RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, human

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC27A1-209	ENST00000600297	PLCH1	Q4KWH8	1693 aa		32.85	■■■□□ 2.85
SLC27A1-209	ENST00000600297	TOPAZ1	Q8N9V7	1692 aa		32.85	■■■□□ 2.85
SLC27A1-209	ENST00000600297	ALS2	Q96Q42	1657 aa		32.85	■■■□□ 2.85
SLC27A1-209	ENST00000600297	BCL9L	Q86UU0	1499 aa		32.85	■■■□□ 2.85
SLC27A1-209	ENST00000600297	NGDN	Q8NEJ9	315 aa	Known RBP	32.83	■■■□□ 2.85
SLC27A1-209	ENST00000600297	CABLES1	Q8TDN4	633 aa		32.81	■■■□□ 2.84
SLC27A1-209	ENST00000600297	NWD2	Q9ULI1	1742 aa		32.81	■■■□□ 2.84
SLC27A1-209	ENST00000600297	PLEKHG3	A1L390	1219 aa		32.8	■■■□□ 2.84
SLC27A1-209	ENST00000600297	SLIT2	O94813	1529 aa		32.8	■■■□□ 2.84
SLC27A1-209	ENST00000600297	CABP2	Q9NPB3	220 aa		32.79	■■■□□ 2.84
SLC27A1-209	ENST00000600297	POLR3A	O14802	1390 aa	Predicted RBP	32.78	■■■□□ 2.84
SLC27A1-209	ENST00000600297	SLC24A1	O60721	1099 aa		32.76	■■■□□ 2.83
SLC27A1-209	ENST00000600297	UNC5CL	Q8IV45	518 aa		32.75	■■■□□ 2.83
SLC27A1-209	ENST00000600297	PPIP5K1	Q6PFW1	1433 aa		32.75	■■■□□ 2.83
SLC27A1-209	ENST00000600297	CRYBG1	Q9Y4K1	1723 aa		32.74	■■■□□ 2.83
SLC27A1-209	ENST00000600297	ACE	P12821	1306 aa		32.73	■■■□□ 2.83
SLC27A1-209	ENST00000600297	PAK3	O75914	559 aa	Predicted RBP	32.72	■■■□□ 2.83
SLC27A1-209	ENST00000600297	GJD4	Q96KN9	370 aa	Predicted RBP	32.72	■■■□□ 2.83
SLC27A1-209	ENST00000600297	ATAD2	Q6PL18	1390 aa		32.71	■■■□□ 2.83
SLC27A1-209	ENST00000600297	GLI3	P10071	1580 aa		32.71	■■■□□ 2.83
SLC27A1-209	ENST00000600297	COL14A1	Q05707	1796 aa	Known RBP	32.68	■■■□□ 2.82
SLC27A1-209	ENST00000600297	ST20-MTHFS	A0A0A6YYL1	179 aa		32.68	■■■□□ 2.82
SLC27A1-209	ENST00000600297	CABP1	Q9NZU7	370 aa		32.67	■■■□□ 2.82
SLC27A1-209	ENST00000600297	NRAP	Q86VF7	1730 aa		32.67	■■■□□ 2.82
SLC27A1-209	ENST00000600297	BRWD3	Q6RI45	1802 aa		32.67	■■■□□ 2.82
SLC27A1-209	ENST00000600297	USP47	Q96K76	1375 aa		32.67	■■■□□ 2.82
SLC27A1-209	ENST00000600297	PUS7	Q96PZ0	661 aa	Known RBP	32.66	■■■□□ 2.82
SLC27A1-209	ENST00000600297	BRD4	O60885	1362 aa	Predicted RBP	32.66	■■■□□ 2.82
SLC27A1-209	ENST00000600297	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.65	■■■□□ 2.82
SLC27A1-209	ENST00000600297	TESK2	Q96S53	571 aa		32.64	■■■□□ 2.82
SLC27A1-209	ENST00000600297	CCDC9	Q9Y3X0	531 aa	Known RBP	32.62	■■■□□ 2.81
SLC27A1-209	ENST00000600297	FAM83G	A6ND36	823 aa		32.6	■■■□□ 2.81
SLC27A1-209	ENST00000600297	VPS72	Q15906	364 aa		32.6	■■■□□ 2.81
SLC27A1-209	ENST00000600297	ZNF692	Q9BU19	519 aa	Predicted RBP	32.6	■■■□□ 2.81
SLC27A1-209	ENST00000600297	AKAP12	Q02952	1782 aa		32.56	■■■□□ 2.8
SLC27A1-209	ENST00000600297	USP6	P35125	1406 aa		32.56	■■■□□ 2.8
SLC27A1-209	ENST00000600297	BTG4	Q9NY30	223 aa		32.54	■■■□□ 2.8
SLC27A1-209	ENST00000600297	TMF1	P82094	1093 aa		32.53	■■■□□ 2.8
SLC27A1-209	ENST00000600297	NUTM2G	Q5VZR2	741 aa		32.52	■■■□□ 2.8
SLC27A1-209	ENST00000600297	PRDM11	Q9NQV5	511 aa		32.52	■■■□□ 2.8
SLC27A1-209	ENST00000600297	CPSF1	Q10570	1443 aa	Known RBP	32.51	■■■□□ 2.8
SLC27A1-209	ENST00000600297	ABTB2	Q8N961	1025 aa		32.51	■■■□□ 2.79
SLC27A1-209	ENST00000600297	SSH2	Q76I76	1423 aa		32.5	■■■□□ 2.79
SLC27A1-209	ENST00000600297	NINL	Q9Y2I6	1382 aa		32.49	■■■□□ 2.79
SLC27A1-209	ENST00000600297	SEPT12	Q8IYM1	358 aa		32.49	■■■□□ 2.79
SLC27A1-209	ENST00000600297	CDCA8	Q53HL2	280 aa		32.48	■■■□□ 2.79
SLC27A1-209	ENST00000600297	NRK	Q7Z2Y5	1582 aa		32.48	■■■□□ 2.79
SLC27A1-209	ENST00000600297		A0A0G2JS52	829 aa		32.47	■■■□□ 2.79
SLC27A1-209	ENST00000600297	MYT1	Q01538	1121 aa		32.47	■■■□□ 2.79
SLC27A1-209	ENST00000600297	TMC1	Q8TDI8	760 aa		32.47	■■■□□ 2.79
SLC27A1-209	ENST00000600297	KIAA0232	Q92628	1395 aa		32.46	■■■□□ 2.79
SLC27A1-209	ENST00000600297	NLRP13	Q86W25	1043 aa		32.46	■■■□□ 2.79
SLC27A1-209	ENST00000600297	MON2	Q7Z3U7	1717 aa		32.46	■■■□□ 2.79
SLC27A1-209	ENST00000600297	KTN1	Q86UP2	1357 aa	Known RBP	32.45	■■■□□ 2.79
SLC27A1-209	ENST00000600297	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.44	■■■□□ 2.78	8e-7	■■■■■ 28.7
SLC27A1-209	ENST00000600297	SLC12A5	Q9H2X9	1139 aa		32.44	■■■□□ 2.78
SLC27A1-209	ENST00000600297	TERF2IP	Q9NYB0	399 aa		32.44	■■■□□ 2.78
SLC27A1-209	ENST00000600297	TTC21A	Q8NDW8	1320 aa		32.44	■■■□□ 2.78
SLC27A1-209	ENST00000600297	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.43	■■■□□ 2.78
SLC27A1-209	ENST00000600297	CD163L1	Q9NR16	1453 aa		32.42	■■■□□ 2.78
SLC27A1-209	ENST00000600297	ZC3H6	P61129	1189 aa	Known RBP	32.42	■■■□□ 2.78
SLC27A1-209	ENST00000600297	CCDC125	Q86Z20	511 aa		32.42	■■■□□ 2.78
SLC27A1-209	ENST00000600297	TTC21B	Q7Z4L5	1316 aa		32.42	■■■□□ 2.78
SLC27A1-209	ENST00000600297	CHRNA2	Q15822	529 aa		32.41	■■■□□ 2.78
SLC27A1-209	ENST00000600297	USP19	O94966	1318 aa		32.41	■■■□□ 2.78
SLC27A1-209	ENST00000600297	ONECUT3	O60422	494 aa	Predicted RBP	32.4	■■■□□ 2.78
SLC27A1-209	ENST00000600297	FAM98C	Q17RN3	349 aa	Known RBP	32.4	■■■□□ 2.78
SLC27A1-209	ENST00000600297	PIK3C2A	O00443	1686 aa		32.38	■■■□□ 2.77
SLC27A1-209	ENST00000600297	NLRP6	P59044	892 aa		32.38	■■■□□ 2.77
SLC27A1-209	ENST00000600297	KRT27	Q7Z3Y8	459 aa		32.38	■■■□□ 2.77
SLC27A1-209	ENST00000600297	EP400	Q96L91	3159 aa		32.38	■■■□□ 2.77
SLC27A1-209	ENST00000600297	SPATA31A5	Q5VU36	1347 aa		32.37	■■■□□ 2.77
SLC27A1-209	ENST00000600297	SPATA31A7	Q8IWB4	1347 aa		32.37	■■■□□ 2.77
SLC27A1-209	ENST00000600297	BLM	P54132	1417 aa	Predicted RBP	32.36	■■■□□ 2.77
SLC27A1-209	ENST00000600297	STRN4	Q9NRL3	753 aa		32.36	■■■□□ 2.77
SLC27A1-209	ENST00000600297	THSD7A	Q9UPZ6	1657 aa		32.35	■■■□□ 2.77
SLC27A1-209	ENST00000600297	EDC4	Q6P2E9	1401 aa	Known RBP	32.34	■■■□□ 2.77
SLC27A1-209	ENST00000600297		A0A1W2PP64	1363 aa		32.34	■■■□□ 2.77
SLC27A1-209	ENST00000600297	LMO7	Q8WWI1	1683 aa		32.34	■■■□□ 2.77
SLC27A1-209	ENST00000600297	GC	P02774	474 aa		32.33	■■■□□ 2.77
SLC27A1-209	ENST00000600297	HSPA5	P11021	654 aa	Known RBP	32.33	■■■□□ 2.77
SLC27A1-209	ENST00000600297	CPD	O75976	1380 aa		32.32	■■■□□ 2.76
SLC27A1-209	ENST00000600297	SLIT3	O75094	1523 aa		32.31	■■■□□ 2.76
SLC27A1-209	ENST00000600297	SF3B2	Q13435	895 aa	Known RBP	32.31	■■■□□ 2.76
SLC27A1-209	ENST00000600297	ANKRD36B	Q8N2N9	1353 aa		32.3	■■■□□ 2.76
SLC27A1-209	ENST00000600297	EVA1C	P58658	441 aa		32.29	■■■□□ 2.76
SLC27A1-209	ENST00000600297	CAMTA1	Q9Y6Y1	1673 aa		32.29	■■■□□ 2.76
SLC27A1-209	ENST00000600297	SPATA31A1	Q5TZJ5	1347 aa		32.28	■■■□□ 2.76
SLC27A1-209	ENST00000600297	USP54	Q70EL1	1684 aa		32.27	■■■□□ 2.76
SLC27A1-209	ENST00000600297	RGPD1	P0DJD0	1748 aa		32.27	■■■□□ 2.76
SLC27A1-209	ENST00000600297	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
SLC27A1-209	ENST00000600297	KCNH5	Q8NCM2	988 aa		32.27	■■■□□ 2.76
SLC27A1-209	ENST00000600297	USP31	Q70CQ4	1352 aa		32.27	■■■□□ 2.76
SLC27A1-209	ENST00000600297	ZBTB7C	A1YPR0	619 aa		32.25	■■■□□ 2.75
SLC27A1-209	ENST00000600297	USP35	Q9P2H5	1018 aa		32.23	■■■□□ 2.75
SLC27A1-209	ENST00000600297	MYOM1	P52179	1685 aa		32.22	■■■□□ 2.75
SLC27A1-209	ENST00000600297	ZRANB1	Q9UGI0	708 aa		32.22	■■■□□ 2.75
SLC27A1-209	ENST00000600297	NME9	Q86XW9	330 aa		32.2	■■■□□ 2.75
SLC27A1-209	ENST00000600297	DEFB132	Q7Z7B7	95 aa		32.19	■■■□□ 2.74
SLC27A1-209	ENST00000600297	RGPD5	Q99666	1765 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms