RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ALS2Q96Q42 1657 aa19.3■□□□□ 0.68
RNF40-212ENST00000602784 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
RNF40-212ENST00000602784 C11orf95C9JLR9 678 aaPredicted RBP19.28■□□□□ 0.68
RNF40-212ENST00000602784 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
RNF40-212ENST00000602784 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
RNF40-212ENST00000602784 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
RNF40-212ENST00000602784 A0A1W2PP64 1363 aa19.27■□□□□ 0.68
RNF40-212ENST00000602784 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
RNF40-212ENST00000602784 MON2Q7Z3U7 1717 aa19.26■□□□□ 0.67
RNF40-212ENST00000602784 ABTB2Q8N961 1025 aa19.26■□□□□ 0.67
RNF40-212ENST00000602784 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
RNF40-212ENST00000602784 MED1Q15648 1581 aaPredicted RBP19.24■□□□□ 0.67
RNF40-212ENST00000602784 NUTM2BA6NNL0 878 aaPredicted RBP19.24■□□□□ 0.67
RNF40-212ENST00000602784 NUTM2EB1AL46 878 aaPredicted RBP19.24■□□□□ 0.67
RNF40-212ENST00000602784 NUTM2AQ8IVF1 878 aaPredicted RBP19.24■□□□□ 0.67
RNF40-212ENST00000602784 LRP6O75581 1613 aa19.24■□□□□ 0.67
RNF40-212ENST00000602784 MYOM1P52179 1685 aa19.24■□□□□ 0.67
RNF40-212ENST00000602784 NRKQ7Z2Y5 1582 aa19.23■□□□□ 0.67
RNF40-212ENST00000602784 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
RNF40-212ENST00000602784 KIF7Q2M1P5 1343 aa19.23■□□□□ 0.67
RNF40-212ENST00000602784 POLR3GLQ9BT43 218 aa19.21■□□□□ 0.67
RNF40-212ENST00000602784 CABLES1Q8TDN4 633 aa19.2■□□□□ 0.66
RNF40-212ENST00000602784 USP19O94966 1318 aa19.2■□□□□ 0.66
RNF40-212ENST00000602784 HAP1P54257 671 aaPredicted RBP19.19■□□□□ 0.66
RNF40-212ENST00000602784 NLRP6P59044 892 aa19.19■□□□□ 0.66
RNF40-212ENST00000602784 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
RNF40-212ENST00000602784 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
RNF40-212ENST00000602784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
RNF40-212ENST00000602784 PIK3C2AO00443 1686 aa19.19■□□□□ 0.66
RNF40-212ENST00000602784 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
RNF40-212ENST00000602784 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
RNF40-212ENST00000602784 CRYBG1Q9Y4K1 1723 aa19.18■□□□□ 0.66
RNF40-212ENST00000602784 ADAMTS2O95450 1211 aa19.18■□□□□ 0.66
RNF40-212ENST00000602784 CARD14Q9BXL6 1004 aa19.18■□□□□ 0.66
RNF40-212ENST00000602784 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
RNF40-212ENST00000602784 WASHC2AQ641Q2 1341 aa19.17■□□□□ 0.66
RNF40-212ENST00000602784 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
RNF40-212ENST00000602784 GCP02774 474 aa19.15■□□□□ 0.66
RNF40-212ENST00000602784 NME9Q86XW9 330 aa19.15■□□□□ 0.66
RNF40-212ENST00000602784 PANK3Q9H999 370 aa19.15■□□□□ 0.66
RNF40-212ENST00000602784 USP54Q70EL1 1684 aa19.14■□□□□ 0.66
RNF40-212ENST00000602784 NGLY1Q96IV0 654 aa19.14■□□□□ 0.65
RNF40-212ENST00000602784 SLIT3O75094 1523 aa19.14■□□□□ 0.65
RNF40-212ENST00000602784 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.65
RNF40-212ENST00000602784 FYB1O15117 783 aa19.13■□□□□ 0.65
RNF40-212ENST00000602784 PLEKHG5O94827 1062 aa19.13■□□□□ 0.65
RNF40-212ENST00000602784 FNBP4Q8N3X1 1017 aaPredicted RBP19.13■□□□□ 0.65
RNF40-212ENST00000602784 KCNH5Q8NCM2 988 aa19.13■□□□□ 0.65
RNF40-212ENST00000602784 C8orf37Q96NL8 207 aa19.13■□□□□ 0.65
RNF40-212ENST00000602784 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
RNF40-212ENST00000602784 NSD3Q9BZ95 1437 aa19.12■□□□□ 0.65
RNF40-212ENST00000602784 CPDO75976 1380 aa19.12■□□□□ 0.65
RNF40-212ENST00000602784 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
RNF40-212ENST00000602784 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
RNF40-212ENST00000602784 OVOS2A0A0J9YW53 1432 aa19.1■□□□□ 0.65
RNF40-212ENST00000602784 OVOS2Q6IE36 1432 aa19.1■□□□□ 0.65
RNF40-212ENST00000602784 AFF2P51816 1311 aa19.1■□□□□ 0.65
RNF40-212ENST00000602784 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
RNF40-212ENST00000602784 ZNF772Q68DY9 489 aaPredicted RBP19.1■□□□□ 0.65
RNF40-212ENST00000602784 COG3Q96JB2 828 aa19.1■□□□□ 0.65
RNF40-212ENST00000602784 RGS17Q9UGC6 210 aaPredicted RBP19.1■□□□□ 0.65
RNF40-212ENST00000602784 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
RNF40-212ENST00000602784 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
RNF40-212ENST00000602784 ZC3H6P61129 1189 aaKnown RBP19.08■□□□□ 0.64
RNF40-212ENST00000602784 SLIT2O94813 1529 aa19.08■□□□□ 0.64
RNF40-212ENST00000602784 COL14A1Q05707 1796 aaKnown RBP19.07■□□□□ 0.64
RNF40-212ENST00000602784 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
RNF40-212ENST00000602784 NFAT5O94916 1531 aa19.06■□□□□ 0.64
RNF40-212ENST00000602784 ARHGEF25Q86VW2 580 aa19.06■□□□□ 0.64
RNF40-212ENST00000602784 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
RNF40-212ENST00000602784 USP21Q9UK80 565 aa19.06■□□□□ 0.64
RNF40-212ENST00000602784 KIF20BQ96Q89 1820 aa19.05■□□□□ 0.64
RNF40-212ENST00000602784 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
RNF40-212ENST00000602784 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
RNF40-212ENST00000602784 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
RNF40-212ENST00000602784 NSD2O96028 1365 aa19.05■□□□□ 0.64
RNF40-212ENST00000602784 UNC5CLQ8IV45 518 aa19.04■□□□□ 0.64
RNF40-212ENST00000602784 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
RNF40-212ENST00000602784 CHRNA2Q15822 529 aa19.03■□□□□ 0.64
RNF40-212ENST00000602784 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.64
RNF40-212ENST00000602784 QTRT2Q9H974 415 aaKnown RBP19.02■□□□□ 0.64
RNF40-212ENST00000602784 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
RNF40-212ENST00000602784 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.02■□□□□ 0.63
RNF40-212ENST00000602784 SOX12O15370 315 aa19.01■□□□□ 0.63
RNF40-212ENST00000602784 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
RNF40-212ENST00000602784 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
RNF40-212ENST00000602784 TRPC5Q9UL62 973 aaPredicted RBP19.01■□□□□ 0.63
RNF40-212ENST00000602784 ABCC6O95255 1503 aa19■□□□□ 0.63
RNF40-212ENST00000602784 NPC1L1Q9UHC9 1359 aa19■□□□□ 0.63
RNF40-212ENST00000602784 LMO7Q8WWI1 1683 aa19■□□□□ 0.63
RNF40-212ENST00000602784 ATRNO75882 1429 aa19■□□□□ 0.63
RNF40-212ENST00000602784 COL18A1P39060 1754 aa18.98■□□□□ 0.63
RNF40-212ENST00000602784 CAMTA1Q9Y6Y1 1673 aa18.98■□□□□ 0.63
RNF40-212ENST00000602784 ANKRD26Q9UPS8 1709 aa18.98■□□□□ 0.63
RNF40-212ENST00000602784 VPS72Q15906 364 aa18.98■□□□□ 0.63
RNF40-212ENST00000602784 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
RNF40-212ENST00000602784 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
RNF40-212ENST00000602784 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
RNF40-212ENST00000602784 AXIN2Q9Y2T1 843 aa18.96■□□□□ 0.63
RNF40-212ENST00000602784 MAP3K19Q56UN5 1328 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms