RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 NUTM2BA6NNL0 878 aaPredicted RBP26.16■■□□□ 1.78
MBD1-223ENST00000590215 NUTM2EB1AL46 878 aaPredicted RBP26.16■■□□□ 1.78
MBD1-223ENST00000590215 NUTM2AQ8IVF1 878 aaPredicted RBP26.16■■□□□ 1.78
MBD1-223ENST00000590215 LMOD2Q6P5Q4 547 aa26.15■■□□□ 1.78
MBD1-223ENST00000590215 TERF2IPQ9NYB0 399 aa26.14■■□□□ 1.78
MBD1-223ENST00000590215 KTN1Q86UP2 1357 aaKnown RBP26.14■■□□□ 1.78
MBD1-223ENST00000590215 A0A1W2PP64 1363 aa26.12■■□□□ 1.77
MBD1-223ENST00000590215 HDGFL2Q7Z4V5 671 aaPredicted RBP26.12■■□□□ 1.77
MBD1-223ENST00000590215 TTC21BQ7Z4L5 1316 aa26.12■■□□□ 1.77
MBD1-223ENST00000590215 MON2Q7Z3U7 1717 aa26.11■■□□□ 1.77
MBD1-223ENST00000590215 ANKRD36BQ8N2N9 1353 aa26.1■■□□□ 1.77
MBD1-223ENST00000590215 ABTB2Q8N961 1025 aa26.1■■□□□ 1.77
MBD1-223ENST00000590215 NRKQ7Z2Y5 1582 aa26.1■■□□□ 1.77
MBD1-223ENST00000590215 TTC21AQ8NDW8 1320 aa26.1■■□□□ 1.77
MBD1-223ENST00000590215 C11orf95C9JLR9 678 aaPredicted RBP26.09■■□□□ 1.77
MBD1-223ENST00000590215 CABLES1Q8TDN4 633 aa26.09■■□□□ 1.77
MBD1-223ENST00000590215 MEX3CQ5U5Q3 659 aaKnown RBP26.08■■□□□ 1.77
MBD1-223ENST00000590215 EDC4Q6P2E9 1401 aaKnown RBP26.07■■□□□ 1.76
MBD1-223ENST00000590215 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
MBD1-223ENST00000590215 USP19O94966 1318 aa26.07■■□□□ 1.76
MBD1-223ENST00000590215 ABCA3Q99758 1704 aa26.06■■□□□ 1.76
MBD1-223ENST00000590215 CRYBG1Q9Y4K1 1723 aa26.06■■□□□ 1.76
MBD1-223ENST00000590215 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
MBD1-223ENST00000590215 RGS17Q9UGC6 210 aaPredicted RBP26.06■■□□□ 1.76
MBD1-223ENST00000590215 MYOM1P52179 1685 aa26.06■■□□□ 1.76
MBD1-223ENST00000590215 NLRP13Q86W25 1043 aa26.05■■□□□ 1.76
MBD1-223ENST00000590215 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
MBD1-223ENST00000590215 NUTM2GQ5VZR2 741 aa26.04■■□□□ 1.76
MBD1-223ENST00000590215 PIK3C2AO00443 1686 aa26.03■■□□□ 1.76
MBD1-223ENST00000590215 NLRP6P59044 892 aa26.02■■□□□ 1.76
MBD1-223ENST00000590215 C8orf37Q96NL8 207 aa26.02■■□□□ 1.76
MBD1-223ENST00000590215 USP31Q70CQ4 1352 aa26.02■■□□□ 1.76
MBD1-223ENST00000590215 HAP1P54257 671 aaPredicted RBP26.01■■□□□ 1.75
MBD1-223ENST00000590215 FNBP4Q8N3X1 1017 aaPredicted RBP26.01■■□□□ 1.75
MBD1-223ENST00000590215 MARF1Q9Y4F3 1742 aaKnown RBP26.01■■□□□ 1.75
MBD1-223ENST00000590215 KIF7Q2M1P5 1343 aa26■■□□□ 1.75
MBD1-223ENST00000590215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26■■□□□ 1.75
MBD1-223ENST00000590215 NGLY1Q96IV0 654 aa25.99■■□□□ 1.75
MBD1-223ENST00000590215 AFF2P51816 1311 aa25.98■■□□□ 1.75
MBD1-223ENST00000590215 PLEKHG5O94827 1062 aa25.98■■□□□ 1.75
MBD1-223ENST00000590215 PHRF1Q9P1Y6 1649 aaKnown RBP25.98■■□□□ 1.75
MBD1-223ENST00000590215 SLIT3O75094 1523 aa25.98■■□□□ 1.75
MBD1-223ENST00000590215 GCP02774 474 aa25.97■■□□□ 1.75
MBD1-223ENST00000590215 ZNF772Q68DY9 489 aaPredicted RBP25.97■■□□□ 1.75
MBD1-223ENST00000590215 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
MBD1-223ENST00000590215 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
MBD1-223ENST00000590215 NME9Q86XW9 330 aa25.96■■□□□ 1.75
MBD1-223ENST00000590215 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
MBD1-223ENST00000590215 SLIT2O94813 1529 aa25.95■■□□□ 1.74
MBD1-223ENST00000590215 FAM83GA6ND36 823 aa25.95■■□□□ 1.74
MBD1-223ENST00000590215 CPDO75976 1380 aa25.95■■□□□ 1.74
MBD1-223ENST00000590215 ZRANB1Q9UGI0 708 aa25.93■■□□□ 1.74
MBD1-223ENST00000590215 CCDC7Q96M83 1385 aa25.93■■□□□ 1.74
MBD1-223ENST00000590215 BCL9LQ86UU0 1499 aa25.92■■□□□ 1.74
MBD1-223ENST00000590215 OVOS2A0A0J9YW53 1432 aa25.92■■□□□ 1.74
MBD1-223ENST00000590215 OVOS2Q6IE36 1432 aa25.92■■□□□ 1.74
MBD1-223ENST00000590215 POTEAQ6S8J7 498 aa25.92■■□□□ 1.74
MBD1-223ENST00000590215 KIAA0232Q92628 1395 aa25.92■■□□□ 1.74
MBD1-223ENST00000590215 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
MBD1-223ENST00000590215 KCNH5Q8NCM2 988 aa25.91■■□□□ 1.74
MBD1-223ENST00000590215 NSD3Q9BZ95 1437 aa25.9■■□□□ 1.74
MBD1-223ENST00000590215 FYB1O15117 783 aa25.9■■□□□ 1.74
MBD1-223ENST00000590215 ZC3H6P61129 1189 aaKnown RBP25.9■■□□□ 1.74
MBD1-223ENST00000590215 PANK3Q9H999 370 aa25.9■■□□□ 1.74
MBD1-223ENST00000590215 PRDM11Q9NQV5 511 aa25.9■■□□□ 1.74
MBD1-223ENST00000590215 USP21Q9UK80 565 aa25.9■■□□□ 1.74
MBD1-223ENST00000590215 COL14A1Q05707 1796 aaKnown RBP25.89■■□□□ 1.73
MBD1-223ENST00000590215 UNC5CLQ8IV45 518 aa25.88■■□□□ 1.73
MBD1-223ENST00000590215 NWD2Q9ULI1 1742 aa25.87■■□□□ 1.73
MBD1-223ENST00000590215 NFAT5O94916 1531 aa25.87■■□□□ 1.73
MBD1-223ENST00000590215 PLCH1Q4KWH8 1693 aa25.85■■□□□ 1.73
MBD1-223ENST00000590215 ARHGEF25Q86VW2 580 aa25.85■■□□□ 1.73
MBD1-223ENST00000590215 COG3Q96JB2 828 aa25.85■■□□□ 1.73
MBD1-223ENST00000590215 QTRT2Q9H974 415 aaKnown RBP25.85■■□□□ 1.73
MBD1-223ENST00000590215 ATRNO75882 1429 aa25.85■■□□□ 1.73
MBD1-223ENST00000590215 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.85■■□□□ 1.73
MBD1-223ENST00000590215 CHRNA2Q15822 529 aa25.84■■□□□ 1.73
MBD1-223ENST00000590215 TRPC5Q9UL62 973 aaPredicted RBP25.84■■□□□ 1.73
MBD1-223ENST00000590215 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
MBD1-223ENST00000590215 BTG4Q9NY30 223 aa25.83■■□□□ 1.73
MBD1-223ENST00000590215 AATKQ6ZMQ8 1374 aa25.82■■□□□ 1.72
MBD1-223ENST00000590215 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
MBD1-223ENST00000590215 LMO7Q8WWI1 1683 aa25.81■■□□□ 1.72
MBD1-223ENST00000590215 NRAPQ86VF7 1730 aa25.8■■□□□ 1.72
MBD1-223ENST00000590215 KIF20BQ96Q89 1820 aa25.79■■□□□ 1.72
MBD1-223ENST00000590215 VPS72Q15906 364 aa25.79■■□□□ 1.72
MBD1-223ENST00000590215 ILDR2Q71H61 639 aa25.79■■□□□ 1.72
MBD1-223ENST00000590215 CAMTA1Q9Y6Y1 1673 aa25.78■■□□□ 1.72
MBD1-223ENST00000590215 SOX12O15370 315 aa25.78■■□□□ 1.72
MBD1-223ENST00000590215 PER1O15534 1290 aaPredicted RBP25.78■■□□□ 1.72
MBD1-223ENST00000590215 RXRBP28702 533 aa25.78■■□□□ 1.72
MBD1-223ENST00000590215 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
MBD1-223ENST00000590215 COL18A1P39060 1754 aa25.77■■□□□ 1.72
MBD1-223ENST00000590215 ABCC6O95255 1503 aa25.77■■□□□ 1.72
MBD1-223ENST00000590215 KNSTRNQ9Y448 316 aa25.76■■□□□ 1.71
MBD1-223ENST00000590215 NSD2O96028 1365 aa25.75■■□□□ 1.71
MBD1-223ENST00000590215 GJD4Q96KN9 370 aaPredicted RBP25.75■■□□□ 1.71
MBD1-223ENST00000590215 AXIN2Q9Y2T1 843 aa25.74■■□□□ 1.71
MBD1-223ENST00000590215 CDK12Q9NYV4 1490 aaPredicted RBP25.73■■□□□ 1.71
MBD1-223ENST00000590215 AMER1Q5JTC6 1135 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms