RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 AMOTL2Q9Y2J4 779 aa6.94□□□□□ -1.3
SSX9-202ENST00000608568 JCADQ9P266 1359 aa6.94□□□□□ -1.3
SSX9-202ENST00000608568 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 C1orf167Q5SNV9 1468 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 C11orf95C9JLR9 678 aaPredicted RBP6.93□□□□□ -1.3
SSX9-202ENST00000608568 PRKAR2AP13861 404 aaKnown RBP6.93□□□□□ -1.3
SSX9-202ENST00000608568 GLIPR1L2Q4G1C9 344 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 BRINP3Q76B58 766 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
SSX9-202ENST00000608568 TOPAZ1Q8N9V7 1692 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 ALS2Q96Q42 1657 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 ITSN1Q15811 1721 aa6.93□□□□□ -1.3
SSX9-202ENST00000608568 PXDNQ92626 1479 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 CCER2I3L3R5 266 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 GABBR2O75899 941 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 GSE1Q14687 1217 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 NKX1-1Q15270 411 aaPredicted RBP6.92□□□□□ -1.3
SSX9-202ENST00000608568 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
SSX9-202ENST00000608568 USP35Q9P2H5 1018 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 PNPLA6Q8IY17 1366 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 PIK3C2GO75747 1445 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 SETD5Q9C0A6 1442 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 NRXN1Q9ULB1 1477 aa6.92□□□□□ -1.3
SSX9-202ENST00000608568 ADGRB1O14514 1584 aa6.91□□□□□ -1.3
SSX9-202ENST00000608568 ADGRB2O60241 1585 aa6.91□□□□□ -1.3
SSX9-202ENST00000608568 ADGRF5Q8IZF2 1346 aa6.91□□□□□ -1.3
SSX9-202ENST00000608568 PLEKHH1Q9ULM0 1364 aa6.91□□□□□ -1.3
SSX9-202ENST00000608568 TECPR2O15040 1411 aa6.91□□□□□ -1.3
SSX9-202ENST00000608568 NWD2Q9ULI1 1742 aa6.9□□□□□ -1.3
SSX9-202ENST00000608568 RTL5Q5HYW3 569 aaPredicted RBP6.9□□□□□ -1.3
SSX9-202ENST00000608568 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
SSX9-202ENST00000608568 RGS12O14924 1447 aa6.9□□□□□ -1.31
SSX9-202ENST00000608568 MYOM2P54296 1465 aa6.9□□□□□ -1.31
SSX9-202ENST00000608568 PHRF1Q9P1Y6 1649 aaKnown RBP6.9□□□□□ -1.31
SSX9-202ENST00000608568 RNF25Q96BH1 459 aaPredicted RBP6.89□□□□□ -1.31
SSX9-202ENST00000608568 C19orf44Q9H6X5 657 aa6.89□□□□□ -1.31
SSX9-202ENST00000608568 SALL2Q9Y467 1007 aaPredicted RBP6.89□□□□□ -1.31
SSX9-202ENST00000608568 CCDC144AA2RUR9 1427 aa6.89□□□□□ -1.31
SSX9-202ENST00000608568 GLI3P10071 1580 aa6.89□□□□□ -1.31
SSX9-202ENST00000608568 KIAA1210Q9ULL0 1709 aa6.89□□□□□ -1.31
SSX9-202ENST00000608568 WNK3Q9BYP7 1800 aa6.88□□□□□ -1.31
SSX9-202ENST00000608568 QRICH2Q9H0J4 1663 aa6.88□□□□□ -1.31
SSX9-202ENST00000608568 ATF3P18847 181 aa6.88□□□□□ -1.31
SSX9-202ENST00000608568 CADPS2Q86UW7 1296 aa6.88□□□□□ -1.31
SSX9-202ENST00000608568 PKNOX2Q96KN3 472 aa6.88□□□□□ -1.31
SSX9-202ENST00000608568 NOP58Q9Y2X3 529 aaKnown RBP6.88□□□□□ -1.31
SSX9-202ENST00000608568 RGPD5Q99666 1765 aa6.87□□□□□ -1.31
SSX9-202ENST00000608568 RAB3GAP2Q9H2M9 1393 aa6.87□□□□□ -1.31
SSX9-202ENST00000608568 RIOK3O14730 519 aaKnown RBP6.87□□□□□ -1.31
SSX9-202ENST00000608568 HDGFP51858 240 aaKnown RBP6.87□□□□□ -1.31
SSX9-202ENST00000608568 SPDYE1Q8NFV5 336 aaPredicted RBP6.87□□□□□ -1.31
SSX9-202ENST00000608568 ORAI2Q96SN7 254 aa6.87□□□□□ -1.31
SSX9-202ENST00000608568 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
SSX9-202ENST00000608568 DLC1Q96QB1 1528 aa6.86□□□□□ -1.31
SSX9-202ENST00000608568 YTHDC2Q9H6S0 1430 aaKnown RBP6.86□□□□□ -1.31
SSX9-202ENST00000608568 SPATA31A6Q5VVP1 1343 aa6.86□□□□□ -1.31
SSX9-202ENST00000608568 NUTM2BA6NNL0 878 aaPredicted RBP6.86□□□□□ -1.31
SSX9-202ENST00000608568 NUTM2EB1AL46 878 aaPredicted RBP6.86□□□□□ -1.31
SSX9-202ENST00000608568 NUTM2AQ8IVF1 878 aaPredicted RBP6.86□□□□□ -1.31
SSX9-202ENST00000608568 TNS1Q9HBL0 1735 aaKnown RBP6.86□□□□□ -1.31
SSX9-202ENST00000608568 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
SSX9-202ENST00000608568 AKAP12Q02952 1782 aa6.85□□□□□ -1.31
SSX9-202ENST00000608568 LRPPRCP42704 1394 aaKnown RBP6.85□□□□□ -1.31
SSX9-202ENST00000608568 AFF2P51816 1311 aa6.85□□□□□ -1.31
SSX9-202ENST00000608568 MPHOSPH9Q99550 1183 aa6.85□□□□□ -1.31
SSX9-202ENST00000608568 RYDENQ9NUL5 291 aaKnown RBP6.85□□□□□ -1.31
SSX9-202ENST00000608568 CLEC11AQ9Y240 323 aa6.85□□□□□ -1.31
SSX9-202ENST00000608568 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
SSX9-202ENST00000608568 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
SSX9-202ENST00000608568 WASHC2AQ641Q2 1341 aa6.84□□□□□ -1.31
SSX9-202ENST00000608568 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
SSX9-202ENST00000608568 RGL3Q3MIN7 710 aa6.84□□□□□ -1.31
SSX9-202ENST00000608568 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
SSX9-202ENST00000608568 TMEM132EQ6IEE7 984 aa6.84□□□□□ -1.31
SSX9-202ENST00000608568 WAPLQ7Z5K2 1190 aa6.84□□□□□ -1.31
SSX9-202ENST00000608568 ATRNO75882 1429 aa6.84□□□□□ -1.32
SSX9-202ENST00000608568 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 RPGRIP1LQ68CZ1 1315 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 NUTM2FA1L443 756 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 STK25O00506 426 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 DCAF8Q5TAQ9 597 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 CCDC136Q96JN2 1154 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 STK26Q9P289 416 aa6.83□□□□□ -1.32
SSX9-202ENST00000608568 DHX57Q6P158 1386 aaKnown RBP6.82□□□□□ -1.32
SSX9-202ENST00000608568 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
SSX9-202ENST00000608568 COL14A1Q05707 1796 aaKnown RBP6.82□□□□□ -1.32
SSX9-202ENST00000608568 TULP4Q9NRJ4 1543 aa6.82□□□□□ -1.32
SSX9-202ENST00000608568 VGFO15240 615 aaPredicted RBP6.82□□□□□ -1.32
SSX9-202ENST00000608568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.82□□□□□ -1.32
SSX9-202ENST00000608568 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
SSX9-202ENST00000608568 NRKQ7Z2Y5 1582 aa6.82□□□□□ -1.32
SSX9-202ENST00000608568 ABCC11Q96J66 1382 aa6.82□□□□□ -1.32
SSX9-202ENST00000608568 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 ATP7BP35670 1465 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 BCL9LQ86UU0 1499 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 ADAMTS2O95450 1211 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 NUBP1P53384 320 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 SGIP1Q9BQI5 828 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms