RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 FNBP4Q8N3X1 1017 aaPredicted RBP25.99■■□□□ 1.75
LDLRAD4-215ENST00000590371 CABP1Q9NZU7 370 aa25.97■■□□□ 1.75
LDLRAD4-215ENST00000590371 TRPC5Q9UL62 973 aaPredicted RBP25.96■■□□□ 1.75
LDLRAD4-215ENST00000590371 TIMELESSQ9UNS1 1208 aa25.96■■□□□ 1.75
LDLRAD4-215ENST00000590371 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.75
LDLRAD4-215ENST00000590371 RBM6P78332 1123 aaKnown RBP25.95■■□□□ 1.74
LDLRAD4-215ENST00000590371 ATAD2Q6PL18 1390 aa25.93■■□□□ 1.74
LDLRAD4-215ENST00000590371 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
LDLRAD4-215ENST00000590371 ABTB2Q8N961 1025 aa25.91■■□□□ 1.74
LDLRAD4-215ENST00000590371 BCL9LQ86UU0 1499 aa25.91■■□□□ 1.74
LDLRAD4-215ENST00000590371 PLCH1Q4KWH8 1693 aa25.9■■□□□ 1.74
LDLRAD4-215ENST00000590371 ATRNO75882 1429 aa25.9■■□□□ 1.74
LDLRAD4-215ENST00000590371 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.9■■□□□ 1.74
LDLRAD4-215ENST00000590371 CDK12Q9NYV4 1490 aaPredicted RBP25.9■■□□□ 1.74
LDLRAD4-215ENST00000590371 SLIT2O94813 1529 aa25.89■■□□□ 1.74
LDLRAD4-215ENST00000590371 CRYBG1Q9Y4K1 1723 aa25.89■■□□□ 1.74
LDLRAD4-215ENST00000590371 UNC5CLQ8IV45 518 aa25.89■■□□□ 1.74
LDLRAD4-215ENST00000590371 ST20-MTHFSA0A0A6YYL1 179 aa25.88■■□□□ 1.73
LDLRAD4-215ENST00000590371 USP6P35125 1406 aa25.88■■□□□ 1.73
LDLRAD4-215ENST00000590371 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
LDLRAD4-215ENST00000590371 PHRF1Q9P1Y6 1649 aaKnown RBP25.87■■□□□ 1.73
LDLRAD4-215ENST00000590371 NWD2Q9ULI1 1742 aa25.86■■□□□ 1.73
LDLRAD4-215ENST00000590371 FAM83GA6ND36 823 aa25.86■■□□□ 1.73
LDLRAD4-215ENST00000590371 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 COL14A1Q05707 1796 aaKnown RBP25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 USP47Q96K76 1375 aa25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 RGS12O14924 1447 aa25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 TMC1Q8TDI8 760 aa25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 ZNF692Q9BU19 519 aaPredicted RBP25.84■■□□□ 1.73
LDLRAD4-215ENST00000590371 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
LDLRAD4-215ENST00000590371 PRDM11Q9NQV5 511 aa25.83■■□□□ 1.73
LDLRAD4-215ENST00000590371 SLC24A1O60721 1099 aa25.82■■□□□ 1.72
LDLRAD4-215ENST00000590371 GJD4Q96KN9 370 aaPredicted RBP25.82■■□□□ 1.72
LDLRAD4-215ENST00000590371 CCDC9Q9Y3X0 531 aaKnown RBP25.82■■□□□ 1.72
LDLRAD4-215ENST00000590371 BTG4Q9NY30 223 aa25.81■■□□□ 1.72
LDLRAD4-215ENST00000590371 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
LDLRAD4-215ENST00000590371 TESK2Q96S53 571 aa25.8■■□□□ 1.72
LDLRAD4-215ENST00000590371 KTN1Q86UP2 1357 aaKnown RBP25.8■■□□□ 1.72
LDLRAD4-215ENST00000590371 NLRP6P59044 892 aa25.79■■□□□ 1.72
LDLRAD4-215ENST00000590371 KIAA0232Q92628 1395 aa25.79■■□□□ 1.72
LDLRAD4-215ENST00000590371 NRKQ7Z2Y5 1582 aa25.78■■□□□ 1.72
LDLRAD4-215ENST00000590371 VPS72Q15906 364 aa25.77■■□□□ 1.72
LDLRAD4-215ENST00000590371 HDGFL2Q7Z4V5 671 aaPredicted RBP25.77■■□□□ 1.72
LDLRAD4-215ENST00000590371 PUS7Q96PZ0 661 aaKnown RBP25.77■■□□□ 1.72
LDLRAD4-215ENST00000590371 USP19O94966 1318 aa25.77■■□□□ 1.72
LDLRAD4-215ENST00000590371 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
LDLRAD4-215ENST00000590371 CHRNA2Q15822 529 aa25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 TTC21BQ7Z4L5 1316 aa25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 CPSF1Q10570 1443 aaKnown RBP25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 SSH2Q76I76 1423 aa25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 PIK3C2AO00443 1686 aa25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 MON2Q7Z3U7 1717 aa25.76■■□□□ 1.71
LDLRAD4-215ENST00000590371 GLI3P10071 1580 aa25.75■■□□□ 1.71
LDLRAD4-215ENST00000590371 TMF1P82094 1093 aa25.75■■□□□ 1.71
LDLRAD4-215ENST00000590371 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
LDLRAD4-215ENST00000590371 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
LDLRAD4-215ENST00000590371 GCP02774 474 aa25.73■■□□□ 1.71
LDLRAD4-215ENST00000590371 TERF2IPQ9NYB0 399 aa25.73■■□□□ 1.71
LDLRAD4-215ENST00000590371 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
LDLRAD4-215ENST00000590371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.71■■□□□ 1.71
LDLRAD4-215ENST00000590371 NINLQ9Y2I6 1382 aa25.7■■□□□ 1.71
LDLRAD4-215ENST00000590371 CD163L1Q9NR16 1453 aa25.7■■□□□ 1.7
LDLRAD4-215ENST00000590371 CPDO75976 1380 aa25.69■■□□□ 1.7
LDLRAD4-215ENST00000590371 STRN4Q9NRL3 753 aa25.69■■□□□ 1.7
LDLRAD4-215ENST00000590371 SLIT3O75094 1523 aa25.68■■□□□ 1.7
LDLRAD4-215ENST00000590371 A0A0G2JS52 829 aa25.68■■□□□ 1.7
LDLRAD4-215ENST00000590371 MYT1Q01538 1121 aa25.68■■□□□ 1.7
LDLRAD4-215ENST00000590371 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
LDLRAD4-215ENST00000590371 A0A1W2PP64 1363 aa25.68■■□□□ 1.7
LDLRAD4-215ENST00000590371 EVA1CP58658 441 aa25.67■■□□□ 1.7
LDLRAD4-215ENST00000590371 UPF1Q92900 1129 aaKnown RBP eCLIP25.67■■□□□ 1.7
LDLRAD4-215ENST00000590371 SOX12O15370 315 aa25.66■■□□□ 1.7
LDLRAD4-215ENST00000590371 EDC4Q6P2E9 1401 aaKnown RBP25.65■■□□□ 1.7
LDLRAD4-215ENST00000590371 KCNH5Q8NCM2 988 aa25.65■■□□□ 1.7
LDLRAD4-215ENST00000590371 SEPT12Q8IYM1 358 aa25.64■■□□□ 1.7
LDLRAD4-215ENST00000590371 FAM98CQ17RN3 349 aaKnown RBP25.63■■□□□ 1.69
LDLRAD4-215ENST00000590371 SPATA31A5Q5VU36 1347 aa25.63■■□□□ 1.69
LDLRAD4-215ENST00000590371 SPATA31A7Q8IWB4 1347 aa25.63■■□□□ 1.69
LDLRAD4-215ENST00000590371 LMO7Q8WWI1 1683 aa25.62■■□□□ 1.69
LDLRAD4-215ENST00000590371 NME9Q86XW9 330 aa25.62■■□□□ 1.69
LDLRAD4-215ENST00000590371 BRWD3Q6RI45 1802 aa25.62■■□□□ 1.69
LDLRAD4-215ENST00000590371 CAMTA1Q9Y6Y1 1673 aa25.61■■□□□ 1.69
LDLRAD4-215ENST00000590371 EIF4G2P78344 907 aaKnown RBP eCLIP25.61■■□□□ 1.69
LDLRAD4-215ENST00000590371 ZRANB1Q9UGI0 708 aa25.61■■□□□ 1.69
LDLRAD4-215ENST00000590371 USP35Q9P2H5 1018 aa25.59■■□□□ 1.69
LDLRAD4-215ENST00000590371 USP31Q70CQ4 1352 aa25.58■■□□□ 1.69
LDLRAD4-215ENST00000590371 ANKRD36BQ8N2N9 1353 aa25.58■■□□□ 1.69
LDLRAD4-215ENST00000590371 ONECUT3O60422 494 aaPredicted RBP25.58■■□□□ 1.69
LDLRAD4-215ENST00000590371 SPATA31A1Q5TZJ5 1347 aa25.58■■□□□ 1.69
LDLRAD4-215ENST00000590371 USP54Q70EL1 1684 aa25.58■■□□□ 1.68
LDLRAD4-215ENST00000590371 AATKQ6ZMQ8 1374 aa25.57■■□□□ 1.68
LDLRAD4-215ENST00000590371 HSPA5P11021 654 aaKnown RBP25.56■■□□□ 1.68
LDLRAD4-215ENST00000590371 LARP1Q6PKG0 1096 aaKnown RBP25.56■■□□□ 1.68
LDLRAD4-215ENST00000590371 POLR3GLQ9BT43 218 aa25.56■■□□□ 1.68
LDLRAD4-215ENST00000590371 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
LDLRAD4-215ENST00000590371 NFAT5O94916 1531 aa25.55■■□□□ 1.68
LDLRAD4-215ENST00000590371 KRT27Q7Z3Y8 459 aa25.55■■□□□ 1.68
LDLRAD4-215ENST00000590371 ARHGEF25Q86VW2 580 aa25.55■■□□□ 1.68
LDLRAD4-215ENST00000590371 COL18A1P39060 1754 aa25.53■■□□□ 1.68
LDLRAD4-215ENST00000590371 RGPD5Q99666 1765 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms