RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ROCK2O75116 1388 aaKnown RBP25.69■■□□□ 1.7
CHMP2A-203ENST00000597209 PAK3O75914 559 aaPredicted RBP25.69■■□□□ 1.7
CHMP2A-203ENST00000597209 NBPF8Q3BBV2 869 aa25.69■■□□□ 1.7
CHMP2A-203ENST00000597209 FAM83GA6ND36 823 aa25.68■■□□□ 1.7
CHMP2A-203ENST00000597209 PLEKHG5O94827 1062 aa25.68■■□□□ 1.7
CHMP2A-203ENST00000597209 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
CHMP2A-203ENST00000597209 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
CHMP2A-203ENST00000597209 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
CHMP2A-203ENST00000597209 VPS72Q15906 364 aa25.67■■□□□ 1.7
CHMP2A-203ENST00000597209 GLI3P10071 1580 aa25.66■■□□□ 1.7
CHMP2A-203ENST00000597209 ATAD2Q6PL18 1390 aa25.66■■□□□ 1.7
CHMP2A-203ENST00000597209 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
CHMP2A-203ENST00000597209 CABP2Q9NPB3 220 aa25.64■■□□□ 1.7
CHMP2A-203ENST00000597209 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.69
CHMP2A-203ENST00000597209 BRD4O60885 1362 aaPredicted RBP25.63■■□□□ 1.69
CHMP2A-203ENST00000597209 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
CHMP2A-203ENST00000597209 TONSLQ96HA7 1378 aa25.6■■□□□ 1.69
CHMP2A-203ENST00000597209 ONECUT3O60422 494 aaPredicted RBP25.6■■□□□ 1.69
CHMP2A-203ENST00000597209 NRAPQ86VF7 1730 aa25.6■■□□□ 1.69
CHMP2A-203ENST00000597209 BTG4Q9NY30 223 aa25.59■■□□□ 1.69
CHMP2A-203ENST00000597209 PHRF1Q9P1Y6 1649 aaKnown RBP25.59■■□□□ 1.69
CHMP2A-203ENST00000597209 CABP1Q9NZU7 370 aa25.57■■□□□ 1.68
CHMP2A-203ENST00000597209 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
CHMP2A-203ENST00000597209 PRDM11Q9NQV5 511 aa25.55■■□□□ 1.68
CHMP2A-203ENST00000597209 CCDC9Q9Y3X0 531 aaKnown RBP25.55■■□□□ 1.68
CHMP2A-203ENST00000597209 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
CHMP2A-203ENST00000597209 SEPT12Q8IYM1 358 aa25.54■■□□□ 1.68
CHMP2A-203ENST00000597209 CARD11Q9BXL7 1154 aa25.54■■□□□ 1.68
CHMP2A-203ENST00000597209 USP19O94966 1318 aa25.54■■□□□ 1.68
CHMP2A-203ENST00000597209 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
CHMP2A-203ENST00000597209 NUTM2GQ5VZR2 741 aa25.53■■□□□ 1.68
CHMP2A-203ENST00000597209 CCDC125Q86Z20 511 aa25.53■■□□□ 1.68
CHMP2A-203ENST00000597209 USP6P35125 1406 aa25.53■■□□□ 1.68
CHMP2A-203ENST00000597209 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
CHMP2A-203ENST00000597209 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
CHMP2A-203ENST00000597209 SSH2Q76I76 1423 aa25.5■■□□□ 1.67
CHMP2A-203ENST00000597209 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
CHMP2A-203ENST00000597209 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
CHMP2A-203ENST00000597209 CPDO75976 1380 aa25.49■■□□□ 1.67
CHMP2A-203ENST00000597209 SPATA31A5Q5VU36 1347 aa25.49■■□□□ 1.67
CHMP2A-203ENST00000597209 SPATA31A7Q8IWB4 1347 aa25.49■■□□□ 1.67
CHMP2A-203ENST00000597209 ZC3H6P61129 1189 aaKnown RBP25.49■■□□□ 1.67
CHMP2A-203ENST00000597209 GCP02774 474 aa25.46■■□□□ 1.67
CHMP2A-203ENST00000597209 CHRNA2Q15822 529 aa25.46■■□□□ 1.67
CHMP2A-203ENST00000597209 AKAP12Q02952 1782 aa25.44■■□□□ 1.66
CHMP2A-203ENST00000597209 FAM98CQ17RN3 349 aaKnown RBP25.44■■□□□ 1.66
CHMP2A-203ENST00000597209 KRT27Q7Z3Y8 459 aa25.44■■□□□ 1.66
CHMP2A-203ENST00000597209 CPSF1Q10570 1443 aaKnown RBP25.44■■□□□ 1.66
CHMP2A-203ENST00000597209 SPATA31A1Q5TZJ5 1347 aa25.42■■□□□ 1.66
CHMP2A-203ENST00000597209 NLRP6P59044 892 aa25.42■■□□□ 1.66
CHMP2A-203ENST00000597209 SLIT3O75094 1523 aa25.42■■□□□ 1.66
CHMP2A-203ENST00000597209 LMO7Q8WWI1 1683 aa25.42■■□□□ 1.66
CHMP2A-203ENST00000597209 BLMP54132 1417 aaPredicted RBP25.41■■□□□ 1.66
CHMP2A-203ENST00000597209 PUS7Q96PZ0 661 aaKnown RBP25.41■■□□□ 1.66
CHMP2A-203ENST00000597209 TTC21BQ7Z4L5 1316 aa25.4■■□□□ 1.66
CHMP2A-203ENST00000597209 PIK3C2AO00443 1686 aa25.4■■□□□ 1.66
CHMP2A-203ENST00000597209 CAMTA1Q9Y6Y1 1673 aa25.4■■□□□ 1.66
CHMP2A-203ENST00000597209 TTC21AQ8NDW8 1320 aa25.39■■□□□ 1.66
CHMP2A-203ENST00000597209 THSD7AQ9UPZ6 1657 aa25.39■■□□□ 1.66
CHMP2A-203ENST00000597209 STRN4Q9NRL3 753 aa25.39■■□□□ 1.66
CHMP2A-203ENST00000597209 A0A0G2JS52 829 aa25.38■■□□□ 1.65
CHMP2A-203ENST00000597209 EVA1CP58658 441 aa25.38■■□□□ 1.65
CHMP2A-203ENST00000597209 MYT1Q01538 1121 aa25.38■■□□□ 1.65
CHMP2A-203ENST00000597209 EP400Q96L91 3159 aa25.38■■□□□ 1.65
CHMP2A-203ENST00000597209 KTN1Q86UP2 1357 aaKnown RBP25.37■■□□□ 1.65
CHMP2A-203ENST00000597209 SLC24A1O60721 1099 aa25.36■■□□□ 1.65
CHMP2A-203ENST00000597209 MON2Q7Z3U7 1717 aa25.35■■□□□ 1.65
CHMP2A-203ENST00000597209 AATKQ6ZMQ8 1374 aa25.34■■□□□ 1.65
CHMP2A-203ENST00000597209 BARGINQ6ZT62 677 aa25.34■■□□□ 1.65
CHMP2A-203ENST00000597209 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
CHMP2A-203ENST00000597209 KCNH5Q8NCM2 988 aa25.33■■□□□ 1.65
CHMP2A-203ENST00000597209 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
CHMP2A-203ENST00000597209 CD163L1Q9NR16 1453 aa25.33■■□□□ 1.65
CHMP2A-203ENST00000597209 SF3B2Q13435 895 aaKnown RBP25.32■■□□□ 1.64
CHMP2A-203ENST00000597209 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
CHMP2A-203ENST00000597209 TESK2Q96S53 571 aa25.32■■□□□ 1.64
CHMP2A-203ENST00000597209 COL5A2P05997 1499 aaPredicted RBP25.32■■□□□ 1.64
CHMP2A-203ENST00000597209 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
CHMP2A-203ENST00000597209 THRAP3Q9Y2W1 955 aaKnown RBP25.31■■□□□ 1.64
CHMP2A-203ENST00000597209 TCP11L2Q8N4U5 519 aa25.3■■□□□ 1.64
CHMP2A-203ENST00000597209 COL18A1P39060 1754 aa25.29■■□□□ 1.64
CHMP2A-203ENST00000597209 HDGFL2Q7Z4V5 671 aaPredicted RBP25.29■■□□□ 1.64
CHMP2A-203ENST00000597209 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
CHMP2A-203ENST00000597209 USP31Q70CQ4 1352 aa25.29■■□□□ 1.64
CHMP2A-203ENST00000597209 ARHGEF25Q86VW2 580 aa25.28■■□□□ 1.64
CHMP2A-203ENST00000597209 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
CHMP2A-203ENST00000597209 USP54Q70EL1 1684 aa25.27■■□□□ 1.64
CHMP2A-203ENST00000597209 TERF2IPQ9NYB0 399 aa25.27■■□□□ 1.64
CHMP2A-203ENST00000597209 USP35Q9P2H5 1018 aa25.27■■□□□ 1.64
CHMP2A-203ENST00000597209 NINLQ9Y2I6 1382 aa25.27■■□□□ 1.64
CHMP2A-203ENST00000597209 CRB1P82279 1406 aa25.27■■□□□ 1.64
CHMP2A-203ENST00000597209 ZRANB1Q9UGI0 708 aa25.26■■□□□ 1.63
CHMP2A-203ENST00000597209 ZBTB7CA1YPR0 619 aa25.25■■□□□ 1.63
CHMP2A-203ENST00000597209 EDC4Q6P2E9 1401 aaKnown RBP25.25■■□□□ 1.63
CHMP2A-203ENST00000597209 NFAT5O94916 1531 aa25.25■■□□□ 1.63
CHMP2A-203ENST00000597209 DEFB132Q7Z7B7 95 aa25.24■■□□□ 1.63
CHMP2A-203ENST00000597209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.23■■□□□ 1.63
CHMP2A-203ENST00000597209 AXIN2Q9Y2T1 843 aa25.23■■□□□ 1.63
CHMP2A-203ENST00000597209 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
CHMP2A-203ENST00000597209 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms