RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 EDC4Q6P2E9 1401 aaKnown RBP18.65■□□□□ 0.58
RANBP3-229ENST00000592771 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
RANBP3-229ENST00000592771 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
RANBP3-229ENST00000592771 RUNDC1Q96C34 613 aa18.64■□□□□ 0.57
RANBP3-229ENST00000592771 TBX22Q9Y458 520 aa18.64■□□□□ 0.57
RANBP3-229ENST00000592771 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
RANBP3-229ENST00000592771 CEP170BQ9Y4F5 1589 aaPredicted RBP18.63■□□□□ 0.57
RANBP3-229ENST00000592771 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
RANBP3-229ENST00000592771 PNPLA6Q8IY17 1366 aa18.63■□□□□ 0.57
RANBP3-229ENST00000592771 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
RANBP3-229ENST00000592771 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
RANBP3-229ENST00000592771 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
RANBP3-229ENST00000592771 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
RANBP3-229ENST00000592771 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
RANBP3-229ENST00000592771 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
RANBP3-229ENST00000592771 E9PSI1 815 aa18.61■□□□□ 0.57
RANBP3-229ENST00000592771 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
RANBP3-229ENST00000592771 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
RANBP3-229ENST00000592771 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
RANBP3-229ENST00000592771 SLC26A8Q96RN1 970 aa18.59■□□□□ 0.57
RANBP3-229ENST00000592771 WWC1Q8IX03 1113 aa18.59■□□□□ 0.57
RANBP3-229ENST00000592771 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
RANBP3-229ENST00000592771 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
RANBP3-229ENST00000592771 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
RANBP3-229ENST00000592771 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
RANBP3-229ENST00000592771 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-229ENST00000592771 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
RANBP3-229ENST00000592771 NRKQ7Z2Y5 1582 aa18.57■□□□□ 0.56
RANBP3-229ENST00000592771 PDE4AP27815 886 aa18.57■□□□□ 0.56
RANBP3-229ENST00000592771 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
RANBP3-229ENST00000592771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
RANBP3-229ENST00000592771 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
RANBP3-229ENST00000592771 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
RANBP3-229ENST00000592771 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
RANBP3-229ENST00000592771 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
RANBP3-229ENST00000592771 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
RANBP3-229ENST00000592771 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
RANBP3-229ENST00000592771 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
RANBP3-229ENST00000592771 NCKAP5LQ9HCH0 1330 aa18.55■□□□□ 0.56
RANBP3-229ENST00000592771 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
RANBP3-229ENST00000592771 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
RANBP3-229ENST00000592771 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
RANBP3-229ENST00000592771 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
RANBP3-229ENST00000592771 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
RANBP3-229ENST00000592771 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
RANBP3-229ENST00000592771 NME9Q86XW9 330 aa18.52■□□□□ 0.56
RANBP3-229ENST00000592771 CRBNQ96SW2 442 aa18.52■□□□□ 0.56
RANBP3-229ENST00000592771 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.55
RANBP3-229ENST00000592771 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
RANBP3-229ENST00000592771 PLIN1O60240 522 aa18.51■□□□□ 0.55
RANBP3-229ENST00000592771 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
RANBP3-229ENST00000592771 DEKP35659 375 aaKnown RBP18.49■□□□□ 0.55
RANBP3-229ENST00000592771 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
RANBP3-229ENST00000592771 USP6P35125 1406 aa18.48■□□□□ 0.55
RANBP3-229ENST00000592771 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
RANBP3-229ENST00000592771 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
RANBP3-229ENST00000592771 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
RANBP3-229ENST00000592771 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 NALCNQ8IZF0 1738 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 ACEP12821 1306 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 OVOS2A0A0J9YW53 1432 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
RANBP3-229ENST00000592771 OVOS2Q6IE36 1432 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 COG3Q96JB2 828 aa18.47■□□□□ 0.55
RANBP3-229ENST00000592771 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
RANBP3-229ENST00000592771 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
RANBP3-229ENST00000592771 LRRC7Q96NW7 1537 aa18.46■□□□□ 0.55
RANBP3-229ENST00000592771 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
RANBP3-229ENST00000592771 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
RANBP3-229ENST00000592771 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
RANBP3-229ENST00000592771 USP35Q9P2H5 1018 aa18.45■□□□□ 0.54
RANBP3-229ENST00000592771 FCHSD2O94868 740 aa18.45■□□□□ 0.54
RANBP3-229ENST00000592771 FBLN1P23142 703 aa18.45■□□□□ 0.54
RANBP3-229ENST00000592771 TMPOP42166 694 aaKnown RBP18.45■□□□□ 0.54
RANBP3-229ENST00000592771 C20orf194Q5TEA3 1177 aa18.45■□□□□ 0.54
RANBP3-229ENST00000592771 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
RANBP3-229ENST00000592771 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
RANBP3-229ENST00000592771 EMILIN1Q9Y6C2 1016 aa18.44■□□□□ 0.54
RANBP3-229ENST00000592771 FMN2Q9NZ56 1722 aa18.44■□□□□ 0.54
RANBP3-229ENST00000592771 KCNA6P17658 529 aa18.43■□□□□ 0.54
RANBP3-229ENST00000592771 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
RANBP3-229ENST00000592771 IL13P35225 146 aa18.42■□□□□ 0.54
RANBP3-229ENST00000592771 NBR1Q14596 966 aa18.42■□□□□ 0.54
RANBP3-229ENST00000592771 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
RANBP3-229ENST00000592771 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
RANBP3-229ENST00000592771 IL16Q14005 1332 aa18.41■□□□□ 0.54
RANBP3-229ENST00000592771 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
RANBP3-229ENST00000592771 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
RANBP3-229ENST00000592771 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
RANBP3-229ENST00000592771 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
RANBP3-229ENST00000592771 BCAR3O75815 825 aa18.4■□□□□ 0.54
RANBP3-229ENST00000592771 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
RANBP3-229ENST00000592771 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
RANBP3-229ENST00000592771 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
RANBP3-229ENST00000592771 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
RANBP3-229ENST00000592771 HSPA2P54652 639 aa18.37■□□□□ 0.53
RANBP3-229ENST00000592771 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
RANBP3-229ENST00000592771 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
RANBP3-229ENST00000592771 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms