RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TOPAZ1Q8N9V7 1692 aa19.22■□□□□ 0.67
CTSA-213ENST00000606782 CENPJQ9HC77 1338 aaPredicted RBP19.22■□□□□ 0.67
CTSA-213ENST00000606782 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
CTSA-213ENST00000606782 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
CTSA-213ENST00000606782 ACEP12821 1306 aa19.2■□□□□ 0.66
CTSA-213ENST00000606782 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
CTSA-213ENST00000606782 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
CTSA-213ENST00000606782 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
CTSA-213ENST00000606782 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
CTSA-213ENST00000606782 COL14A1Q05707 1796 aaKnown RBP19.17■□□□□ 0.66
CTSA-213ENST00000606782 TRPM1Q7Z4N2 1603 aa19.16■□□□□ 0.66
CTSA-213ENST00000606782 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
CTSA-213ENST00000606782 NRAPQ86VF7 1730 aa19.16■□□□□ 0.66
CTSA-213ENST00000606782 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
CTSA-213ENST00000606782 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
CTSA-213ENST00000606782 BRD4O60885 1362 aaPredicted RBP19.15■□□□□ 0.66
CTSA-213ENST00000606782 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
CTSA-213ENST00000606782 PPIP5K1Q6PFW1 1433 aa19.13■□□□□ 0.65
CTSA-213ENST00000606782 QRICH2Q9H0J4 1663 aa19.13■□□□□ 0.65
CTSA-213ENST00000606782 EP400Q96L91 3159 aa19.12■□□□□ 0.65
CTSA-213ENST00000606782 BRWD3Q6RI45 1802 aa19.12■□□□□ 0.65
CTSA-213ENST00000606782 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
CTSA-213ENST00000606782 PRDM11Q9NQV5 511 aa19.12■□□□□ 0.65
CTSA-213ENST00000606782 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
CTSA-213ENST00000606782 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
CTSA-213ENST00000606782 KIAA0232Q92628 1395 aa19.1■□□□□ 0.65
CTSA-213ENST00000606782 USP19O94966 1318 aa19.1■□□□□ 0.65
CTSA-213ENST00000606782 SPATA31A5Q5VU36 1347 aa19.1■□□□□ 0.65
CTSA-213ENST00000606782 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
CTSA-213ENST00000606782 SPATA31A7Q8IWB4 1347 aa19.1■□□□□ 0.65
CTSA-213ENST00000606782 PHRF1Q9P1Y6 1649 aaKnown RBP19.1■□□□□ 0.65
CTSA-213ENST00000606782 ABTB2Q8N961 1025 aa19.09■□□□□ 0.65
CTSA-213ENST00000606782 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
CTSA-213ENST00000606782 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
CTSA-213ENST00000606782 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
CTSA-213ENST00000606782 CABP1Q9NZU7 370 aa19.08■□□□□ 0.64
CTSA-213ENST00000606782 CPDO75976 1380 aa19.07■□□□□ 0.64
CTSA-213ENST00000606782 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
CTSA-213ENST00000606782 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
CTSA-213ENST00000606782 ZC3H6P61129 1189 aaKnown RBP19.06■□□□□ 0.64
CTSA-213ENST00000606782 FAM98CQ17RN3 349 aaKnown RBP19.06■□□□□ 0.64
CTSA-213ENST00000606782 USP6P35125 1406 aa19.06■□□□□ 0.64
CTSA-213ENST00000606782 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
CTSA-213ENST00000606782 SBNO2Q9Y2G9 1366 aa19.05■□□□□ 0.64
CTSA-213ENST00000606782 SPATA31A1Q5TZJ5 1347 aa19.04■□□□□ 0.64
CTSA-213ENST00000606782 GCP02774 474 aa19.04■□□□□ 0.64
CTSA-213ENST00000606782 NRKQ7Z2Y5 1582 aa19.04■□□□□ 0.64
CTSA-213ENST00000606782 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
CTSA-213ENST00000606782 THSD7AQ9UPZ6 1657 aa19.02■□□□□ 0.64
CTSA-213ENST00000606782 LMO7Q8WWI1 1683 aa19.01■□□□□ 0.63
CTSA-213ENST00000606782 CAMTA1Q9Y6Y1 1673 aa19.01■□□□□ 0.63
CTSA-213ENST00000606782 SLIT3O75094 1523 aa19■□□□□ 0.63
CTSA-213ENST00000606782 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 NLRP6P59044 892 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 BARGINQ6ZT62 677 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 CARD11Q9BXL7 1154 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
CTSA-213ENST00000606782 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
CTSA-213ENST00000606782 A0A0G2JS52 829 aa18.98■□□□□ 0.63
CTSA-213ENST00000606782 MYT1Q01538 1121 aa18.98■□□□□ 0.63
CTSA-213ENST00000606782 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
CTSA-213ENST00000606782 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
CTSA-213ENST00000606782 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
CTSA-213ENST00000606782 EVA1CP58658 441 aa18.97■□□□□ 0.63
CTSA-213ENST00000606782 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
CTSA-213ENST00000606782 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
CTSA-213ENST00000606782 TTC21AQ8NDW8 1320 aa18.96■□□□□ 0.63
CTSA-213ENST00000606782 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
CTSA-213ENST00000606782 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
CTSA-213ENST00000606782 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
CTSA-213ENST00000606782 LARP1Q6PKG0 1096 aaKnown RBP18.95■□□□□ 0.62
CTSA-213ENST00000606782 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
CTSA-213ENST00000606782 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
CTSA-213ENST00000606782 TCP11L2Q8N4U5 519 aa18.94■□□□□ 0.62
CTSA-213ENST00000606782 COL5A2P05997 1499 aaPredicted RBP18.94■□□□□ 0.62
CTSA-213ENST00000606782 DISP2A7MBM2 1401 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 COL18A1P39060 1754 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 BAG6P46379 1132 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 FAM182BQ5T319 152 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 FAM196AQ6ZSG2 479 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
CTSA-213ENST00000606782 KTN1Q86UP2 1357 aaKnown RBP18.91■□□□□ 0.62
CTSA-213ENST00000606782 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
CTSA-213ENST00000606782 CRB1P82279 1406 aa18.9■□□□□ 0.62
CTSA-213ENST00000606782 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
CTSA-213ENST00000606782 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
CTSA-213ENST00000606782 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
CTSA-213ENST00000606782 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
CTSA-213ENST00000606782 TESK2Q96S53 571 aa18.88■□□□□ 0.61
CTSA-213ENST00000606782 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
CTSA-213ENST00000606782 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
CTSA-213ENST00000606782 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
CTSA-213ENST00000606782 NFAT5O94916 1531 aa18.86■□□□□ 0.61
CTSA-213ENST00000606782 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
CTSA-213ENST00000606782 USP54Q70EL1 1684 aa18.85■□□□□ 0.61
CTSA-213ENST00000606782 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
CTSA-213ENST00000606782 WDR17Q8IZU2 1322 aa18.85■□□□□ 0.61
CTSA-213ENST00000606782 TNS1Q9HBL0 1735 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms