RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
SCAF1-203ENST00000598359 ACEP12821 1306 aa19.74■□□□□ 0.75
SCAF1-203ENST00000598359 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
SCAF1-203ENST00000598359 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
SCAF1-203ENST00000598359 GJD4Q96KN9 370 aaPredicted RBP19.73■□□□□ 0.75
SCAF1-203ENST00000598359 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
SCAF1-203ENST00000598359 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
SCAF1-203ENST00000598359 FAM83GA6ND36 823 aa19.72■□□□□ 0.75
SCAF1-203ENST00000598359 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
SCAF1-203ENST00000598359 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.72■□□□□ 0.75
SCAF1-203ENST00000598359 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
SCAF1-203ENST00000598359 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
SCAF1-203ENST00000598359 GLI3P10071 1580 aa19.7■□□□□ 0.74
SCAF1-203ENST00000598359 PLEKHG3A1L390 1219 aa19.7■□□□□ 0.74
SCAF1-203ENST00000598359 PPIP5K1Q6PFW1 1433 aa19.69■□□□□ 0.74
SCAF1-203ENST00000598359 CRYBG1Q9Y4K1 1723 aa19.68■□□□□ 0.74
SCAF1-203ENST00000598359 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
SCAF1-203ENST00000598359 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
SCAF1-203ENST00000598359 NWD2Q9ULI1 1742 aa19.66■□□□□ 0.74
SCAF1-203ENST00000598359 VPS72Q15906 364 aa19.66■□□□□ 0.74
SCAF1-203ENST00000598359 BTG4Q9NY30 223 aa19.66■□□□□ 0.74
SCAF1-203ENST00000598359 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
SCAF1-203ENST00000598359 COL14A1Q05707 1796 aaKnown RBP19.63■□□□□ 0.73
SCAF1-203ENST00000598359 NRAPQ86VF7 1730 aa19.63■□□□□ 0.73
SCAF1-203ENST00000598359 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
SCAF1-203ENST00000598359 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
SCAF1-203ENST00000598359 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
SCAF1-203ENST00000598359 CHRNA2Q15822 529 aa19.63■□□□□ 0.73
SCAF1-203ENST00000598359 PRDM11Q9NQV5 511 aa19.63■□□□□ 0.73
SCAF1-203ENST00000598359 KIAA0232Q92628 1395 aa19.62■□□□□ 0.73
SCAF1-203ENST00000598359 ABTB2Q8N961 1025 aa19.62■□□□□ 0.73
SCAF1-203ENST00000598359 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
SCAF1-203ENST00000598359 LRP5O75197 1615 aa19.62■□□□□ 0.73
SCAF1-203ENST00000598359 BRWD3Q6RI45 1802 aa19.61■□□□□ 0.73
SCAF1-203ENST00000598359 SEPT12Q8IYM1 358 aa19.61■□□□□ 0.73
SCAF1-203ENST00000598359 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.72
SCAF1-203ENST00000598359 USP6P35125 1406 aa19.58■□□□□ 0.72
SCAF1-203ENST00000598359 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
SCAF1-203ENST00000598359 A0A0G2JS52 829 aa19.57■□□□□ 0.72
SCAF1-203ENST00000598359 MYT1Q01538 1121 aa19.57■□□□□ 0.72
SCAF1-203ENST00000598359 NRKQ7Z2Y5 1582 aa19.57■□□□□ 0.72
SCAF1-203ENST00000598359 USP19O94966 1318 aa19.56■□□□□ 0.72
SCAF1-203ENST00000598359 DEFB132Q7Z7B7 95 aa19.55■□□□□ 0.72
SCAF1-203ENST00000598359 STRN4Q9NRL3 753 aa19.55■□□□□ 0.72
SCAF1-203ENST00000598359 ONECUT3O60422 494 aaPredicted RBP19.54■□□□□ 0.72
SCAF1-203ENST00000598359 NLRP13Q86W25 1043 aa19.54■□□□□ 0.72
SCAF1-203ENST00000598359 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
SCAF1-203ENST00000598359 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
SCAF1-203ENST00000598359 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
SCAF1-203ENST00000598359 GCP02774 474 aa19.53■□□□□ 0.72
SCAF1-203ENST00000598359 NLRP6P59044 892 aa19.53■□□□□ 0.72
SCAF1-203ENST00000598359 ZBTB7CA1YPR0 619 aa19.52■□□□□ 0.72
SCAF1-203ENST00000598359 PIK3C2AO00443 1686 aa19.52■□□□□ 0.71
SCAF1-203ENST00000598359 KRT27Q7Z3Y8 459 aa19.51■□□□□ 0.71
SCAF1-203ENST00000598359 CAMTA1Q9Y6Y1 1673 aa19.5■□□□□ 0.71
SCAF1-203ENST00000598359 BRD4O60885 1362 aaPredicted RBP19.5■□□□□ 0.71
SCAF1-203ENST00000598359 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
SCAF1-203ENST00000598359 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
SCAF1-203ENST00000598359 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
SCAF1-203ENST00000598359 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
SCAF1-203ENST00000598359 CPDO75976 1380 aa19.49■□□□□ 0.71
SCAF1-203ENST00000598359 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
SCAF1-203ENST00000598359 USP35Q9P2H5 1018 aa19.49■□□□□ 0.71
SCAF1-203ENST00000598359 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
SCAF1-203ENST00000598359 SPATA31A1Q5TZJ5 1347 aa19.49■□□□□ 0.71
SCAF1-203ENST00000598359 EVA1CP58658 441 aa19.48■□□□□ 0.71
SCAF1-203ENST00000598359 LMO7Q8WWI1 1683 aa19.48■□□□□ 0.71
SCAF1-203ENST00000598359 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
SCAF1-203ENST00000598359 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
SCAF1-203ENST00000598359 SLIT3O75094 1523 aa19.47■□□□□ 0.71
SCAF1-203ENST00000598359 SOX12O15370 315 aa19.47■□□□□ 0.71
SCAF1-203ENST00000598359 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
SCAF1-203ENST00000598359 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
SCAF1-203ENST00000598359 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
SCAF1-203ENST00000598359 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
SCAF1-203ENST00000598359 THSD7AQ9UPZ6 1657 aa19.46■□□□□ 0.71
SCAF1-203ENST00000598359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.7
SCAF1-203ENST00000598359 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
SCAF1-203ENST00000598359 CD163L1Q9NR16 1453 aa19.45■□□□□ 0.7
SCAF1-203ENST00000598359 PSDA5PKW4 1024 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-203ENST00000598359 TESK2Q96S53 571 aa19.44■□□□□ 0.7
SCAF1-203ENST00000598359 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
SCAF1-203ENST00000598359 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
SCAF1-203ENST00000598359 COL5A2P05997 1499 aaPredicted RBP19.42■□□□□ 0.7
SCAF1-203ENST00000598359 NME9Q86XW9 330 aa19.4■□□□□ 0.7
SCAF1-203ENST00000598359 AXIN2Q9Y2T1 843 aa19.4■□□□□ 0.7
SCAF1-203ENST00000598359 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
SCAF1-203ENST00000598359 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
SCAF1-203ENST00000598359 COL18A1P39060 1754 aa19.38■□□□□ 0.69
SCAF1-203ENST00000598359 HDGFL2Q7Z4V5 671 aaPredicted RBP19.38■□□□□ 0.69
SCAF1-203ENST00000598359 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
SCAF1-203ENST00000598359 USP47Q96K76 1375 aa19.38■□□□□ 0.69
SCAF1-203ENST00000598359 NFAT5O94916 1531 aa19.37■□□□□ 0.69
SCAF1-203ENST00000598359 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
SCAF1-203ENST00000598359 ARHGEF25Q86VW2 580 aa19.37■□□□□ 0.69
SCAF1-203ENST00000598359 KCNH5Q8NCM2 988 aa19.37■□□□□ 0.69
SCAF1-203ENST00000598359 CRB1P82279 1406 aa19.35■□□□□ 0.69
SCAF1-203ENST00000598359 BAG6P46379 1132 aa19.35■□□□□ 0.69
SCAF1-203ENST00000598359 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
SCAF1-203ENST00000598359 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms