RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
SFXN2-209ENST00000602670 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
SFXN2-209ENST00000602670 RREB1Q92766 1687 aa19.05■□□□□ 0.64
SFXN2-209ENST00000602670 TRIM37O94972 964 aa19.05■□□□□ 0.64
SFXN2-209ENST00000602670 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
SFXN2-209ENST00000602670 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
SFXN2-209ENST00000602670 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
SFXN2-209ENST00000602670 DLC1Q96QB1 1528 aa19.04■□□□□ 0.64
SFXN2-209ENST00000602670 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
SFXN2-209ENST00000602670 FAM196AQ6ZSG2 479 aa19.03■□□□□ 0.64
SFXN2-209ENST00000602670 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
SFXN2-209ENST00000602670 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.64
SFXN2-209ENST00000602670 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
SFXN2-209ENST00000602670 APBA3O96018 575 aa19.01■□□□□ 0.63
SFXN2-209ENST00000602670 PRDM11Q9NQV5 511 aa19.01■□□□□ 0.63
SFXN2-209ENST00000602670 POGKQ9P215 609 aa18.99■□□□□ 0.63
SFXN2-209ENST00000602670 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
SFXN2-209ENST00000602670 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
SFXN2-209ENST00000602670 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
SFXN2-209ENST00000602670 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
SFXN2-209ENST00000602670 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
SFXN2-209ENST00000602670 PHRF1Q9P1Y6 1649 aaKnown RBP18.96■□□□□ 0.63
SFXN2-209ENST00000602670 EIF3AQ14152 1382 aaKnown RBP18.96■□□□□ 0.63
SFXN2-209ENST00000602670 CHRNA2Q15822 529 aa18.95■□□□□ 0.62
SFXN2-209ENST00000602670 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
SFXN2-209ENST00000602670 PAK3O75914 559 aaPredicted RBP18.94■□□□□ 0.62
SFXN2-209ENST00000602670 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
SFXN2-209ENST00000602670 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SFXN2-209ENST00000602670 MINK1Q8N4C8 1332 aaPredicted RBP18.94■□□□□ 0.62
SFXN2-209ENST00000602670 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
SFXN2-209ENST00000602670 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
SFXN2-209ENST00000602670 SSH2Q76I76 1423 aa18.92■□□□□ 0.62
SFXN2-209ENST00000602670 BARGINQ6ZT62 677 aa18.92■□□□□ 0.62
SFXN2-209ENST00000602670 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
SFXN2-209ENST00000602670 SPON1Q9HCB6 807 aa18.92■□□□□ 0.62
SFXN2-209ENST00000602670 USP35Q9P2H5 1018 aa18.92■□□□□ 0.62
SFXN2-209ENST00000602670 UTRNP46939 3433 aa18.91■□□□□ 0.62
SFXN2-209ENST00000602670 WASLO00401 505 aaPredicted RBP18.91■□□□□ 0.62
SFXN2-209ENST00000602670 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
SFXN2-209ENST00000602670 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
SFXN2-209ENST00000602670 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
SFXN2-209ENST00000602670 KCNQ2O43526 872 aa18.9■□□□□ 0.62
SFXN2-209ENST00000602670 ATP7BP35670 1465 aa18.9■□□□□ 0.62
SFXN2-209ENST00000602670 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
SFXN2-209ENST00000602670 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
SFXN2-209ENST00000602670 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
SFXN2-209ENST00000602670 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
SFXN2-209ENST00000602670 LMO7Q8WWI1 1683 aa18.87■□□□□ 0.61
SFXN2-209ENST00000602670 LARP1Q6PKG0 1096 aaKnown RBP18.86■□□□□ 0.61
SFXN2-209ENST00000602670 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
SFXN2-209ENST00000602670 EVA1CP58658 441 aa18.85■□□□□ 0.61
SFXN2-209ENST00000602670 NUTM2GQ5VZR2 741 aa18.85■□□□□ 0.61
SFXN2-209ENST00000602670 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
SFXN2-209ENST00000602670 RGPD3A6NKT7 1758 aaPredicted RBP18.85■□□□□ 0.61
SFXN2-209ENST00000602670 RGPD4Q7Z3J3 1758 aa18.85■□□□□ 0.61
SFXN2-209ENST00000602670 CASZ1Q86V15 1759 aa18.85■□□□□ 0.61
SFXN2-209ENST00000602670 PEAK1Q9H792 1746 aa18.83■□□□□ 0.61
SFXN2-209ENST00000602670 NUDT16Q96DE0 195 aaKnown RBP18.82■□□□□ 0.6
SFXN2-209ENST00000602670 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
SFXN2-209ENST00000602670 CPDO75976 1380 aa18.81■□□□□ 0.6
SFXN2-209ENST00000602670 ANO8Q9HCE9 1232 aaPredicted RBP18.81■□□□□ 0.6
SFXN2-209ENST00000602670 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
SFXN2-209ENST00000602670 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
SFXN2-209ENST00000602670 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
SFXN2-209ENST00000602670 OVOS2A0A0G2JMS6 1433 aa18.8■□□□□ 0.6
SFXN2-209ENST00000602670 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
SFXN2-209ENST00000602670 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
SFXN2-209ENST00000602670 MYOM1P52179 1685 aa18.79■□□□□ 0.6
SFXN2-209ENST00000602670 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
SFXN2-209ENST00000602670 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
SFXN2-209ENST00000602670 ZNF784Q8NCA9 323 aaPredicted RBP18.79■□□□□ 0.6
SFXN2-209ENST00000602670 USP19O94966 1318 aa18.78■□□□□ 0.6
SFXN2-209ENST00000602670 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
SFXN2-209ENST00000602670 LRRC37A3O60309 1634 aa18.78■□□□□ 0.6
SFXN2-209ENST00000602670 ACEP12821 1306 aa18.77■□□□□ 0.6
SFXN2-209ENST00000602670 C11orf95C9JLR9 678 aaPredicted RBP18.77■□□□□ 0.6
SFXN2-209ENST00000602670 PLSCR1O15162 318 aa18.77■□□□□ 0.6
SFXN2-209ENST00000602670 CRB1P82279 1406 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 ZBTB7AO95365 584 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 PTGER2P43116 358 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
SFXN2-209ENST00000602670 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
SFXN2-209ENST00000602670 PLEKHG3A1L390 1219 aa18.72■□□□□ 0.59
SFXN2-209ENST00000602670 PROM2Q8N271 834 aa18.72■□□□□ 0.59
SFXN2-209ENST00000602670 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
SFXN2-209ENST00000602670 GCP02774 474 aa18.71■□□□□ 0.59
SFXN2-209ENST00000602670 DCAF11Q8TEB1 546 aa18.71■□□□□ 0.59
SFXN2-209ENST00000602670 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
SFXN2-209ENST00000602670 WNK3Q9BYP7 1800 aa18.7■□□□□ 0.58
SFXN2-209ENST00000602670 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
SFXN2-209ENST00000602670 CHD4Q14839 1912 aa18.69■□□□□ 0.58
SFXN2-209ENST00000602670 DDB1Q16531 1140 aa18.69■□□□□ 0.58
SFXN2-209ENST00000602670 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
SFXN2-209ENST00000602670 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
SFXN2-209ENST00000602670 BCL9O00512 1426 aa18.68■□□□□ 0.58
SFXN2-209ENST00000602670 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
SFXN2-209ENST00000602670 C1QTNF8P60827 252 aa18.67■□□□□ 0.58
SFXN2-209ENST00000602670 SYT17Q9BSW7 474 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms