RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 TOPAZ1Q8N9V7 1692 aa25.49■■□□□ 1.67
CAPN12-207ENST00000597716 PLEKHF1Q96S99 279 aa25.49■■□□□ 1.67
CAPN12-207ENST00000597716 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
CAPN12-207ENST00000597716 DIP2AQ14689 1571 aa25.48■■□□□ 1.67
CAPN12-207ENST00000597716 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
CAPN12-207ENST00000597716 CCDC61Q9Y6R9 512 aa25.48■■□□□ 1.67
CAPN12-207ENST00000597716 NUDT16Q96DE0 195 aaKnown RBP25.47■■□□□ 1.67
CAPN12-207ENST00000597716 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
CAPN12-207ENST00000597716 TCERG1O14776 1098 aaKnown RBP25.46■■□□□ 1.67
CAPN12-207ENST00000597716 LTKP29376 864 aa25.46■■□□□ 1.67
CAPN12-207ENST00000597716 PNNQ9H307 717 aaKnown RBP25.46■■□□□ 1.67
CAPN12-207ENST00000597716 MAP2P11137 1827 aaKnown RBP25.46■■□□□ 1.67
CAPN12-207ENST00000597716 DIAPH1O60610 1272 aaKnown RBP25.45■■□□□ 1.67
CAPN12-207ENST00000597716 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.66
CAPN12-207ENST00000597716 NEUROD2Q15784 382 aa25.45■■□□□ 1.66
CAPN12-207ENST00000597716 MYH16Q9H6N6 1097 aa25.44■■□□□ 1.66
CAPN12-207ENST00000597716 EID1Q9Y6B2 187 aa25.44■■□□□ 1.66
CAPN12-207ENST00000597716 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
CAPN12-207ENST00000597716 NRKQ7Z2Y5 1582 aa25.43■■□□□ 1.66
CAPN12-207ENST00000597716 PDE3AQ14432 1141 aa25.43■■□□□ 1.66
CAPN12-207ENST00000597716 KDM2BQ8NHM5 1336 aa25.43■■□□□ 1.66
CAPN12-207ENST00000597716 U2SURPO15042 1029 aaKnown RBP25.42■■□□□ 1.66
CAPN12-207ENST00000597716 BCAR3O75815 825 aa25.42■■□□□ 1.66
CAPN12-207ENST00000597716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.42■■□□□ 1.66
CAPN12-207ENST00000597716 MS4A1P11836 297 aa25.41■■□□□ 1.66
CAPN12-207ENST00000597716 CEBPAP49715 358 aaPredicted RBP25.41■■□□□ 1.66
CAPN12-207ENST00000597716 PTCH1Q13635 1447 aa25.41■■□□□ 1.66
CAPN12-207ENST00000597716 ZNF692Q9BU19 519 aaPredicted RBP25.41■■□□□ 1.66
CAPN12-207ENST00000597716 MAPK8IP3Q9UPT6 1336 aa25.41■■□□□ 1.66
CAPN12-207ENST00000597716 POLKQ9UBT6 870 aa25.41■■□□□ 1.66
CAPN12-207ENST00000597716 LRRC7Q96NW7 1537 aa25.4■■□□□ 1.66
CAPN12-207ENST00000597716 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
CAPN12-207ENST00000597716 PTPRUQ92729 1446 aa25.4■■□□□ 1.66
CAPN12-207ENST00000597716 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.66
CAPN12-207ENST00000597716 CENPQQ7L2Z9 268 aaPredicted RBP25.39■■□□□ 1.66
CAPN12-207ENST00000597716 PRR36Q9H6K5 1346 aa25.39■■□□□ 1.65
CAPN12-207ENST00000597716 CT47B1P0C2W7 299 aaPredicted RBP25.39■■□□□ 1.65
CAPN12-207ENST00000597716 IL16Q14005 1332 aa25.38■■□□□ 1.65
CAPN12-207ENST00000597716 FCHSD2O94868 740 aa25.37■■□□□ 1.65
CAPN12-207ENST00000597716 RARSP54136 660 aaKnown RBP25.37■■□□□ 1.65
CAPN12-207ENST00000597716 TBX22Q9Y458 520 aa25.37■■□□□ 1.65
CAPN12-207ENST00000597716 NME9Q86XW9 330 aa25.35■■□□□ 1.65
CAPN12-207ENST00000597716 THEMISQ8N1K5 641 aaPredicted RBP25.35■■□□□ 1.65
CAPN12-207ENST00000597716 XRN1Q8IZH2 1706 aaKnown RBP25.35■■□□□ 1.65
CAPN12-207ENST00000597716 TRIM35Q9UPQ4 493 aa25.34■■□□□ 1.65
CAPN12-207ENST00000597716 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.65
CAPN12-207ENST00000597716 PLEKHG3A1L390 1219 aa25.33■■□□□ 1.65
CAPN12-207ENST00000597716 COG3Q96JB2 828 aa25.33■■□□□ 1.65
CAPN12-207ENST00000597716 AAMPQ13685 434 aa25.32■■□□□ 1.64
CAPN12-207ENST00000597716 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
CAPN12-207ENST00000597716 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
CAPN12-207ENST00000597716 CEP170BQ9Y4F5 1589 aaPredicted RBP25.31■■□□□ 1.64
CAPN12-207ENST00000597716 NCKAP5LQ9HCH0 1330 aa25.3■■□□□ 1.64
CAPN12-207ENST00000597716 KDM4FA0A1W2PPD8 638 aa25.3■■□□□ 1.64
CAPN12-207ENST00000597716 MSH5O43196 834 aa25.3■■□□□ 1.64
CAPN12-207ENST00000597716 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
CAPN12-207ENST00000597716 USP6P35125 1406 aa25.29■■□□□ 1.64
CAPN12-207ENST00000597716 SLC26A8Q96RN1 970 aa25.28■■□□□ 1.64
CAPN12-207ENST00000597716 OVOS2A0A0J9YW53 1432 aa25.28■■□□□ 1.64
CAPN12-207ENST00000597716 OVOS2Q6IE36 1432 aa25.28■■□□□ 1.64
CAPN12-207ENST00000597716 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
CAPN12-207ENST00000597716 IL13P35225 146 aa25.27■■□□□ 1.64
CAPN12-207ENST00000597716 RIPK4P57078 832 aa25.27■■□□□ 1.64
CAPN12-207ENST00000597716 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
CAPN12-207ENST00000597716 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
CAPN12-207ENST00000597716 PIK3R4Q99570 1358 aa25.27■■□□□ 1.64
CAPN12-207ENST00000597716 NEFMP07197 916 aa25.26■■□□□ 1.63
CAPN12-207ENST00000597716 TTC21BQ7Z4L5 1316 aa25.25■■□□□ 1.63
CAPN12-207ENST00000597716 MYT1Q01538 1121 aa25.25■■□□□ 1.63
CAPN12-207ENST00000597716 ZNF142P52746 1687 aaPredicted RBP25.25■■□□□ 1.63
CAPN12-207ENST00000597716 SSH2Q76I76 1423 aa25.25■■□□□ 1.63
CAPN12-207ENST00000597716 ACEP12821 1306 aa25.25■■□□□ 1.63
CAPN12-207ENST00000597716 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
CAPN12-207ENST00000597716 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
CAPN12-207ENST00000597716 ZRANB1Q9UGI0 708 aa25.24■■□□□ 1.63
CAPN12-207ENST00000597716 FBLN1P23142 703 aa25.24■■□□□ 1.63
CAPN12-207ENST00000597716 PDE4AP27815 886 aa25.23■■□□□ 1.63
CAPN12-207ENST00000597716 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
CAPN12-207ENST00000597716 CLUAP1Q96AJ1 413 aa25.22■■□□□ 1.63
CAPN12-207ENST00000597716 PANK1Q8TE04 598 aa25.21■■□□□ 1.63
CAPN12-207ENST00000597716 USP31Q70CQ4 1352 aa25.21■■□□□ 1.63
CAPN12-207ENST00000597716 NFE2L2Q16236 605 aa25.21■■□□□ 1.63
CAPN12-207ENST00000597716 FRAT1Q92837 279 aaPredicted RBP25.21■■□□□ 1.63
CAPN12-207ENST00000597716 TSR2Q969E8 191 aaKnown RBP25.21■■□□□ 1.63
CAPN12-207ENST00000597716 ANKARQ7Z5J8 1434 aa25.2■■□□□ 1.63
CAPN12-207ENST00000597716 ANP32AP39687 249 aaKnown RBP25.2■■□□□ 1.62
CAPN12-207ENST00000597716 COG6Q9Y2V7 657 aa25.2■■□□□ 1.62
CAPN12-207ENST00000597716 TTC21AQ8NDW8 1320 aa25.19■■□□□ 1.62
CAPN12-207ENST00000597716 EXOSC9Q06265 439 aaKnown RBP25.19■■□□□ 1.62
CAPN12-207ENST00000597716 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
CAPN12-207ENST00000597716 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
CAPN12-207ENST00000597716 ZKSCAN2Q63HK3 967 aa25.17■■□□□ 1.62
CAPN12-207ENST00000597716 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
CAPN12-207ENST00000597716 DLG5Q8TDM6 1919 aa25.16■■□□□ 1.62
CAPN12-207ENST00000597716 RRS1Q15050 365 aaKnown RBP25.16■■□□□ 1.62
CAPN12-207ENST00000597716 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
CAPN12-207ENST00000597716 RGPD1P0DJD0 1748 aa25.15■■□□□ 1.62
CAPN12-207ENST00000597716 ZNF428Q96B54 188 aa25.15■■□□□ 1.62
CAPN12-207ENST00000597716 PEAK1Q9H792 1746 aa25.14■■□□□ 1.62
CAPN12-207ENST00000597716 HMOX1P09601 288 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms