RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 TRPM1Q7Z4N2 1603 aa30.83■■■□□ 2.53
C19orf54-205ENST00000596809 VPS72Q15906 364 aa30.79■■■□□ 2.52
C19orf54-205ENST00000596809 ABCA3Q99758 1704 aa30.78■■■□□ 2.52
C19orf54-205ENST00000596809 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.78■■■□□ 2.52
C19orf54-205ENST00000596809 RALGAPBQ86X10 1494 aa30.78■■■□□ 2.52
C19orf54-205ENST00000596809 TOPAZ1Q8N9V7 1692 aa30.78■■■□□ 2.52
C19orf54-205ENST00000596809 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
C19orf54-205ENST00000596809 TONSLQ96HA7 1378 aa30.77■■■□□ 2.52
C19orf54-205ENST00000596809 EVC2Q86UK5 1308 aa30.76■■■□□ 2.52
C19orf54-205ENST00000596809 QRICH2Q9H0J4 1663 aa30.76■■■□□ 2.51
C19orf54-205ENST00000596809 NUTM2GQ5VZR2 741 aa30.75■■■□□ 2.51
C19orf54-205ENST00000596809 CABP1Q9NZU7 370 aa30.75■■■□□ 2.51
C19orf54-205ENST00000596809 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
C19orf54-205ENST00000596809 BTG4Q9NY30 223 aa30.74■■■□□ 2.51
C19orf54-205ENST00000596809 CCDC9Q9Y3X0 531 aaKnown RBP30.74■■■□□ 2.51
C19orf54-205ENST00000596809 GLI3P10071 1580 aa30.72■■■□□ 2.51
C19orf54-205ENST00000596809 ABTB2Q8N961 1025 aa30.72■■■□□ 2.51
C19orf54-205ENST00000596809 PRDM11Q9NQV5 511 aa30.71■■■□□ 2.51
C19orf54-205ENST00000596809 PLCH1Q4KWH8 1693 aa30.71■■■□□ 2.51
C19orf54-205ENST00000596809 NWD2Q9ULI1 1742 aa30.7■■■□□ 2.51
C19orf54-205ENST00000596809 CARD11Q9BXL7 1154 aa30.7■■■□□ 2.51
C19orf54-205ENST00000596809 ONECUT3O60422 494 aaPredicted RBP30.67■■■□□ 2.5
C19orf54-205ENST00000596809 SEPT12Q8IYM1 358 aa30.67■■■□□ 2.5
C19orf54-205ENST00000596809 CRYBG1Q9Y4K1 1723 aa30.66■■■□□ 2.5
C19orf54-205ENST00000596809 BRD4O60885 1362 aaPredicted RBP30.66■■■□□ 2.5
C19orf54-205ENST00000596809 KIAA0232Q92628 1395 aa30.66■■■□□ 2.5
C19orf54-205ENST00000596809 COL14A1Q05707 1796 aaKnown RBP30.65■■■□□ 2.5
C19orf54-205ENST00000596809 ZC3H6P61129 1189 aaKnown RBP30.65■■■□□ 2.5
C19orf54-205ENST00000596809 NLRP13Q86W25 1043 aa30.64■■■□□ 2.5
C19orf54-205ENST00000596809 CHRNA2Q15822 529 aa30.63■■■□□ 2.49
C19orf54-205ENST00000596809 USP6P35125 1406 aa30.61■■■□□ 2.49
C19orf54-205ENST00000596809 USP19O94966 1318 aa30.6■■■□□ 2.49
C19orf54-205ENST00000596809 SBNO2Q9Y2G9 1366 aa30.58■■■□□ 2.49
C19orf54-205ENST00000596809 SPATA31A5Q5VU36 1347 aa30.58■■■□□ 2.49
C19orf54-205ENST00000596809 SPATA31A7Q8IWB4 1347 aa30.58■■■□□ 2.49
C19orf54-205ENST00000596809 GCP02774 474 aa30.58■■■□□ 2.49
C19orf54-205ENST00000596809 FAM98CQ17RN3 349 aaKnown RBP30.58■■■□□ 2.49
C19orf54-205ENST00000596809 ZNF692Q9BU19 519 aaPredicted RBP30.58■■■□□ 2.49
C19orf54-205ENST00000596809 NRAPQ86VF7 1730 aa30.58■■■□□ 2.49
C19orf54-205ENST00000596809 PHRF1Q9P1Y6 1649 aaKnown RBP30.58■■■□□ 2.49
C19orf54-205ENST00000596809 CCDC125Q86Z20 511 aa30.57■■■□□ 2.48
C19orf54-205ENST00000596809 A0A0G2JS52 829 aa30.56■■■□□ 2.48
C19orf54-205ENST00000596809 NLRP6P59044 892 aa30.56■■■□□ 2.48
C19orf54-205ENST00000596809 MYT1Q01538 1121 aa30.56■■■□□ 2.48
C19orf54-205ENST00000596809 STRN4Q9NRL3 753 aa30.55■■■□□ 2.48
C19orf54-205ENST00000596809 SSH2Q76I76 1423 aa30.55■■■□□ 2.48
C19orf54-205ENST00000596809 KRT27Q7Z3Y8 459 aa30.54■■■□□ 2.48
C19orf54-205ENST00000596809 CPDO75976 1380 aa30.54■■■□□ 2.48
C19orf54-205ENST00000596809 EVA1CP58658 441 aa30.52■■■□□ 2.48
C19orf54-205ENST00000596809 TTC21BQ7Z4L5 1316 aa30.5■■■□□ 2.47
C19orf54-205ENST00000596809 NRKQ7Z2Y5 1582 aa30.5■■■□□ 2.47
C19orf54-205ENST00000596809 SPATA31A1Q5TZJ5 1347 aa30.49■■■□□ 2.47
C19orf54-205ENST00000596809 CPSF1Q10570 1443 aaKnown RBP30.48■■■□□ 2.47
C19orf54-205ENST00000596809 BRWD3Q6RI45 1802 aa30.47■■■□□ 2.47
C19orf54-205ENST00000596809 KTN1Q86UP2 1357 aaKnown RBP30.46■■■□□ 2.47
C19orf54-205ENST00000596809 TTC21AQ8NDW8 1320 aa30.46■■■□□ 2.47
C19orf54-205ENST00000596809 PCGF6Q9BYE7 350 aa30.45■■■□□ 2.47
C19orf54-205ENST00000596809 BLMP54132 1417 aaPredicted RBP30.45■■■□□ 2.46
C19orf54-205ENST00000596809 CAMTA1Q9Y6Y1 1673 aa30.45■■■□□ 2.46
C19orf54-205ENST00000596809 ST20-MTHFSA0A0A6YYL1 179 aa30.44■■■□□ 2.46
C19orf54-205ENST00000596809 TMC1Q8TDI8 760 aa30.44■■■□□ 2.46
C19orf54-205ENST00000596809 ZBTB7CA1YPR0 619 aa30.43■■■□□ 2.46
C19orf54-205ENST00000596809 LARP1Q6PKG0 1096 aaKnown RBP30.43■■■□□ 2.46
C19orf54-205ENST00000596809 PUS7Q96PZ0 661 aaKnown RBP30.43■■■□□ 2.46
C19orf54-205ENST00000596809 USP35Q9P2H5 1018 aa30.43■■■□□ 2.46
C19orf54-205ENST00000596809 SLC12A5Q9H2X9 1139 aa30.42■■■□□ 2.46
C19orf54-205ENST00000596809 SLIT3O75094 1523 aa30.42■■■□□ 2.46
C19orf54-205ENST00000596809 TESK2Q96S53 571 aa30.41■■■□□ 2.46
C19orf54-205ENST00000596809 SF3B2Q13435 895 aaKnown RBP30.4■■■□□ 2.46
C19orf54-205ENST00000596809 PIK3C2AO00443 1686 aa30.39■■■□□ 2.46
C19orf54-205ENST00000596809 KCNH5Q8NCM2 988 aa30.39■■■□□ 2.46
C19orf54-205ENST00000596809 LMO7Q8WWI1 1683 aa30.39■■■□□ 2.45
C19orf54-205ENST00000596809 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.45
C19orf54-205ENST00000596809 SLC24A1O60721 1099 aa30.38■■■□□ 2.45
C19orf54-205ENST00000596809 BARGINQ6ZT62 677 aa30.38■■■□□ 2.45
C19orf54-205ENST00000596809 AKAP12Q02952 1782 aa30.38■■■□□ 2.45
C19orf54-205ENST00000596809 FAM182BQ5T319 152 aa30.37■■■□□ 2.45
C19orf54-205ENST00000596809 HDGFL2Q7Z4V5 671 aaPredicted RBP30.37■■■□□ 2.45
C19orf54-205ENST00000596809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.37■■■□□ 2.45
C19orf54-205ENST00000596809 TIMELESSQ9UNS1 1208 aa30.37■■■□□ 2.45
C19orf54-205ENST00000596809 TCP11L2Q8N4U5 519 aa30.36■■■□□ 2.45
C19orf54-205ENST00000596809 CLSPNQ9HAW4 1339 aa30.36■■■□□ 2.45
C19orf54-205ENST00000596809 CD163L1Q9NR16 1453 aa30.36■■■□□ 2.45
C19orf54-205ENST00000596809 DEFB132Q7Z7B7 95 aa30.35■■■□□ 2.45
C19orf54-205ENST00000596809 TERF2IPQ9NYB0 399 aa30.35■■■□□ 2.45
C19orf54-205ENST00000596809 THSD7AQ9UPZ6 1657 aa30.35■■■□□ 2.45
C19orf54-205ENST00000596809 COL5A2P05997 1499 aaPredicted RBP30.34■■■□□ 2.45
C19orf54-205ENST00000596809 SOX12O15370 315 aa30.34■■■□□ 2.45
C19orf54-205ENST00000596809 ARHGEF25Q86VW2 580 aa30.34■■■□□ 2.45
C19orf54-205ENST00000596809 EP400Q96L91 3159 aa30.34■■■□□ 2.45
C19orf54-205ENST00000596809 ZRANB1Q9UGI0 708 aa30.33■■■□□ 2.45
C19orf54-205ENST00000596809 THRAP3Q9Y2W1 955 aaKnown RBP30.33■■■□□ 2.45
C19orf54-205ENST00000596809 AXIN2Q9Y2T1 843 aa30.32■■■□□ 2.44
C19orf54-205ENST00000596809 NME9Q86XW9 330 aa30.31■■■□□ 2.44
C19orf54-205ENST00000596809 USP31Q70CQ4 1352 aa30.29■■■□□ 2.44
C19orf54-205ENST00000596809 CRB1P82279 1406 aa30.29■■■□□ 2.44
C19orf54-205ENST00000596809 USP47Q96K76 1375 aa30.28■■■□□ 2.44
C19orf54-205ENST00000596809 MON2Q7Z3U7 1717 aa30.28■■■□□ 2.44
C19orf54-205ENST00000596809 A0A1W2PP64 1363 aa30.28■■■□□ 2.44
C19orf54-205ENST00000596809 PDE3BQ13370 1112 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms