RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SIAH2O43255 324 aa6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 VARSP26640 1264 aaKnown RBP6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 NNTQ13423 1086 aa6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 GIGYF2Q6Y7W6 1299 aaKnown RBP6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 TSC1Q92574 1164 aa6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 BEGAINQ9BUH8 593 aa6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 EVA1BQ9NVM1 165 aa6.36□□□□□ -1.39
HMGB1P50-201ENST00000605814 ARID5BQ14865 1188 aa6.35□□□□□ -1.39
HMGB1P50-201ENST00000605814 FAM174AQ8TBP5 190 aa6.35□□□□□ -1.39
HMGB1P50-201ENST00000605814 VEGFBP49765 207 aa6.34□□□□□ -1.39
HMGB1P50-201ENST00000605814 WDR4P57081 412 aaKnown RBP6.34□□□□□ -1.39
HMGB1P50-201ENST00000605814 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.39
HMGB1P50-201ENST00000605814 MYO15BQ96JP2 1530 aa6.34□□□□□ -1.39
HMGB1P50-201ENST00000605814 ACIN1Q9UKV3 1341 aaKnown RBP6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 ADH1CP00326 375 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 AMHR2Q16671 573 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 DESI1Q6ICB0 168 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 NPAS3Q8IXF0 933 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 TBC1D2Q9BYX2 928 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZBTB3Q9H5J0 574 aa6.33□□□□□ -1.4
HMGB1P50-201ENST00000605814 UPP2O95045 317 aa6.32□□□□□ -1.4
HMGB1P50-201ENST00000605814 CSPP1Q1MSJ5 1256 aa6.32□□□□□ -1.4
HMGB1P50-201ENST00000605814 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
HMGB1P50-201ENST00000605814 BARGINQ6ZT62 677 aa6.32□□□□□ -1.4
HMGB1P50-201ENST00000605814 PURBQ96QR8 312 aaKnown RBP6.32□□□□□ -1.4
HMGB1P50-201ENST00000605814 NUTM2BA6NNL0 878 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 NUTM2EB1AL46 878 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 GMPRP36959 345 aa6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 NUTM2DQ5VT03 806 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 NUTM2AQ8IVF1 878 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZMYND10O75800 440 aa6.3□□□□□ -1.4
HMGB1P50-201ENST00000605814 RSBN1LQ6PCB5 846 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P50-201ENST00000605814 MAN1A2O60476 641 aa6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 GJA5P36382 358 aa6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 C6orf118Q5T5N4 469 aa6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 LYPD8Q6UX82 237 aa6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZC3H15Q8WU90 426 aaKnown RBP6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 MAP10Q9P2G4 905 aa6.29□□□□□ -1.4
HMGB1P50-201ENST00000605814 H3BM21 787 aa6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 ZIC2O95409 532 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 TIMP2P16035 220 aa6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 RIC3Q7Z5B4 369 aa6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 BPHLQ86WA6 291 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 MPNDQ8N594 471 aa6.28□□□□□ -1.4
HMGB1P50-201ENST00000605814 CFAP99D6REC4 459 aa6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 BMP2P12643 396 aa6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 PARP9Q8IXQ6 854 aa6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 ARMC2Q8NEN0 867 aa6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 FOXJ1Q92949 421 aa6.27□□□□□ -1.41
HMGB1P50-201ENST00000605814 SOBPA7XYQ1 873 aa6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 SPTLC1O15269 473 aa6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 NR5A1Q13285 461 aa6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 NBPF14Q5TI25 921 aa6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 PRPF38BQ5VTL8 546 aaKnown RBP6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 PCDHB15Q9Y5E8 787 aa6.26□□□□□ -1.41
HMGB1P50-201ENST00000605814 MAGEB6P1A0A0J9YX57 407 aa6.25□□□□□ -1.41
HMGB1P50-201ENST00000605814 CABLES1Q8TDN4 633 aa6.25□□□□□ -1.41
HMGB1P50-201ENST00000605814 AK7Q96M32 723 aa6.25□□□□□ -1.41
HMGB1P50-201ENST00000605814 ZFAND3Q9H8U3 227 aa6.25□□□□□ -1.41
HMGB1P50-201ENST00000605814 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P50-201ENST00000605814 CENPBP07199 599 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P50-201ENST00000605814 FSHRP23945 695 aa6.24□□□□□ -1.41
HMGB1P50-201ENST00000605814 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P50-201ENST00000605814 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
HMGB1P50-201ENST00000605814 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
HMGB1P50-201ENST00000605814 TRIM66O15016 1216 aa6.23□□□□□ -1.41
HMGB1P50-201ENST00000605814 F12P00748 615 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P50-201ENST00000605814 LINC00528Q8N1L1 170 aa6.23□□□□□ -1.41
HMGB1P50-201ENST00000605814 CDK15Q96Q40 435 aa6.23□□□□□ -1.41
HMGB1P50-201ENST00000605814 CARD14Q9BXL6 1004 aa6.23□□□□□ -1.41
HMGB1P50-201ENST00000605814 PER1O15534 1290 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P50-201ENST00000605814 NEUROD1Q13562 356 aa6.21□□□□□ -1.42
HMGB1P50-201ENST00000605814 SUPT5HO00267 1087 aaKnown RBP6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 NR3C2P08235 984 aa6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 QPCTQ16769 361 aa6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 MYSM1Q5VVJ2 828 aa6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 MEIOBQ8N635 442 aa6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 TSEN34Q9BSV6 310 aaKnown RBP6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 EMILIN1Q9Y6C2 1016 aa6.2□□□□□ -1.42
HMGB1P50-201ENST00000605814 PDE4DQ08499 809 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 C4orf48Q5BLP8 95 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 CCDC116Q8IYX3 515 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 KLF16Q9BXK1 252 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 PGPEP1Q9NXJ5 209 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 LIMD1Q9UGP4 676 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
HMGB1P50-201ENST00000605814 CLK2P49760 499 aaKnown RBP6.18□□□□□ -1.42
HMGB1P50-201ENST00000605814 SLC10A4Q96EP9 437 aa6.18□□□□□ -1.42
HMGB1P50-201ENST00000605814 RSPH6AQ9H0K4 717 aa6.18□□□□□ -1.42
HMGB1P50-201ENST00000605814 MAP4K5Q9Y4K4 846 aa6.18□□□□□ -1.42
HMGB1P50-201ENST00000605814 PPFIA3O75145 1194 aa6.17□□□□□ -1.42
HMGB1P50-201ENST00000605814 VSIG8P0DPA2 414 aa6.17□□□□□ -1.42
HMGB1P50-201ENST00000605814 GRM5P41594 1212 aa6.17□□□□□ -1.42
HMGB1P50-201ENST00000605814 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.17□□□□□ -1.42
HMGB1P50-201ENST00000605814 GPKOWQ92917 476 aaPredicted RBP eCLIP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms