RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-221ENST00000593026 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-221ENST00000593026 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
DDX39A-221ENST00000593026 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
DDX39A-221ENST00000593026 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
DDX39A-221ENST00000593026 TERF2IPQ9NYB0 399 aa20.77■□□□□ 0.92
DDX39A-221ENST00000593026 MON2Q7Z3U7 1717 aa20.76■□□□□ 0.91
DDX39A-221ENST00000593026 MYOM1P52179 1685 aa20.76■□□□□ 0.91
DDX39A-221ENST00000593026 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
DDX39A-221ENST00000593026 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-221ENST00000593026 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-221ENST00000593026 NRKQ7Z2Y5 1582 aa20.74■□□□□ 0.91
DDX39A-221ENST00000593026 NUTM2AQ8IVF1 878 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-221ENST00000593026 SSH2Q76I76 1423 aa20.73■□□□□ 0.91
DDX39A-221ENST00000593026 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-221ENST00000593026 ANKRD36BQ8N2N9 1353 aa20.72■□□□□ 0.91
DDX39A-221ENST00000593026 LRP6O75581 1613 aa20.72■□□□□ 0.91
DDX39A-221ENST00000593026 ABTB2Q8N961 1025 aa20.71■□□□□ 0.91
DDX39A-221ENST00000593026 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
DDX39A-221ENST00000593026 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
DDX39A-221ENST00000593026 PLEKHG5O94827 1062 aa20.7■□□□□ 0.9
DDX39A-221ENST00000593026 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
DDX39A-221ENST00000593026 TTC21AQ8NDW8 1320 aa20.7■□□□□ 0.9
DDX39A-221ENST00000593026 SOCS7O14512 581 aa20.69■□□□□ 0.9
DDX39A-221ENST00000593026 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-221ENST00000593026 MEX3CQ5U5Q3 659 aaKnown RBP20.69■□□□□ 0.9
DDX39A-221ENST00000593026 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
DDX39A-221ENST00000593026 PIK3C2AO00443 1686 aa20.68■□□□□ 0.9
DDX39A-221ENST00000593026 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
DDX39A-221ENST00000593026 CABLES1Q8TDN4 633 aa20.68■□□□□ 0.9
DDX39A-221ENST00000593026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.67■□□□□ 0.9
DDX39A-221ENST00000593026 CRYBG1Q9Y4K1 1723 aa20.67■□□□□ 0.9
DDX39A-221ENST00000593026 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
DDX39A-221ENST00000593026 CCDC7Q96M83 1385 aa20.65■□□□□ 0.9
DDX39A-221ENST00000593026 ADAMTS2O95450 1211 aa20.65■□□□□ 0.9
DDX39A-221ENST00000593026 NLRP6P59044 892 aa20.65■□□□□ 0.9
DDX39A-221ENST00000593026 PHRF1Q9P1Y6 1649 aaKnown RBP20.64■□□□□ 0.9
DDX39A-221ENST00000593026 USP19O94966 1318 aa20.63■□□□□ 0.89
DDX39A-221ENST00000593026 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
DDX39A-221ENST00000593026 MARF1Q9Y4F3 1742 aaKnown RBP20.63■□□□□ 0.89
DDX39A-221ENST00000593026 NME9Q86XW9 330 aa20.62■□□□□ 0.89
DDX39A-221ENST00000593026 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
DDX39A-221ENST00000593026 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
DDX39A-221ENST00000593026 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
DDX39A-221ENST00000593026 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
DDX39A-221ENST00000593026 SLIT3O75094 1523 aa20.59■□□□□ 0.89
DDX39A-221ENST00000593026 USP54Q70EL1 1684 aa20.59■□□□□ 0.89
DDX39A-221ENST00000593026 PANK3Q9H999 370 aa20.59■□□□□ 0.89
DDX39A-221ENST00000593026 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-221ENST00000593026 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
DDX39A-221ENST00000593026 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
DDX39A-221ENST00000593026 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
DDX39A-221ENST00000593026 OVOS2A0A0J9YW53 1432 aa20.57■□□□□ 0.88
DDX39A-221ENST00000593026 GCP02774 474 aa20.57■□□□□ 0.88
DDX39A-221ENST00000593026 OVOS2Q6IE36 1432 aa20.57■□□□□ 0.88
DDX39A-221ENST00000593026 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
DDX39A-221ENST00000593026 KCNH5Q8NCM2 988 aa20.55■□□□□ 0.88
DDX39A-221ENST00000593026 AFF2P51816 1311 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 FYB1O15117 783 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 COG3Q96JB2 828 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 PRDM11Q9NQV5 511 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 KIAA0232Q92628 1395 aa20.54■□□□□ 0.88
DDX39A-221ENST00000593026 SOX12O15370 315 aa20.53■□□□□ 0.88
DDX39A-221ENST00000593026 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
DDX39A-221ENST00000593026 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
DDX39A-221ENST00000593026 CPDO75976 1380 aa20.52■□□□□ 0.88
DDX39A-221ENST00000593026 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
DDX39A-221ENST00000593026 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
DDX39A-221ENST00000593026 NFAT5O94916 1531 aa20.52■□□□□ 0.87
DDX39A-221ENST00000593026 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-221ENST00000593026 SLIT2O94813 1529 aa20.51■□□□□ 0.87
DDX39A-221ENST00000593026 POTEAQ6S8J7 498 aa20.5■□□□□ 0.87
DDX39A-221ENST00000593026 USP21Q9UK80 565 aa20.5■□□□□ 0.87
DDX39A-221ENST00000593026 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
DDX39A-221ENST00000593026 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
DDX39A-221ENST00000593026 ZBTB7CA1YPR0 619 aa20.49■□□□□ 0.87
DDX39A-221ENST00000593026 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
DDX39A-221ENST00000593026 BCL9LQ86UU0 1499 aa20.47■□□□□ 0.87
DDX39A-221ENST00000593026 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
DDX39A-221ENST00000593026 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
DDX39A-221ENST00000593026 NSD2O96028 1365 aa20.46■□□□□ 0.87
DDX39A-221ENST00000593026 ARHGEF25Q86VW2 580 aa20.46■□□□□ 0.87
DDX39A-221ENST00000593026 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
DDX39A-221ENST00000593026 LMO7Q8WWI1 1683 aa20.45■□□□□ 0.86
DDX39A-221ENST00000593026 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
DDX39A-221ENST00000593026 LTN1O94822 1766 aa20.44■□□□□ 0.86
DDX39A-221ENST00000593026 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-221ENST00000593026 UNC5CLQ8IV45 518 aa20.44■□□□□ 0.86
DDX39A-221ENST00000593026 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
DDX39A-221ENST00000593026 TRPC5Q9UL62 973 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-221ENST00000593026 ABCC6O95255 1503 aa20.43■□□□□ 0.86
DDX39A-221ENST00000593026 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
DDX39A-221ENST00000593026 COL18A1P39060 1754 aa20.42■□□□□ 0.86
DDX39A-221ENST00000593026 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-221ENST00000593026 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
DDX39A-221ENST00000593026 ATRNO75882 1429 aa20.42■□□□□ 0.86
DDX39A-221ENST00000593026 FBLN1P23142 703 aa20.4■□□□□ 0.86
DDX39A-221ENST00000593026 MAP3K19Q56UN5 1328 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms