RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 NEUROD1Q13562 356 aa26.78■■□□□ 1.88
SNRPA-206ENST00000599362 VPS72Q15906 364 aa26.78■■□□□ 1.88
SNRPA-206ENST00000599362 TRPM1Q7Z4N2 1603 aa26.78■■□□□ 1.88
SNRPA-206ENST00000599362 CRYBG1Q9Y4K1 1723 aa26.77■■□□□ 1.88
SNRPA-206ENST00000599362 ACEP12821 1306 aa26.76■■□□□ 1.87
SNRPA-206ENST00000599362 PAK3O75914 559 aaPredicted RBP26.76■■□□□ 1.87
SNRPA-206ENST00000599362 NBPF8Q3BBV2 869 aa26.74■■□□□ 1.87
SNRPA-206ENST00000599362 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
SNRPA-206ENST00000599362 COL14A1Q05707 1796 aaKnown RBP26.71■■□□□ 1.87
SNRPA-206ENST00000599362 NRAPQ86VF7 1730 aa26.71■■□□□ 1.87
SNRPA-206ENST00000599362 SRPK2P78362 688 aaKnown RBP26.71■■□□□ 1.87
SNRPA-206ENST00000599362 ONECUT3O60422 494 aaPredicted RBP26.7■■□□□ 1.86
SNRPA-206ENST00000599362 ROCK2O75116 1388 aaKnown RBP26.7■■□□□ 1.86
SNRPA-206ENST00000599362 PPIP5K1Q6PFW1 1433 aa26.69■■□□□ 1.86
SNRPA-206ENST00000599362 CABP2Q9NPB3 220 aa26.69■■□□□ 1.86
SNRPA-206ENST00000599362 BTG4Q9NY30 223 aa26.68■■□□□ 1.86
SNRPA-206ENST00000599362 PHRF1Q9P1Y6 1649 aaKnown RBP26.65■■□□□ 1.86
SNRPA-206ENST00000599362 SEPT12Q8IYM1 358 aa26.65■■□□□ 1.86
SNRPA-206ENST00000599362 CCDC9Q9Y3X0 531 aaKnown RBP26.65■■□□□ 1.86
SNRPA-206ENST00000599362 BRD4O60885 1362 aaPredicted RBP26.64■■□□□ 1.86
SNRPA-206ENST00000599362 TRIM26Q12899 539 aaPredicted RBP26.64■■□□□ 1.86
SNRPA-206ENST00000599362 EVC2Q86UK5 1308 aa26.64■■□□□ 1.85
SNRPA-206ENST00000599362 BRWD3Q6RI45 1802 aa26.63■■□□□ 1.85
SNRPA-206ENST00000599362 CCDC125Q86Z20 511 aa26.63■■□□□ 1.85
SNRPA-206ENST00000599362 PRDM11Q9NQV5 511 aa26.63■■□□□ 1.85
SNRPA-206ENST00000599362 KIAA0232Q92628 1395 aa26.62■■□□□ 1.85
SNRPA-206ENST00000599362 NUTM2GQ5VZR2 741 aa26.62■■□□□ 1.85
SNRPA-206ENST00000599362 ABTB2Q8N961 1025 aa26.61■■□□□ 1.85
SNRPA-206ENST00000599362 CABP1Q9NZU7 370 aa26.61■■□□□ 1.85
SNRPA-206ENST00000599362 USP19O94966 1318 aa26.61■■□□□ 1.85
SNRPA-206ENST00000599362 EP400Q96L91 3159 aa26.59■■□□□ 1.85
SNRPA-206ENST00000599362 SPATA31A5Q5VU36 1347 aa26.59■■□□□ 1.85
SNRPA-206ENST00000599362 SPATA31A7Q8IWB4 1347 aa26.59■■□□□ 1.85
SNRPA-206ENST00000599362 USP6P35125 1406 aa26.58■■□□□ 1.85
SNRPA-206ENST00000599362 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
SNRPA-206ENST00000599362 ZC3H6P61129 1189 aaKnown RBP26.57■■□□□ 1.84
SNRPA-206ENST00000599362 CHRNA2Q15822 529 aa26.56■■□□□ 1.84
SNRPA-206ENST00000599362 NLRP13Q86W25 1043 aa26.56■■□□□ 1.84
SNRPA-206ENST00000599362 TONSLQ96HA7 1378 aa26.56■■□□□ 1.84
SNRPA-206ENST00000599362 SSH2Q76I76 1423 aa26.56■■□□□ 1.84
SNRPA-206ENST00000599362 FAM98CQ17RN3 349 aaKnown RBP26.55■■□□□ 1.84
SNRPA-206ENST00000599362 KRT27Q7Z3Y8 459 aa26.55■■□□□ 1.84
SNRPA-206ENST00000599362 CPDO75976 1380 aa26.55■■□□□ 1.84
SNRPA-206ENST00000599362 SBNO2Q9Y2G9 1366 aa26.55■■□□□ 1.84
SNRPA-206ENST00000599362 BLMP54132 1417 aaPredicted RBP26.55■■□□□ 1.84
SNRPA-206ENST00000599362 CARD11Q9BXL7 1154 aa26.52■■□□□ 1.84
SNRPA-206ENST00000599362 GCP02774 474 aa26.51■■□□□ 1.83
SNRPA-206ENST00000599362 SPATA31A1Q5TZJ5 1347 aa26.5■■□□□ 1.83
SNRPA-206ENST00000599362 LMO7Q8WWI1 1683 aa26.5■■□□□ 1.83
SNRPA-206ENST00000599362 THSD7AQ9UPZ6 1657 aa26.5■■□□□ 1.83
SNRPA-206ENST00000599362 ZNF692Q9BU19 519 aaPredicted RBP26.49■■□□□ 1.83
SNRPA-206ENST00000599362 CAMTA1Q9Y6Y1 1673 aa26.49■■□□□ 1.83
SNRPA-206ENST00000599362 A0A0G2JS52 829 aa26.48■■□□□ 1.83
SNRPA-206ENST00000599362 MYT1Q01538 1121 aa26.48■■□□□ 1.83
SNRPA-206ENST00000599362 SLIT3O75094 1523 aa26.48■■□□□ 1.83
SNRPA-206ENST00000599362 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
SNRPA-206ENST00000599362 NLRP6P59044 892 aa26.47■■□□□ 1.83
SNRPA-206ENST00000599362 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
SNRPA-206ENST00000599362 AKAP12Q02952 1782 aa26.46■■□□□ 1.83
SNRPA-206ENST00000599362 PIK3C2AO00443 1686 aa26.46■■□□□ 1.83
SNRPA-206ENST00000599362 TTC21BQ7Z4L5 1316 aa26.44■■□□□ 1.82
SNRPA-206ENST00000599362 EVA1CP58658 441 aa26.43■■□□□ 1.82
SNRPA-206ENST00000599362 TTC21AQ8NDW8 1320 aa26.41■■□□□ 1.82
SNRPA-206ENST00000599362 SF3B2Q13435 895 aaKnown RBP26.41■■□□□ 1.82
SNRPA-206ENST00000599362 LARP1Q6PKG0 1096 aaKnown RBP26.41■■□□□ 1.82
SNRPA-206ENST00000599362 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
SNRPA-206ENST00000599362 DEFB132Q7Z7B7 95 aa26.4■■□□□ 1.82
SNRPA-206ENST00000599362 AATKQ6ZMQ8 1374 aa26.4■■□□□ 1.82
SNRPA-206ENST00000599362 COL5A2P05997 1499 aaPredicted RBP26.4■■□□□ 1.82
SNRPA-206ENST00000599362 ZRANB1Q9UGI0 708 aa26.39■■□□□ 1.82
SNRPA-206ENST00000599362 KTN1Q86UP2 1357 aaKnown RBP26.38■■□□□ 1.81
SNRPA-206ENST00000599362 PUS7Q96PZ0 661 aaKnown RBP26.37■■□□□ 1.81
SNRPA-206ENST00000599362 MON2Q7Z3U7 1717 aa26.36■■□□□ 1.81
SNRPA-206ENST00000599362 CD163L1Q9NR16 1453 aa26.36■■□□□ 1.81
SNRPA-206ENST00000599362 TCP11L2Q8N4U5 519 aa26.36■■□□□ 1.81
SNRPA-206ENST00000599362 USP35Q9P2H5 1018 aa26.36■■□□□ 1.81
SNRPA-206ENST00000599362 THRAP3Q9Y2W1 955 aaKnown RBP26.36■■□□□ 1.81
SNRPA-206ENST00000599362 FAM182BQ5T319 152 aa26.35■■□□□ 1.81
SNRPA-206ENST00000599362 COL18A1P39060 1754 aa26.35■■□□□ 1.81
SNRPA-206ENST00000599362 KCNH5Q8NCM2 988 aa26.34■■□□□ 1.81
SNRPA-206ENST00000599362 ARHGEF25Q86VW2 580 aa26.33■■□□□ 1.81
SNRPA-206ENST00000599362 TESK2Q96S53 571 aa26.33■■□□□ 1.81
SNRPA-206ENST00000599362 CRB1P82279 1406 aa26.32■■□□□ 1.8
SNRPA-206ENST00000599362 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
SNRPA-206ENST00000599362 ZBTB7CA1YPR0 619 aa26.31■■□□□ 1.8
SNRPA-206ENST00000599362 BAG6P46379 1132 aa26.31■■□□□ 1.8
SNRPA-206ENST00000599362 USP31Q70CQ4 1352 aa26.31■■□□□ 1.8
SNRPA-206ENST00000599362 NFAT5O94916 1531 aa26.3■■□□□ 1.8
SNRPA-206ENST00000599362 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
SNRPA-206ENST00000599362 USP54Q70EL1 1684 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 ST20-MTHFSA0A0A6YYL1 179 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 FAM196AQ6ZSG2 479 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 TMC1Q8TDI8 760 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 AXIN2Q9Y2T1 843 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 DISP2A7MBM2 1401 aa26.29■■□□□ 1.8
SNRPA-206ENST00000599362 HDGFL2Q7Z4V5 671 aaPredicted RBP26.28■■□□□ 1.8
SNRPA-206ENST00000599362 SLC24A1O60721 1099 aa26.27■■□□□ 1.8
SNRPA-206ENST00000599362 TNS1Q9HBL0 1735 aaKnown RBP26.26■■□□□ 1.79
SNRPA-206ENST00000599362 PARP4Q9UKK3 1724 aaKnown RBP26.26■■□□□ 1.79
SNRPA-206ENST00000599362 EDC4Q6P2E9 1401 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms