RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 QTRT2Q9H974 415 aaKnown RBP32.18■■■□□ 2.74
IRF3-220ENST00000598108 USP21Q9UK80 565 aa32.18■■■□□ 2.74
IRF3-220ENST00000598108 NUTM2GQ5VZR2 741 aa32.17■■■□□ 2.74
IRF3-220ENST00000598108 ATAD2Q6PL18 1390 aa32.17■■■□□ 2.74
IRF3-220ENST00000598108 USP47Q96K76 1375 aa32.17■■■□□ 2.74
IRF3-220ENST00000598108 ALS2Q96Q42 1657 aa32.15■■■□□ 2.74
IRF3-220ENST00000598108 RXRBP28702 533 aa32.13■■■□□ 2.73
IRF3-220ENST00000598108 ABTB2Q8N961 1025 aa32.12■■■□□ 2.73
IRF3-220ENST00000598108 FAM83GA6ND36 823 aa32.11■■■□□ 2.73
IRF3-220ENST00000598108 BCL9LQ86UU0 1499 aa32.1■■■□□ 2.73
IRF3-220ENST00000598108 USP6P35125 1406 aa32.1■■■□□ 2.73
IRF3-220ENST00000598108 PUS7Q96PZ0 661 aaKnown RBP32.09■■■□□ 2.73
IRF3-220ENST00000598108 SLC12A5Q9H2X9 1139 aa32.09■■■□□ 2.73
IRF3-220ENST00000598108 ZNF692Q9BU19 519 aaPredicted RBP32.08■■■□□ 2.73
IRF3-220ENST00000598108 SSH2Q76I76 1423 aa32.08■■■□□ 2.73
IRF3-220ENST00000598108 TMC1Q8TDI8 760 aa32.07■■■□□ 2.72
IRF3-220ENST00000598108 TRPC5Q9UL62 973 aaPredicted RBP32.07■■■□□ 2.72
IRF3-220ENST00000598108 BRD4O60885 1362 aaPredicted RBP32.07■■■□□ 2.72
IRF3-220ENST00000598108 CPSF1Q10570 1443 aaKnown RBP32.06■■■□□ 2.72
IRF3-220ENST00000598108 SLIT2O94813 1529 aa32.05■■■□□ 2.72
IRF3-220ENST00000598108 SLC24A1O60721 1099 aa32.05■■■□□ 2.72
IRF3-220ENST00000598108 RBM6P78332 1123 aaKnown RBP32.05■■■□□ 2.72
IRF3-220ENST00000598108 UNC5CLQ8IV45 518 aa32.05■■■□□ 2.72
IRF3-220ENST00000598108 ATRNO75882 1429 aa32.03■■■□□ 2.72
IRF3-220ENST00000598108 TTC21BQ7Z4L5 1316 aa32.02■■■□□ 2.72
IRF3-220ENST00000598108 NLRP13Q86W25 1043 aa32.02■■■□□ 2.72
IRF3-220ENST00000598108 ABCA3Q99758 1704 aa32.02■■■□□ 2.72
IRF3-220ENST00000598108 MARF1Q9Y4F3 1742 aaKnown RBP32.01■■■□□ 2.72
IRF3-220ENST00000598108 USP19O94966 1318 aa32■■■□□ 2.71
IRF3-220ENST00000598108 CD163L1Q9NR16 1453 aa32■■■□□ 2.71
IRF3-220ENST00000598108 KTN1Q86UP2 1357 aaKnown RBP32■■■□□ 2.71
IRF3-220ENST00000598108 ZC3H6P61129 1189 aaKnown RBP32■■■□□ 2.71
IRF3-220ENST00000598108 TMF1P82094 1093 aa32■■■□□ 2.71
IRF3-220ENST00000598108 NLRP6P59044 892 aa31.99■■■□□ 2.71
IRF3-220ENST00000598108 KIAA0232Q92628 1395 aa31.97■■■□□ 2.71
IRF3-220ENST00000598108 PRDM11Q9NQV5 511 aa31.97■■■□□ 2.71
IRF3-220ENST00000598108 GCP02774 474 aa31.96■■■□□ 2.71
IRF3-220ENST00000598108 GJD4Q96KN9 370 aaPredicted RBP31.96■■■□□ 2.71
IRF3-220ENST00000598108 BTG4Q9NY30 223 aa31.96■■■□□ 2.71
IRF3-220ENST00000598108 CRYBG1Q9Y4K1 1723 aa31.95■■■□□ 2.71
IRF3-220ENST00000598108 CHRNA2Q15822 529 aa31.95■■■□□ 2.71
IRF3-220ENST00000598108 HDGFL2Q7Z4V5 671 aaPredicted RBP31.94■■■□□ 2.7
IRF3-220ENST00000598108 CDK12Q9NYV4 1490 aaPredicted RBP31.93■■■□□ 2.7
IRF3-220ENST00000598108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.93■■■□□ 2.7
IRF3-220ENST00000598108 TERF2IPQ9NYB0 399 aa31.93■■■□□ 2.7
IRF3-220ENST00000598108 TTC21AQ8NDW8 1320 aa31.93■■■□□ 2.7
IRF3-220ENST00000598108 VPS72Q15906 364 aa31.91■■■□□ 2.7
IRF3-220ENST00000598108 ZRANB1Q9UGI0 708 aa31.91■■■□□ 2.7
IRF3-220ENST00000598108 A0A1W2PP64 1363 aa31.91■■■□□ 2.7
IRF3-220ENST00000598108 RGS12O14924 1447 aa31.91■■■□□ 2.7
IRF3-220ENST00000598108 HSPA5P11021 654 aaKnown RBP31.9■■■□□ 2.7
IRF3-220ENST00000598108 EIF4G2P78344 907 aaKnown RBP eCLIP31.9■■■□□ 2.7
IRF3-220ENST00000598108 AKAP12Q02952 1782 aa31.89■■■□□ 2.7
IRF3-220ENST00000598108 NME9Q86XW9 330 aa31.88■■■□□ 2.69
IRF3-220ENST00000598108 NINLQ9Y2I6 1382 aa31.88■■■□□ 2.69
IRF3-220ENST00000598108 PHRF1Q9P1Y6 1649 aaKnown RBP31.88■■■□□ 2.69
IRF3-220ENST00000598108 CDCA8Q53HL2 280 aa31.87■■■□□ 2.69
IRF3-220ENST00000598108 CPDO75976 1380 aa31.86■■■□□ 2.69
IRF3-220ENST00000598108 PIK3C2AO00443 1686 aa31.86■■■□□ 2.69
IRF3-220ENST00000598108 CCDC9Q9Y3X0 531 aaKnown RBP31.85■■■□□ 2.69
IRF3-220ENST00000598108 PLCH1Q4KWH8 1693 aa31.85■■■□□ 2.69
IRF3-220ENST00000598108 NRKQ7Z2Y5 1582 aa31.85■■■□□ 2.69
IRF3-220ENST00000598108 COL14A1Q05707 1796 aaKnown RBP31.84■■■□□ 2.69
IRF3-220ENST00000598108 EDC4Q6P2E9 1401 aaKnown RBP31.83■■■□□ 2.69
IRF3-220ENST00000598108 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.83■■■□□ 2.69
IRF3-220ENST00000598108 SLIT3O75094 1523 aa31.82■■■□□ 2.68
IRF3-220ENST00000598108 NWD2Q9ULI1 1742 aa31.81■■■□□ 2.68
IRF3-220ENST00000598108 SOX12O15370 315 aa31.81■■■□□ 2.68
IRF3-220ENST00000598108 GLI3P10071 1580 aa31.81■■■□□ 2.68
IRF3-220ENST00000598108 USP31Q70CQ4 1352 aa31.81■■■□□ 2.68
IRF3-220ENST00000598108 MON2Q7Z3U7 1717 aa31.8■■■□□ 2.68
IRF3-220ENST00000598108 ZBTB7CA1YPR0 619 aa31.8■■■□□ 2.68
IRF3-220ENST00000598108 ANKRD36BQ8N2N9 1353 aa31.8■■■□□ 2.68
IRF3-220ENST00000598108 STRN4Q9NRL3 753 aa31.79■■■□□ 2.68
IRF3-220ENST00000598108 KCNH5Q8NCM2 988 aa31.78■■■□□ 2.68
IRF3-220ENST00000598108 ARHGEF25Q86VW2 580 aa31.77■■■□□ 2.68
IRF3-220ENST00000598108 SPATA31A5Q5VU36 1347 aa31.76■■■□□ 2.68
IRF3-220ENST00000598108 SPATA31A7Q8IWB4 1347 aa31.76■■■□□ 2.68
IRF3-220ENST00000598108 NRAPQ86VF7 1730 aa31.76■■■□□ 2.67
IRF3-220ENST00000598108 ONECUT3O60422 494 aaPredicted RBP31.76■■■□□ 2.67
IRF3-220ENST00000598108 CAMTA1Q9Y6Y1 1673 aa31.76■■■□□ 2.67
IRF3-220ENST00000598108 EVA1CP58658 441 aa31.75■■■□□ 2.67
IRF3-220ENST00000598108 SEPT12Q8IYM1 358 aa31.74■■■□□ 2.67
IRF3-220ENST00000598108 AATKQ6ZMQ8 1374 aa31.73■■■□□ 2.67
IRF3-220ENST00000598108 POLR3GLQ9BT43 218 aa31.73■■■□□ 2.67
IRF3-220ENST00000598108 AXIN2Q9Y2T1 843 aa31.73■■■□□ 2.67
IRF3-220ENST00000598108 FAM98CQ17RN3 349 aaKnown RBP31.72■■■□□ 2.67
IRF3-220ENST00000598108 LARP1Q6PKG0 1096 aaKnown RBP31.72■■■□□ 2.67
IRF3-220ENST00000598108 UPF1Q92900 1129 aaKnown RBP eCLIP31.72■■■□□ 2.67
IRF3-220ENST00000598108 CARD14Q9BXL6 1004 aa31.72■■■□□ 2.67
IRF3-220ENST00000598108 C11orf95C9JLR9 678 aaPredicted RBP31.71■■■□□ 2.67
IRF3-220ENST00000598108 SPATA31A1Q5TZJ5 1347 aa31.7■■■□□ 2.66
IRF3-220ENST00000598108 LMO7Q8WWI1 1683 aa31.69■■■□□ 2.66
IRF3-220ENST00000598108 NFAT5O94916 1531 aa31.69■■■□□ 2.66
IRF3-220ENST00000598108 OVOS2A0A0J9YW53 1432 aa31.67■■■□□ 2.66
IRF3-220ENST00000598108 OVOS2Q6IE36 1432 aa31.67■■■□□ 2.66
IRF3-220ENST00000598108 FYB1O15117 783 aa31.67■■■□□ 2.66
IRF3-220ENST00000598108 USP35Q9P2H5 1018 aa31.66■■■□□ 2.66
IRF3-220ENST00000598108 COL5A2P05997 1499 aaPredicted RBP31.65■■■□□ 2.66
IRF3-220ENST00000598108 COG3Q96JB2 828 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms