RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 SIN3AQ96ST3 1273 aa17.3■□□□□ 0.36
AC078880.3-201ENST00000603439 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
AC078880.3-201ENST00000603439 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
AC078880.3-201ENST00000603439 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
AC078880.3-201ENST00000603439 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
AC078880.3-201ENST00000603439 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
AC078880.3-201ENST00000603439 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
AC078880.3-201ENST00000603439 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
AC078880.3-201ENST00000603439 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
AC078880.3-201ENST00000603439 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
AC078880.3-201ENST00000603439 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
AC078880.3-201ENST00000603439 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
AC078880.3-201ENST00000603439 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
AC078880.3-201ENST00000603439 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
AC078880.3-201ENST00000603439 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
AC078880.3-201ENST00000603439 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
AC078880.3-201ENST00000603439 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
AC078880.3-201ENST00000603439 ACEP12821 1306 aa17.21■□□□□ 0.35
AC078880.3-201ENST00000603439 LMO7Q8WWI1 1683 aa17.21■□□□□ 0.35
AC078880.3-201ENST00000603439 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
AC078880.3-201ENST00000603439 VPS72Q15906 364 aa17.2■□□□□ 0.34
AC078880.3-201ENST00000603439 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
AC078880.3-201ENST00000603439 MON2Q7Z3U7 1717 aa17.19■□□□□ 0.34
AC078880.3-201ENST00000603439 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
AC078880.3-201ENST00000603439 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
AC078880.3-201ENST00000603439 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
AC078880.3-201ENST00000603439 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
AC078880.3-201ENST00000603439 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
AC078880.3-201ENST00000603439 USP6P35125 1406 aa17.17■□□□□ 0.34
AC078880.3-201ENST00000603439 SLIT3O75094 1523 aa17.16■□□□□ 0.34
AC078880.3-201ENST00000603439 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
AC078880.3-201ENST00000603439 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
AC078880.3-201ENST00000603439 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
AC078880.3-201ENST00000603439 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
AC078880.3-201ENST00000603439 USP19O94966 1318 aa17.15■□□□□ 0.34
AC078880.3-201ENST00000603439 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
AC078880.3-201ENST00000603439 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
AC078880.3-201ENST00000603439 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
AC078880.3-201ENST00000603439 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
AC078880.3-201ENST00000603439 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
AC078880.3-201ENST00000603439 TNS1Q9HBL0 1735 aaKnown RBP17.12■□□□□ 0.33
AC078880.3-201ENST00000603439 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
AC078880.3-201ENST00000603439 CPDO75976 1380 aa17.11■□□□□ 0.33
AC078880.3-201ENST00000603439 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
AC078880.3-201ENST00000603439 CHRNA2Q15822 529 aa17.1■□□□□ 0.33
AC078880.3-201ENST00000603439 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
AC078880.3-201ENST00000603439 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
AC078880.3-201ENST00000603439 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
AC078880.3-201ENST00000603439 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
AC078880.3-201ENST00000603439 COL18A1P39060 1754 aa17.09■□□□□ 0.33
AC078880.3-201ENST00000603439 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 A0A0G2JS52 829 aa17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 MYT1Q01538 1121 aa17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
AC078880.3-201ENST00000603439 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
AC078880.3-201ENST00000603439 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
AC078880.3-201ENST00000603439 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
AC078880.3-201ENST00000603439 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
AC078880.3-201ENST00000603439 NFAT5O94916 1531 aa17.06■□□□□ 0.32
AC078880.3-201ENST00000603439 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
AC078880.3-201ENST00000603439 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
AC078880.3-201ENST00000603439 SPATA31A1Q5TZJ5 1347 aa17.05■□□□□ 0.32
AC078880.3-201ENST00000603439 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
AC078880.3-201ENST00000603439 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
AC078880.3-201ENST00000603439 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
AC078880.3-201ENST00000603439 LTN1O94822 1766 aa17.04■□□□□ 0.32
AC078880.3-201ENST00000603439 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
AC078880.3-201ENST00000603439 ABCC6O95255 1503 aa17.02■□□□□ 0.32
AC078880.3-201ENST00000603439 GCP02774 474 aa17.01■□□□□ 0.31
AC078880.3-201ENST00000603439 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
AC078880.3-201ENST00000603439 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
AC078880.3-201ENST00000603439 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 CRB1P82279 1406 aa16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 NLRP6P59044 892 aa16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 AATKQ6ZMQ8 1374 aa16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
AC078880.3-201ENST00000603439 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
AC078880.3-201ENST00000603439 RREB1Q92766 1687 aa16.97■□□□□ 0.31
AC078880.3-201ENST00000603439 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
AC078880.3-201ENST00000603439 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
AC078880.3-201ENST00000603439 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
AC078880.3-201ENST00000603439 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
AC078880.3-201ENST00000603439 DISP2A7MBM2 1401 aa16.96■□□□□ 0.31
AC078880.3-201ENST00000603439 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
AC078880.3-201ENST00000603439 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
AC078880.3-201ENST00000603439 MYOM1P52179 1685 aa16.96■□□□□ 0.31
AC078880.3-201ENST00000603439 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
AC078880.3-201ENST00000603439 EVA1CP58658 441 aa16.95■□□□□ 0.3
AC078880.3-201ENST00000603439 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
AC078880.3-201ENST00000603439 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
AC078880.3-201ENST00000603439 USP47Q96K76 1375 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms