RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 POLR3AO14802 1390 aaPredicted RBP33.54■■■□□ 2.96
MBD3-211ENST00000592965 CCDC61Q9Y6R9 512 aa33.53■■■□□ 2.96
MBD3-211ENST00000592965 NRAPQ86VF7 1730 aa33.53■■■□□ 2.96
MBD3-211ENST00000592965 COL14A1Q05707 1796 aaKnown RBP33.52■■■□□ 2.96
MBD3-211ENST00000592965 VPS72Q15906 364 aa33.51■■■□□ 2.95
MBD3-211ENST00000592965 FAM83GA6ND36 823 aa33.5■■■□□ 2.95
MBD3-211ENST00000592965 PLEKHG3A1L390 1219 aa33.49■■■□□ 2.95
MBD3-211ENST00000592965 PAK3O75914 559 aaPredicted RBP33.49■■■□□ 2.95
MBD3-211ENST00000592965 NEUROD1Q13562 356 aa33.47■■■□□ 2.95
MBD3-211ENST00000592965 ACEP12821 1306 aa33.47■■■□□ 2.95
MBD3-211ENST00000592965 PHRF1Q9P1Y6 1649 aaKnown RBP33.46■■■□□ 2.95
MBD3-211ENST00000592965 BRWD3Q6RI45 1802 aa33.46■■■□□ 2.95
MBD3-211ENST00000592965 NBPF8Q3BBV2 869 aa33.43■■■□□ 2.94
MBD3-211ENST00000592965 SRPK2P78362 688 aaKnown RBP33.42■■■□□ 2.94
MBD3-211ENST00000592965 PPIP5K1Q6PFW1 1433 aa33.42■■■□□ 2.94
MBD3-211ENST00000592965 ROCK2O75116 1388 aaKnown RBP33.41■■■□□ 2.94
MBD3-211ENST00000592965 BTG4Q9NY30 223 aa33.4■■■□□ 2.94
MBD3-211ENST00000592965 ONECUT3O60422 494 aaPredicted RBP33.38■■■□□ 2.93
MBD3-211ENST00000592965 CABP2Q9NPB3 220 aa33.38■■■□□ 2.93
MBD3-211ENST00000592965 CCDC9Q9Y3X0 531 aaKnown RBP33.38■■■□□ 2.93
MBD3-211ENST00000592965 SEPT12Q8IYM1 358 aa33.36■■■□□ 2.93
MBD3-211ENST00000592965 PRDM11Q9NQV5 511 aa33.36■■■□□ 2.93
MBD3-211ENST00000592965 CCDC125Q86Z20 511 aa33.34■■■□□ 2.93
MBD3-211ENST00000592965 NRKQ7Z2Y5 1582 aa33.34■■■□□ 2.93
MBD3-211ENST00000592965 BRD4O60885 1362 aaPredicted RBP33.34■■■□□ 2.93
MBD3-211ENST00000592965 KIAA0232Q92628 1395 aa33.34■■■□□ 2.93
MBD3-211ENST00000592965 EVC2Q86UK5 1308 aa33.31■■■□□ 2.92
MBD3-211ENST00000592965 NUTM2GQ5VZR2 741 aa33.3■■■□□ 2.92
MBD3-211ENST00000592965 USP19O94966 1318 aa33.29■■■□□ 2.92
MBD3-211ENST00000592965 ABTB2Q8N961 1025 aa33.29■■■□□ 2.92
MBD3-211ENST00000592965 USP6P35125 1406 aa33.28■■■□□ 2.92
MBD3-211ENST00000592965 SPATA31A5Q5VU36 1347 aa33.28■■■□□ 2.92
MBD3-211ENST00000592965 SPATA31A7Q8IWB4 1347 aa33.28■■■□□ 2.92
MBD3-211ENST00000592965 BLMP54132 1417 aaPredicted RBP33.27■■■□□ 2.92
MBD3-211ENST00000592965 CABP1Q9NZU7 370 aa33.26■■■□□ 2.91
MBD3-211ENST00000592965 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
MBD3-211ENST00000592965 THSD7AQ9UPZ6 1657 aa33.25■■■□□ 2.91
MBD3-211ENST00000592965 CPDO75976 1380 aa33.24■■■□□ 2.91
MBD3-211ENST00000592965 FAM98CQ17RN3 349 aaKnown RBP33.24■■■□□ 2.91
MBD3-211ENST00000592965 KRT27Q7Z3Y8 459 aa33.24■■■□□ 2.91
MBD3-211ENST00000592965 TONSLQ96HA7 1378 aa33.23■■■□□ 2.91
MBD3-211ENST00000592965 ZC3H6P61129 1189 aaKnown RBP33.23■■■□□ 2.91
MBD3-211ENST00000592965 CHRNA2Q15822 529 aa33.23■■■□□ 2.91
MBD3-211ENST00000592965 SBNO2Q9Y2G9 1366 aa33.22■■■□□ 2.91
MBD3-211ENST00000592965 NLRP13Q86W25 1043 aa33.22■■■□□ 2.91
MBD3-211ENST00000592965 LMO7Q8WWI1 1683 aa33.22■■■□□ 2.91
MBD3-211ENST00000592965 AKAP12Q02952 1782 aa33.21■■■□□ 2.91
MBD3-211ENST00000592965 SSH2Q76I76 1423 aa33.21■■■□□ 2.91
MBD3-211ENST00000592965 A0A0G2JS52 829 aa33.2■■■□□ 2.91
MBD3-211ENST00000592965 MYT1Q01538 1121 aa33.2■■■□□ 2.91
MBD3-211ENST00000592965 PIK3C2AO00443 1686 aa33.19■■■□□ 2.9
MBD3-211ENST00000592965 SPATA31A1Q5TZJ5 1347 aa33.17■■■□□ 2.9
MBD3-211ENST00000592965 SLIT3O75094 1523 aa33.17■■■□□ 2.9
MBD3-211ENST00000592965 CAMTA1Q9Y6Y1 1673 aa33.17■■■□□ 2.9
MBD3-211ENST00000592965 CARD11Q9BXL7 1154 aa33.16■■■□□ 2.9
MBD3-211ENST00000592965 GCP02774 474 aa33.15■■■□□ 2.9
MBD3-211ENST00000592965 STRN4Q9NRL3 753 aa33.14■■■□□ 2.9
MBD3-211ENST00000592965 ZNF692Q9BU19 519 aaPredicted RBP33.11■■■□□ 2.89
MBD3-211ENST00000592965 CPSF1Q10570 1443 aaKnown RBP33.11■■■□□ 2.89
MBD3-211ENST00000592965 NLRP6P59044 892 aa33.1■■■□□ 2.89
MBD3-211ENST00000592965 MON2Q7Z3U7 1717 aa33.1■■■□□ 2.89
MBD3-211ENST00000592965 SF3B2Q13435 895 aaKnown RBP33.09■■■□□ 2.89
MBD3-211ENST00000592965 SRCAPQ6ZRS2 3230 aa33.09■■■□□ 2.89
MBD3-211ENST00000592965 EVA1CP58658 441 aa33.08■■■□□ 2.89
MBD3-211ENST00000592965 COL5A2P05997 1499 aaPredicted RBP33.07■■■□□ 2.88
MBD3-211ENST00000592965 ZRANB1Q9UGI0 708 aa33.07■■■□□ 2.88
MBD3-211ENST00000592965 RGPD1P0DJD0 1748 aa33.07■■■□□ 2.88
MBD3-211ENST00000592965 TTC21BQ7Z4L5 1316 aa33.06■■■□□ 2.88
MBD3-211ENST00000592965 TTC21AQ8NDW8 1320 aa33.04■■■□□ 2.88
MBD3-211ENST00000592965 LARP1Q6PKG0 1096 aaKnown RBP33.04■■■□□ 2.88
MBD3-211ENST00000592965 BARGINQ6ZT62 677 aa33.04■■■□□ 2.88
MBD3-211ENST00000592965 DEFB132Q7Z7B7 95 aa33.04■■■□□ 2.88
MBD3-211ENST00000592965 AATKQ6ZMQ8 1374 aa33.04■■■□□ 2.88
MBD3-211ENST00000592965 COL18A1P39060 1754 aa33.03■■■□□ 2.88
MBD3-211ENST00000592965 KTN1Q86UP2 1357 aaKnown RBP33.02■■■□□ 2.88
MBD3-211ENST00000592965 USP35Q9P2H5 1018 aa33.01■■■□□ 2.87
MBD3-211ENST00000592965 TNS1Q9HBL0 1735 aaKnown RBP32.99■■■□□ 2.87
MBD3-211ENST00000592965 TCP11L2Q8N4U5 519 aa32.99■■■□□ 2.87
MBD3-211ENST00000592965 CD163L1Q9NR16 1453 aa32.99■■■□□ 2.87
MBD3-211ENST00000592965 USP54Q70EL1 1684 aa32.98■■■□□ 2.87
MBD3-211ENST00000592965 FAM182BQ5T319 152 aa32.98■■■□□ 2.87
MBD3-211ENST00000592965 CRB1P82279 1406 aa32.97■■■□□ 2.87
MBD3-211ENST00000592965 THRAP3Q9Y2W1 955 aaKnown RBP32.97■■■□□ 2.87
MBD3-211ENST00000592965 PARP4Q9UKK3 1724 aaKnown RBP32.97■■■□□ 2.87
MBD3-211ENST00000592965 BAG6P46379 1132 aa32.96■■■□□ 2.87
MBD3-211ENST00000592965 NFAT5O94916 1531 aa32.96■■■□□ 2.87
MBD3-211ENST00000592965 KCNH5Q8NCM2 988 aa32.95■■■□□ 2.87
MBD3-211ENST00000592965 ZBTB7CA1YPR0 619 aa32.94■■■□□ 2.86
MBD3-211ENST00000592965 PUS7Q96PZ0 661 aaKnown RBP32.94■■■□□ 2.86
MBD3-211ENST00000592965 DISP2A7MBM2 1401 aa32.94■■■□□ 2.86
MBD3-211ENST00000592965 FAM196AQ6ZSG2 479 aa32.92■■■□□ 2.86
MBD3-211ENST00000592965 ARHGEF25Q86VW2 580 aa32.92■■■□□ 2.86
MBD3-211ENST00000592965 USP31Q70CQ4 1352 aa32.91■■■□□ 2.86
MBD3-211ENST00000592965 ABCC6O95255 1503 aa32.91■■■□□ 2.86
MBD3-211ENST00000592965 RGPD5Q99666 1765 aa32.91■■■□□ 2.86
MBD3-211ENST00000592965 TESK2Q96S53 571 aa32.9■■■□□ 2.86
MBD3-211ENST00000592965 WNK3Q9BYP7 1800 aa32.89■■■□□ 2.86
MBD3-211ENST00000592965 TMC1Q8TDI8 760 aa32.89■■■□□ 2.86
MBD3-211ENST00000592965 PDE3BQ13370 1112 aa32.88■■■□□ 2.85
MBD3-211ENST00000592965 EDC4Q6P2E9 1401 aaKnown RBP32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms