RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 TNNT2P45379 298 aaPredicted RBP25.12■■□□□ 1.61
GHDC-212ENST00000593209 CPSF1Q10570 1443 aaKnown RBP25.1■■□□□ 1.61
GHDC-212ENST00000593209 NCOA3Q9Y6Q9 1424 aa25.1■■□□□ 1.61
GHDC-212ENST00000593209 PDE3BQ13370 1112 aa25.09■■□□□ 1.61
GHDC-212ENST00000593209 C19orf44Q9H6X5 657 aa25.09■■□□□ 1.61
GHDC-212ENST00000593209 PPIP5K1Q6PFW1 1433 aa25.09■■□□□ 1.61
GHDC-212ENST00000593209 RGPD8O14715 1765 aaPredicted RBP25.09■■□□□ 1.61
GHDC-212ENST00000593209 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.61
GHDC-212ENST00000593209 CDCA7LQ96GN5 454 aa25.08■■□□□ 1.61
GHDC-212ENST00000593209 COL3A1P02461 1466 aaPredicted RBP25.07■■□□□ 1.6
GHDC-212ENST00000593209 FYB1O15117 783 aa25.07■■□□□ 1.6
GHDC-212ENST00000593209 NUDT16Q96DE0 195 aaKnown RBP25.07■■□□□ 1.6
GHDC-212ENST00000593209 ZNF521Q96K83 1311 aa25.07■■□□□ 1.6
GHDC-212ENST00000593209 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
GHDC-212ENST00000593209 PIP4K2BP78356 416 aa25.07■■□□□ 1.6
GHDC-212ENST00000593209 HDGFL2Q7Z4V5 671 aaPredicted RBP25.07■■□□□ 1.6
GHDC-212ENST00000593209 FMN2Q9NZ56 1722 aa25.07■■□□□ 1.6
GHDC-212ENST00000593209 ATF3P18847 181 aa25.06■■□□□ 1.6
GHDC-212ENST00000593209 NRKQ7Z2Y5 1582 aa25.06■■□□□ 1.6
GHDC-212ENST00000593209 GGNBP2Q9H3C7 697 aa25.06■■□□□ 1.6
GHDC-212ENST00000593209 MTHFSP49914 203 aa25.05■■□□□ 1.6
GHDC-212ENST00000593209 CCDC146Q8IYE0 955 aa25.05■■□□□ 1.6
GHDC-212ENST00000593209 TOM1O60784 492 aa25.05■■□□□ 1.6
GHDC-212ENST00000593209 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
GHDC-212ENST00000593209 EDC4Q6P2E9 1401 aaKnown RBP25.02■■□□□ 1.6
GHDC-212ENST00000593209 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
GHDC-212ENST00000593209 ERICH6BQ5W0A0 696 aa25■■□□□ 1.59
GHDC-212ENST00000593209 MAP2P11137 1827 aaKnown RBP25■■□□□ 1.59
GHDC-212ENST00000593209 DCCP43146 1447 aa25■■□□□ 1.59
GHDC-212ENST00000593209 SLAIN2Q9P270 581 aa25■■□□□ 1.59
GHDC-212ENST00000593209 MST1RQ04912 1400 aa24.98■■□□□ 1.59
GHDC-212ENST00000593209 APAF1O14727 1248 aa24.97■■□□□ 1.59
GHDC-212ENST00000593209 FBXO41Q8TF61 875 aa24.97■■□□□ 1.59
GHDC-212ENST00000593209 ANKARQ7Z5J8 1434 aa24.97■■□□□ 1.59
GHDC-212ENST00000593209 ROBO1Q9Y6N7 1651 aa24.95■■□□□ 1.58
GHDC-212ENST00000593209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
GHDC-212ENST00000593209 CFAP53Q96M91 514 aa24.94■■□□□ 1.58
GHDC-212ENST00000593209 PLEKHG3A1L390 1219 aa24.93■■□□□ 1.58
GHDC-212ENST00000593209 RCAN3Q9UKA8 241 aa24.93■■□□□ 1.58
GHDC-212ENST00000593209 C1orf167Q5SNV9 1468 aa24.92■■□□□ 1.58
GHDC-212ENST00000593209 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
GHDC-212ENST00000593209 DUSP27Q5VZP5 1158 aa24.91■■□□□ 1.58
GHDC-212ENST00000593209 PMFBP1Q8TBY8 1022 aa24.91■■□□□ 1.58
GHDC-212ENST00000593209 ORAI2Q96SN7 254 aa24.91■■□□□ 1.58
GHDC-212ENST00000593209 ACEP12821 1306 aa24.89■■□□□ 1.58
GHDC-212ENST00000593209 NME9Q86XW9 330 aa24.89■■□□□ 1.58
GHDC-212ENST00000593209 PPP4R2Q9NY27 417 aa24.89■■□□□ 1.58
GHDC-212ENST00000593209 RRP1P56182 461 aaKnown RBP24.89■■□□□ 1.57
GHDC-212ENST00000593209 GOLGA2Q08379 1002 aa24.88■■□□□ 1.57
GHDC-212ENST00000593209 ESCO1Q5FWF5 840 aa24.88■■□□□ 1.57
GHDC-212ENST00000593209 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
GHDC-212ENST00000593209 TRMT2AQ8IZ69 625 aaKnown RBP24.88■■□□□ 1.57
GHDC-212ENST00000593209 RUNDC1Q96C34 613 aa24.88■■□□□ 1.57
GHDC-212ENST00000593209 ZRANB1Q9UGI0 708 aa24.88■■□□□ 1.57
GHDC-212ENST00000593209 MYT1Q01538 1121 aa24.87■■□□□ 1.57
GHDC-212ENST00000593209 SLFN5Q08AF3 891 aa24.87■■□□□ 1.57
GHDC-212ENST00000593209 ILDR1Q86SU0 546 aaPredicted RBP24.87■■□□□ 1.57
GHDC-212ENST00000593209 SPINK5Q9NQ38 1064 aaPredicted RBP24.87■■□□□ 1.57
GHDC-212ENST00000593209 NGEFQ8N5V2 710 aa24.86■■□□□ 1.57
GHDC-212ENST00000593209 DDX17Q92841 729 aaKnown RBP24.86■■□□□ 1.57
GHDC-212ENST00000593209 USP6P35125 1406 aa24.85■■□□□ 1.57
GHDC-212ENST00000593209 FBLN1P23142 703 aa24.84■■□□□ 1.57
GHDC-212ENST00000593209 ZNF692Q9BU19 519 aaPredicted RBP24.84■■□□□ 1.57
GHDC-212ENST00000593209 PHF8Q9UPP1 1060 aa24.84■■□□□ 1.57
GHDC-212ENST00000593209 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
GHDC-212ENST00000593209 SSH2Q76I76 1423 aa24.83■■□□□ 1.57
GHDC-212ENST00000593209 NGDNQ8NEJ9 315 aaKnown RBP24.83■■□□□ 1.57
GHDC-212ENST00000593209 POLKQ9UBT6 870 aa24.83■■□□□ 1.57
GHDC-212ENST00000593209 CDK12Q9NYV4 1490 aaPredicted RBP24.82■■□□□ 1.56
GHDC-212ENST00000593209 AATKQ6ZMQ8 1374 aa24.82■■□□□ 1.56
GHDC-212ENST00000593209 TCP11L2Q8N4U5 519 aa24.82■■□□□ 1.56
GHDC-212ENST00000593209 OVOS2A0A0J9YW53 1432 aa24.81■■□□□ 1.56
GHDC-212ENST00000593209 OVOS2Q6IE36 1432 aa24.81■■□□□ 1.56
GHDC-212ENST00000593209 U2AF1L5P0DN76 240 aaPredicted RBP24.81■■□□□ 1.56
GHDC-212ENST00000593209 HSPA1LP34931 641 aa24.81■■□□□ 1.56
GHDC-212ENST00000593209 U2AF1Q01081 240 aaKnown RBP eCLIP24.81■■□□□ 1.56
GHDC-212ENST00000593209 WWC1Q8IX03 1113 aa24.81■■□□□ 1.56
GHDC-212ENST00000593209 TTC21BQ7Z4L5 1316 aa24.79■■□□□ 1.56
GHDC-212ENST00000593209 PHLPP1O60346 1717 aa24.79■■□□□ 1.56
GHDC-212ENST00000593209 MARF1Q9Y4F3 1742 aaKnown RBP24.79■■□□□ 1.56
GHDC-212ENST00000593209 PLEKHF1Q96S99 279 aa24.79■■□□□ 1.56
GHDC-212ENST00000593209 RRP7AQ9Y3A4 280 aaKnown RBP24.79■■□□□ 1.56
GHDC-212ENST00000593209 PIK3C2AO00443 1686 aa24.78■■□□□ 1.56
GHDC-212ENST00000593209 FOXO3O43524 673 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 XPCQ01831 940 aaPredicted RBP24.77■■□□□ 1.56
GHDC-212ENST00000593209 NHSL1Q5SYE7 1610 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 PEAK1Q9H792 1746 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 B4GALNT3Q6L9W6 998 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 KIF1AQ12756 1690 aa24.77■■□□□ 1.56
GHDC-212ENST00000593209 DIAPH1O60610 1272 aaKnown RBP24.76■■□□□ 1.55
GHDC-212ENST00000593209 E9PSI1 815 aa24.75■■□□□ 1.55
GHDC-212ENST00000593209 USP54Q70EL1 1684 aa24.75■■□□□ 1.55
GHDC-212ENST00000593209 U2SURPO15042 1029 aaKnown RBP24.75■■□□□ 1.55
GHDC-212ENST00000593209 COG3Q96JB2 828 aa24.75■■□□□ 1.55
GHDC-212ENST00000593209 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
GHDC-212ENST00000593209 NCBP3Q53F19 620 aaKnown RBP24.74■■□□□ 1.55
GHDC-212ENST00000593209 AHDC1Q5TGY3 1603 aaPredicted RBP24.73■■□□□ 1.55
GHDC-212ENST00000593209 NEUROD2Q15784 382 aa24.72■■□□□ 1.55
GHDC-212ENST00000593209 COL16A1Q07092 1604 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms