8N9V7 1692 aa25.19■■□□□ 1.62
CHMP4A-211ENST00000609024 USP19O94966 1318 aa25.17■■□□□ 1.62
CHMP4A-211ENST00000609024 PPIP5K1Q6PFW1 1433 aa25.16■■□□□ 1.62
CHMP4A-211ENST00000609024 OVOS2A0A0G2JMS6 1433 aa25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 OVOS2A0A0J9YW53 1432 aa25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 CRB1P82279 1406 aa25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 OVOS2Q6IE36 1432 aa25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 LMO7Q8WWI1 1683 aa25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 COL5A2P05997 1499 aaPredicted RBP25.15■■□□□ 1.62
CHMP4A-211ENST00000609024 DDB1Q16531 1140 aa25.14■■□□□ 1.62
CHMP4A-211ENST00000609024 PARP4Q9UKK3 1724 aaKnown RBP25.13■■□□□ 1.61
CHMP4A-211ENST00000609024 NLRP6P59044 892 aa25.13■■□□□ 1.61
CHMP4A-211ENST00000609024 TOM1L2Q6ZVM7 507 aa25.13■■□□□ 1.61
CHMP4A-211ENST00000609024 NINLQ9Y2I6 1382 aa25.13■■□□□ 1.61
CHMP4A-211ENST00000609024 BRD4O60885 1362 aaPredicted RBP25.12■■□□□ 1.61
CHMP4A-211ENST00000609024 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
CHMP4A-211ENST00000609024 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
CHMP4A-211ENST00000609024 KIAA1210Q9ULL0 1709 aa25.09■■□□□ 1.61
CHMP4A-211ENST00000609024 PLSCR1O15162 318 aa25.09■■□□□ 1.61
CHMP4A-211ENST00000609024 BCL11BQ9C0K0 894 aaPredicted RBP25.09■■□□□ 1.61
CHMP4A-211ENST00000609024 NBPF1Q3BBV0 1214 aa25.07■■□□□ 1.6
CHMP4A-211ENST00000609024 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
CHMP4A-211ENST00000609024 CDCA7Q9BWT1 371 aaPredicted RBP25.06■■□□□ 1.6
CHMP4A-211ENST00000609024 CABP1Q9NZU7 370 aa25.06■■□□□ 1.6
CHMP4A-211ENST00000609024 CSB-PGBD3P0DP91 1061 aa25.04■■□□□ 1.6
CHMP4A-211ENST00000609024 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
CHMP4A-211ENST00000609024 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
CHMP4A-211ENST00000609024 USP6P35125 1406 aa25.03■■□□□ 1.6
CHMP4A-211ENST00000609024 LRRC37A3O60309 1634 aa25.01■■□□□ 1.59
CHMP4A-211ENST00000609024 WDR17Q8IZU2 1322 aa25.01■■□□□ 1.59
CHMP4A-211ENST00000609024 PEAK1Q9H792 1746 aa25■■□□□ 1.59
CHMP4A-211ENST00000609024 STK32BQ9NY57 414 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 947 ms