RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.393e-6■■■■□ 26.4
SYMPK-215ENST00000600237 RALYLQ86SE5 291 aaKnown RBP17.5■□□□□ 0.39
SYMPK-215ENST00000600237 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
SYMPK-215ENST00000600237 CUL7Q14999 1698 aa17.49■□□□□ 0.39
SYMPK-215ENST00000600237 ERICH2A1L162 156 aa17.49■□□□□ 0.39
SYMPK-215ENST00000600237 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
SYMPK-215ENST00000600237 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
SYMPK-215ENST00000600237 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
SYMPK-215ENST00000600237 WDR63Q8IWG1 891 aa17.48■□□□□ 0.39
SYMPK-215ENST00000600237 LETM1O95202 739 aaPredicted RBP17.48■□□□□ 0.39
SYMPK-215ENST00000600237 PDCP20941 246 aa17.48■□□□□ 0.39
SYMPK-215ENST00000600237 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
SYMPK-215ENST00000600237 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
SYMPK-215ENST00000600237 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
SYMPK-215ENST00000600237 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
SYMPK-215ENST00000600237 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
SYMPK-215ENST00000600237 NAT10Q9H0A0 1025 aaKnown RBP17.47■□□□□ 0.39
SYMPK-215ENST00000600237 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
SYMPK-215ENST00000600237 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
SYMPK-215ENST00000600237 TEX35Q5T0J7 233 aa17.46■□□□□ 0.39
SYMPK-215ENST00000600237 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
SYMPK-215ENST00000600237 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
SYMPK-215ENST00000600237 NEK4P51957 841 aa17.46■□□□□ 0.39
SYMPK-215ENST00000600237 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
SYMPK-215ENST00000600237 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
SYMPK-215ENST00000600237 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
SYMPK-215ENST00000600237 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.38
SYMPK-215ENST00000600237 HIP1O00291 1037 aa17.45■□□□□ 0.38
SYMPK-215ENST00000600237 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
SYMPK-215ENST00000600237 MAP7D2Q96T17 732 aa17.45■□□□□ 0.38
SYMPK-215ENST00000600237 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
SYMPK-215ENST00000600237 VPS37DQ86XT2 251 aa17.45■□□□□ 0.38
SYMPK-215ENST00000600237 ZNF771Q7L3S4 317 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-215ENST00000600237 PCMTD1Q96MG8 357 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-215ENST00000600237 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-215ENST00000600237 SETQ01105 290 aaPredicted RBP17.44■□□□□ 0.38
SYMPK-215ENST00000600237 RTEL1-TNFRSF6BF6WH68 1400 aa17.44■□□□□ 0.38
SYMPK-215ENST00000600237 NEUROD6Q96NK8 337 aa17.44■□□□□ 0.38
SYMPK-215ENST00000600237 FSD1Q9BTV5 496 aa17.43■□□□□ 0.38
SYMPK-215ENST00000600237 SDF4Q9BRK5 362 aa17.43■□□□□ 0.38
SYMPK-215ENST00000600237 BCAR3O75815 825 aa17.43■□□□□ 0.38
SYMPK-215ENST00000600237 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
SYMPK-215ENST00000600237 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
SYMPK-215ENST00000600237 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
SYMPK-215ENST00000600237 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
SYMPK-215ENST00000600237 GNAI2P04899 355 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 PDE4CQ08493 712 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 ATF7IPQ6VMQ6 1270 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
SYMPK-215ENST00000600237 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
SYMPK-215ENST00000600237 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
SYMPK-215ENST00000600237 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
SYMPK-215ENST00000600237 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
SYMPK-215ENST00000600237 RNF214Q8ND24 703 aa17.41■□□□□ 0.38
SYMPK-215ENST00000600237 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
SYMPK-215ENST00000600237 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
SYMPK-215ENST00000600237 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
SYMPK-215ENST00000600237 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
SYMPK-215ENST00000600237 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
SYMPK-215ENST00000600237 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
SYMPK-215ENST00000600237 XBP1P17861 261 aa17.39■□□□□ 0.37
SYMPK-215ENST00000600237 OLFM4Q6UX06 510 aa17.39■□□□□ 0.37
SYMPK-215ENST00000600237 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
SYMPK-215ENST00000600237 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
SYMPK-215ENST00000600237 DHX16O60231 1041 aaKnown RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
SYMPK-215ENST00000600237 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
SYMPK-215ENST00000600237 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 NAIPQ13075 1403 aa17.38■□□□□ 0.37
SYMPK-215ENST00000600237 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
SYMPK-215ENST00000600237 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
SYMPK-215ENST00000600237 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
SYMPK-215ENST00000600237 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
SYMPK-215ENST00000600237 TRIM5Q9C035 493 aa17.37■□□□□ 0.37
SYMPK-215ENST00000600237 PCF11O94913 1555 aaKnown RBP17.37■□□□□ 0.37
SYMPK-215ENST00000600237 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-215ENST00000600237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-215ENST00000600237 KIF14Q15058 1648 aa17.36■□□□□ 0.37
SYMPK-215ENST00000600237 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-215ENST00000600237 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
SYMPK-215ENST00000600237 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
SYMPK-215ENST00000600237 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
SYMPK-215ENST00000600237 C1orf115Q9H7X2 142 aa17.35■□□□□ 0.37
SYMPK-215ENST00000600237 FOSBP53539 338 aa17.35■□□□□ 0.37
SYMPK-215ENST00000600237 TCEAL9Q9UHQ7 104 aa17.35■□□□□ 0.37
SYMPK-215ENST00000600237 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
SYMPK-215ENST00000600237 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 HDGFL1Q5TGJ6 251 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 LRRCC1Q9C099 1032 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 TBC1D2BQ9UPU7 963 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 WDR33Q9C0J8 1336 aaKnown RBP17.34■□□□□ 0.37
SYMPK-215ENST00000600237 RBM33Q96EV2 1170 aaKnown RBP17.34■□□□□ 0.37
SYMPK-215ENST00000600237 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms