RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 STAMBPO95630 424 aa14.49□□□□□ -0.09
SHANK2-218ENST00000601538 V9GYY5 206 aaPredicted RBP14.48□□□□□ -0.09
SHANK2-218ENST00000601538 CFAP57Q96MR6 1250 aa14.48□□□□□ -0.09
SHANK2-218ENST00000601538 CRACR2AQ9BSW2 395 aa14.48□□□□□ -0.09
SHANK2-218ENST00000601538 HIP1O00291 1037 aa14.48□□□□□ -0.09
SHANK2-218ENST00000601538 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
SHANK2-218ENST00000601538 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
SHANK2-218ENST00000601538 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
SHANK2-218ENST00000601538 TMCO3Q6UWJ1 677 aa14.48□□□□□ -0.09
SHANK2-218ENST00000601538 CDC45O75419 566 aa14.47□□□□□ -0.09
SHANK2-218ENST00000601538 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
SHANK2-218ENST00000601538 RBM10P98175 930 aaKnown RBP14.47□□□□□ -0.09
SHANK2-218ENST00000601538 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
SHANK2-218ENST00000601538 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
SHANK2-218ENST00000601538 BRD2P25440 801 aaKnown RBP14.46□□□□□ -0.09
SHANK2-218ENST00000601538 DZIP1LQ8IYY4 767 aaKnown RBP14.46□□□□□ -0.09
SHANK2-218ENST00000601538 RRBP1Q9P2E9 1410 aaKnown RBP14.46□□□□□ -0.09
SHANK2-218ENST00000601538 ANKRD62A6NC57 917 aa14.46□□□□□ -0.1
SHANK2-218ENST00000601538 POTEB2H3BUK9 544 aa14.46□□□□□ -0.1
SHANK2-218ENST00000601538 PAXBP1Q9Y5B6 917 aa14.46□□□□□ -0.1
SHANK2-218ENST00000601538 CCDC102AQ96A19 550 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 CCAR1Q8IX12 1150 aaKnown RBP14.45□□□□□ -0.1
SHANK2-218ENST00000601538 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
SHANK2-218ENST00000601538 UBXN4Q92575 508 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 DESP17661 470 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 PKD2Q13563 968 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 AEBP1Q8IUX7 1158 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 CCDC148Q8NFR7 591 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 GTF2E1P29083 439 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-218ENST00000601538 MCM4P33991 863 aa14.45□□□□□ -0.1
SHANK2-218ENST00000601538 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-218ENST00000601538 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 RBM25P49756 843 aaKnown RBP14.44□□□□□ -0.1
SHANK2-218ENST00000601538 DDX58O95786 925 aaKnown RBP14.44□□□□□ -0.1
SHANK2-218ENST00000601538 SERPINC1P01008 464 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 ANKRD1Q15327 319 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 KRT222Q8N1A0 295 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 ERICH4A6NGS2 130 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 CEP63Q96MT8 703 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 SETSIPP0DME0 302 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 GABPB1Q06547 395 aaPredicted RBP14.44□□□□□ -0.1
SHANK2-218ENST00000601538 TAX1BP1Q86VP1 789 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 RNF214Q8ND24 703 aa14.44□□□□□ -0.1
SHANK2-218ENST00000601538 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
SHANK2-218ENST00000601538 KIAA1328Q86T90 577 aa14.43□□□□□ -0.1
SHANK2-218ENST00000601538 FBXW7Q969H0 707 aa14.43□□□□□ -0.1
SHANK2-218ENST00000601538 CNTROBQ8N137 903 aa14.43□□□□□ -0.1
SHANK2-218ENST00000601538 USP47Q96K76 1375 aa14.43□□□□□ -0.1
SHANK2-218ENST00000601538 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHANK2-218ENST00000601538 IMMTQ16891 758 aaKnown RBP14.42□□□□□ -0.1
SHANK2-218ENST00000601538 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SHANK2-218ENST00000601538 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
SHANK2-218ENST00000601538 WDR33Q9C0J8 1336 aaKnown RBP14.42□□□□□ -0.1
SHANK2-218ENST00000601538 EXOC6Q8TAG9 804 aa14.42□□□□□ -0.1
SHANK2-218ENST00000601538 WIZO95785 1651 aa14.42□□□□□ -0.1
SHANK2-218ENST00000601538 WWC2Q6AWC2 1192 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 MPHOSPH9Q99550 1183 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 TNMDQ9H2S6 317 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 VPS37DQ86XT2 251 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 MSH5O43196 834 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 PDE3AQ14432 1141 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 SKIDA1Q1XH10 827 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 KIF18AQ8NI77 898 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 CCDC7Q96M83 1385 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 NUP155O75694 1391 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 AMPHP49418 695 aa14.41□□□□□ -0.1
SHANK2-218ENST00000601538 GIGYF2Q6Y7W6 1299 aaKnown RBP14.4□□□□□ -0.1
SHANK2-218ENST00000601538 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
SHANK2-218ENST00000601538 ZSCAN12O43309 604 aa14.4□□□□□ -0.1
SHANK2-218ENST00000601538 MYZAPP0CAP1 466 aa14.4□□□□□ -0.1
SHANK2-218ENST00000601538 GTF2A1P52655 376 aaPredicted RBP14.4□□□□□ -0.1
SHANK2-218ENST00000601538 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
SHANK2-218ENST00000601538 SPC24Q8NBT2 197 aa14.4□□□□□ -0.1
SHANK2-218ENST00000601538 SMTNL1A8MU46 457 aa14.4□□□□□ -0.11
SHANK2-218ENST00000601538 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 ANKRD18BA2A2Z9 1011 aa14.39□□□□□ -0.11
SHANK2-218ENST00000601538 CFAP45Q9UL16 551 aa14.39□□□□□ -0.11
SHANK2-218ENST00000601538 SAFB2Q14151 953 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 LIG1P18858 919 aa14.39□□□□□ -0.11
SHANK2-218ENST00000601538 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 C1orf141Q5JVX7 400 aa14.39□□□□□ -0.11
SHANK2-218ENST00000601538 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
SHANK2-218ENST00000601538 PAIP2Q9BPZ3 127 aaKnown RBP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 SEPT11Q9NVA2 429 aaKnown RBP14.39□□□□□ -0.11
SHANK2-218ENST00000601538 UTP14CQ5TAP6 766 aaKnown RBP14.38□□□□□ -0.11
SHANK2-218ENST00000601538 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
SHANK2-218ENST00000601538 KRT85P78386 507 aa14.38□□□□□ -0.11
SHANK2-218ENST00000601538 SH3BGRP55822 239 aaPredicted RBP14.38□□□□□ -0.11
SHANK2-218ENST00000601538 CEP57L1Q8IYX8 460 aa14.37□□□□□ -0.11
SHANK2-218ENST00000601538 A6NNZ2 444 aa14.37□□□□□ -0.11
SHANK2-218ENST00000601538 TUBB8Q3ZCM7 444 aa14.37□□□□□ -0.11
SHANK2-218ENST00000601538 TUBBP07437 444 aa14.37□□□□□ -0.11
SHANK2-218ENST00000601538 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■■□□□ 13.6
SHANK2-218ENST00000601538 SLC3A2P08195 630 aaKnown RBP14.37□□□□□ -0.11
SHANK2-218ENST00000601538 EPB41L2O43491 1005 aaKnown RBP14.36□□□□□ -0.11
SHANK2-218ENST00000601538 PRPF40AO75400 957 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms