RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 MYT1Q01538 1121 aa30.53■■■□□ 2.48
R3HDM4-206ENST00000590454 PLCH1Q4KWH8 1693 aa30.51■■■□□ 2.47
R3HDM4-206ENST00000590454 LRP5O75197 1615 aa30.51■■■□□ 2.47
R3HDM4-206ENST00000590454 CARD11Q9BXL7 1154 aa30.5■■■□□ 2.47
R3HDM4-206ENST00000590454 POGKQ9P215 609 aa30.5■■■□□ 2.47
R3HDM4-206ENST00000590454 PSDA5PKW4 1024 aaPredicted RBP30.48■■■□□ 2.47
R3HDM4-206ENST00000590454 RGPD8O14715 1765 aaPredicted RBP30.47■■■□□ 2.47
R3HDM4-206ENST00000590454 FAM98CQ17RN3 349 aaKnown RBP30.47■■■□□ 2.47
R3HDM4-206ENST00000590454 PMFBP1Q8TBY8 1022 aa30.47■■■□□ 2.47
R3HDM4-206ENST00000590454 BTG4Q9NY30 223 aa30.45■■■□□ 2.47
R3HDM4-206ENST00000590454 ANKARQ7Z5J8 1434 aa30.43■■■□□ 2.46
R3HDM4-206ENST00000590454 MINK1Q8N4C8 1332 aaPredicted RBP30.43■■■□□ 2.46
R3HDM4-206ENST00000590454 ABCA3Q99758 1704 aa30.42■■■□□ 2.46
R3HDM4-206ENST00000590454 HIRIP3Q9BW71 556 aaPredicted RBP30.42■■■□□ 2.46
R3HDM4-206ENST00000590454 EN1Q05925 392 aaPredicted RBP30.4■■■□□ 2.46
R3HDM4-206ENST00000590454 CENPJQ9HC77 1338 aaPredicted RBP30.39■■■□□ 2.46
R3HDM4-206ENST00000590454 QRICH2Q9H0J4 1663 aa30.38■■■□□ 2.45
R3HDM4-206ENST00000590454 NRAPQ86VF7 1730 aa30.36■■■□□ 2.45
R3HDM4-206ENST00000590454 SPATA31A5Q5VU36 1347 aa30.35■■■□□ 2.45
R3HDM4-206ENST00000590454 SPATA31A7Q8IWB4 1347 aa30.35■■■□□ 2.45
R3HDM4-206ENST00000590454 ADGRB2O60241 1585 aa30.35■■■□□ 2.45
R3HDM4-206ENST00000590454 EIF3AQ14152 1382 aaKnown RBP30.33■■■□□ 2.45
R3HDM4-206ENST00000590454 FAM182BQ5T319 152 aa30.33■■■□□ 2.45
R3HDM4-206ENST00000590454 COL14A1Q05707 1796 aaKnown RBP30.32■■■□□ 2.44
R3HDM4-206ENST00000590454 USP47Q96K76 1375 aa30.31■■■□□ 2.44
R3HDM4-206ENST00000590454 R3HDM1Q15032 1099 aaKnown RBP30.31■■■□□ 2.44
R3HDM4-206ENST00000590454 TRPM3Q9HCF6 1732 aaPredicted RBP30.3■■■□□ 2.44
R3HDM4-206ENST00000590454 DISP2A7MBM2 1401 aa30.29■■■□□ 2.44
R3HDM4-206ENST00000590454 RGPD1P0DJD0 1748 aa30.28■■■□□ 2.44
R3HDM4-206ENST00000590454 ST20-MTHFSA0A0A6YYL1 179 aa30.28■■■□□ 2.44
R3HDM4-206ENST00000590454 WASLO00401 505 aaPredicted RBP30.28■■■□□ 2.44
R3HDM4-206ENST00000590454 PRR36Q9H6K5 1346 aa30.27■■■□□ 2.44
R3HDM4-206ENST00000590454 NGDNQ8NEJ9 315 aaKnown RBP30.27■■■□□ 2.44
R3HDM4-206ENST00000590454 PRDM11Q9NQV5 511 aa30.27■■■□□ 2.44
R3HDM4-206ENST00000590454 ALS2Q96Q42 1657 aa30.27■■■□□ 2.44
R3HDM4-206ENST00000590454 PAK3O75914 559 aaPredicted RBP30.26■■■□□ 2.43
R3HDM4-206ENST00000590454 TULP4Q9NRJ4 1543 aa30.26■■■□□ 2.43
R3HDM4-206ENST00000590454 EZH2Q15910 746 aaKnown RBP30.25■■■□□ 2.43
R3HDM4-206ENST00000590454 CDK19Q9BWU1 502 aa30.25■■■□□ 2.43
R3HDM4-206ENST00000590454 TESK2Q96S53 571 aa30.23■■■□□ 2.43
R3HDM4-206ENST00000590454 FAM196AQ6ZSG2 479 aa30.22■■■□□ 2.43
R3HDM4-206ENST00000590454 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
R3HDM4-206ENST00000590454 THSD7AQ9UPZ6 1657 aa30.21■■■□□ 2.43
R3HDM4-206ENST00000590454 CAMKK2Q96RR4 588 aa30.21■■■□□ 2.43
R3HDM4-206ENST00000590454 SBNO2Q9Y2G9 1366 aa30.19■■■□□ 2.42
R3HDM4-206ENST00000590454 TRIM37O94972 964 aa30.19■■■□□ 2.42
R3HDM4-206ENST00000590454 CABP2Q9NPB3 220 aa30.19■■■□□ 2.42
R3HDM4-206ENST00000590454 HSPA5P11021 654 aaKnown RBP30.18■■■□□ 2.42
R3HDM4-206ENST00000590454 KIAA0232Q92628 1395 aa30.16■■■□□ 2.42
R3HDM4-206ENST00000590454 STRN4Q9NRL3 753 aa30.16■■■□□ 2.42
R3HDM4-206ENST00000590454 ATP7BP35670 1465 aa30.16■■■□□ 2.42
R3HDM4-206ENST00000590454 TNS1Q9HBL0 1735 aaKnown RBP30.16■■■□□ 2.42
R3HDM4-206ENST00000590454 APBA3O96018 575 aa30.15■■■□□ 2.42
R3HDM4-206ENST00000590454 SRPK2P78362 688 aaKnown RBP30.15■■■□□ 2.42
R3HDM4-206ENST00000590454 CHRNA2Q15822 529 aa30.15■■■□□ 2.42
R3HDM4-206ENST00000590454 EVC2Q86UK5 1308 aa30.15■■■□□ 2.42
R3HDM4-206ENST00000590454 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
R3HDM4-206ENST00000590454 EIF4G2P78344 907 aaKnown RBP eCLIP30.14■■■□□ 2.42
R3HDM4-206ENST00000590454 NUDT16Q96DE0 195 aaKnown RBP30.14■■■□□ 2.42
R3HDM4-206ENST00000590454 CRYBG1Q9Y4K1 1723 aa30.13■■■□□ 2.41
R3HDM4-206ENST00000590454 ZC3H6P61129 1189 aaKnown RBP30.11■■■□□ 2.41
R3HDM4-206ENST00000590454 EVA1CP58658 441 aa30.1■■■□□ 2.41
R3HDM4-206ENST00000590454 PDE3BQ13370 1112 aa30.1■■■□□ 2.41
R3HDM4-206ENST00000590454 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
R3HDM4-206ENST00000590454 BARGINQ6ZT62 677 aa30.09■■■□□ 2.41
R3HDM4-206ENST00000590454 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
R3HDM4-206ENST00000590454 NBPF14Q5TI25 921 aa30.06■■■□□ 2.4
R3HDM4-206ENST00000590454 NUTM2GQ5VZR2 741 aa30.06■■■□□ 2.4
R3HDM4-206ENST00000590454 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
R3HDM4-206ENST00000590454 CCDC61Q9Y6R9 512 aa30.04■■■□□ 2.4
R3HDM4-206ENST00000590454 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
R3HDM4-206ENST00000590454 SSH2Q76I76 1423 aa30.03■■■□□ 2.4
R3HDM4-206ENST00000590454 TMF1P82094 1093 aa30.02■■■□□ 2.4
R3HDM4-206ENST00000590454 PPIP5K1Q6PFW1 1433 aa30.02■■■□□ 2.4
R3HDM4-206ENST00000590454 TCP11L2Q8N4U5 519 aa30.01■■■□□ 2.39
R3HDM4-206ENST00000590454 PHRF1Q9P1Y6 1649 aaKnown RBP30■■■□□ 2.39
R3HDM4-206ENST00000590454 LARP1Q6PKG0 1096 aaKnown RBP30■■■□□ 2.39
R3HDM4-206ENST00000590454 CABP1Q9NZU7 370 aa30■■■□□ 2.39
R3HDM4-206ENST00000590454 ACEP12821 1306 aa29.99■■■□□ 2.39
R3HDM4-206ENST00000590454 YY1P25490 414 aa29.99■■■□□ 2.39
R3HDM4-206ENST00000590454 POLR3AO14802 1390 aaPredicted RBP29.99■■■□□ 2.39
R3HDM4-206ENST00000590454 PLEKHG3A1L390 1219 aa29.97■■■□□ 2.39
R3HDM4-206ENST00000590454 C11orf95C9JLR9 678 aaPredicted RBP29.97■■■□□ 2.39
R3HDM4-206ENST00000590454 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
R3HDM4-206ENST00000590454 THRAP3Q9Y2W1 955 aaKnown RBP29.97■■■□□ 2.39
R3HDM4-206ENST00000590454 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
R3HDM4-206ENST00000590454 RREB1Q92766 1687 aa29.95■■■□□ 2.38
R3HDM4-206ENST00000590454 CAMTA1Q9Y6Y1 1673 aa29.95■■■□□ 2.38
R3HDM4-206ENST00000590454 CPDO75976 1380 aa29.94■■■□□ 2.38
R3HDM4-206ENST00000590454 PUS7Q96PZ0 661 aaKnown RBP29.94■■■□□ 2.38
R3HDM4-206ENST00000590454 SPON1Q9HCB6 807 aa29.94■■■□□ 2.38
R3HDM4-206ENST00000590454 PPP1R1BQ9UD71 204 aaPredicted RBP29.94■■■□□ 2.38
R3HDM4-206ENST00000590454 SLC12A5Q9H2X9 1139 aa29.92■■■□□ 2.38
R3HDM4-206ENST00000590454 DCAF8L1A6NGE4 600 aa29.91■■■□□ 2.38
R3HDM4-206ENST00000590454 KCNQ2O43526 872 aa29.91■■■□□ 2.38
R3HDM4-206ENST00000590454 TMC1Q8TDI8 760 aa29.91■■■□□ 2.38
R3HDM4-206ENST00000590454 NUP188Q5SRE5 1749 aa29.91■■■□□ 2.38
R3HDM4-206ENST00000590454 NLRP13Q86W25 1043 aa29.9■■■□□ 2.38
R3HDM4-206ENST00000590454 USP19O94966 1318 aa29.9■■■□□ 2.38
R3HDM4-206ENST00000590454 NRKQ7Z2Y5 1582 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms