RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 TRPC5Q9UL62 973 aaPredicted RBP29.86■■■□□ 2.37
CIRBP-224ENST00000589686 CDK12Q9NYV4 1490 aaPredicted RBP29.85■■■□□ 2.37
CIRBP-224ENST00000589686 BCL9LQ86UU0 1499 aa29.83■■■□□ 2.37
CIRBP-224ENST00000589686 SBNO2Q9Y2G9 1366 aa29.82■■■□□ 2.36
CIRBP-224ENST00000589686 ABCA3Q99758 1704 aa29.82■■■□□ 2.36
CIRBP-224ENST00000589686 CABP1Q9NZU7 370 aa29.81■■■□□ 2.36
CIRBP-224ENST00000589686 TIMELESSQ9UNS1 1208 aa29.81■■■□□ 2.36
CIRBP-224ENST00000589686 ATRNO75882 1429 aa29.8■■■□□ 2.36
CIRBP-224ENST00000589686 SLIT2O94813 1529 aa29.79■■■□□ 2.36
CIRBP-224ENST00000589686 UNC5CLQ8IV45 518 aa29.78■■■□□ 2.36
CIRBP-224ENST00000589686 BRD4O60885 1362 aaPredicted RBP29.76■■■□□ 2.35
CIRBP-224ENST00000589686 ATAD2Q6PL18 1390 aa29.75■■■□□ 2.35
CIRBP-224ENST00000589686 FAM83GA6ND36 823 aa29.74■■■□□ 2.35
CIRBP-224ENST00000589686 ABTB2Q8N961 1025 aa29.74■■■□□ 2.35
CIRBP-224ENST00000589686 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.74■■■□□ 2.35
CIRBP-224ENST00000589686 RGS12O14924 1447 aa29.72■■■□□ 2.35
CIRBP-224ENST00000589686 GJD4Q96KN9 370 aaPredicted RBP29.72■■■□□ 2.35
CIRBP-224ENST00000589686 CRYBG1Q9Y4K1 1723 aa29.71■■■□□ 2.35
CIRBP-224ENST00000589686 NUTM2GQ5VZR2 741 aa29.71■■■□□ 2.35
CIRBP-224ENST00000589686 USP6P35125 1406 aa29.71■■■□□ 2.35
CIRBP-224ENST00000589686 NWD2Q9ULI1 1742 aa29.69■■■□□ 2.34
CIRBP-224ENST00000589686 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
CIRBP-224ENST00000589686 ZNF692Q9BU19 519 aaPredicted RBP29.69■■■□□ 2.34
CIRBP-224ENST00000589686 PLCH1Q4KWH8 1693 aa29.69■■■□□ 2.34
CIRBP-224ENST00000589686 NLRP13Q86W25 1043 aa29.67■■■□□ 2.34
CIRBP-224ENST00000589686 ST20-MTHFSA0A0A6YYL1 179 aa29.66■■■□□ 2.34
CIRBP-224ENST00000589686 SLC24A1O60721 1099 aa29.66■■■□□ 2.34
CIRBP-224ENST00000589686 VPS72Q15906 364 aa29.66■■■□□ 2.34
CIRBP-224ENST00000589686 PRDM11Q9NQV5 511 aa29.66■■■□□ 2.34
CIRBP-224ENST00000589686 COL14A1Q05707 1796 aaKnown RBP29.65■■■□□ 2.34
CIRBP-224ENST00000589686 PUS7Q96PZ0 661 aaKnown RBP29.64■■■□□ 2.34
CIRBP-224ENST00000589686 BTG4Q9NY30 223 aa29.64■■■□□ 2.34
CIRBP-224ENST00000589686 PHRF1Q9P1Y6 1649 aaKnown RBP29.63■■■□□ 2.33
CIRBP-224ENST00000589686 SSH2Q76I76 1423 aa29.63■■■□□ 2.33
CIRBP-224ENST00000589686 TESK2Q96S53 571 aa29.63■■■□□ 2.33
CIRBP-224ENST00000589686 USP19O94966 1318 aa29.63■■■□□ 2.33
CIRBP-224ENST00000589686 KIAA0232Q92628 1395 aa29.62■■■□□ 2.33
CIRBP-224ENST00000589686 CPSF1Q10570 1443 aaKnown RBP29.62■■■□□ 2.33
CIRBP-224ENST00000589686 ZC3H6P61129 1189 aaKnown RBP29.6■■■□□ 2.33
CIRBP-224ENST00000589686 CCDC9Q9Y3X0 531 aaKnown RBP29.6■■■□□ 2.33
CIRBP-224ENST00000589686 USP47Q96K76 1375 aa29.6■■■□□ 2.33
CIRBP-224ENST00000589686 NLRP6P59044 892 aa29.59■■■□□ 2.33
CIRBP-224ENST00000589686 GLI3P10071 1580 aa29.59■■■□□ 2.33
CIRBP-224ENST00000589686 AKAP12Q02952 1782 aa29.59■■■□□ 2.33
CIRBP-224ENST00000589686 TTC21BQ7Z4L5 1316 aa29.58■■■□□ 2.33
CIRBP-224ENST00000589686 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
CIRBP-224ENST00000589686 TMC1Q8TDI8 760 aa29.58■■■□□ 2.33
CIRBP-224ENST00000589686 UPF1Q92900 1129 aaKnown RBP eCLIP29.58■■■□□ 2.33
CIRBP-224ENST00000589686 TTC21AQ8NDW8 1320 aa29.57■■■□□ 2.32
CIRBP-224ENST00000589686 GCP02774 474 aa29.57■■■□□ 2.32
CIRBP-224ENST00000589686 NRAPQ86VF7 1730 aa29.57■■■□□ 2.32
CIRBP-224ENST00000589686 NRKQ7Z2Y5 1582 aa29.56■■■□□ 2.32
CIRBP-224ENST00000589686 CHRNA2Q15822 529 aa29.56■■■□□ 2.32
CIRBP-224ENST00000589686 CPDO75976 1380 aa29.55■■■□□ 2.32
CIRBP-224ENST00000589686 SLC12A5Q9H2X9 1139 aa29.54■■■□□ 2.32
CIRBP-224ENST00000589686 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
CIRBP-224ENST00000589686 ONECUT3O60422 494 aaPredicted RBP29.52■■■□□ 2.32
CIRBP-224ENST00000589686 TERF2IPQ9NYB0 399 aa29.52■■■□□ 2.32
CIRBP-224ENST00000589686 PIK3C2AO00443 1686 aa29.52■■■□□ 2.32
CIRBP-224ENST00000589686 CD163L1Q9NR16 1453 aa29.51■■■□□ 2.31
CIRBP-224ENST00000589686 TMF1P82094 1093 aa29.51■■■□□ 2.31
CIRBP-224ENST00000589686 NINLQ9Y2I6 1382 aa29.5■■■□□ 2.31
CIRBP-224ENST00000589686 SLIT3O75094 1523 aa29.5■■■□□ 2.31
CIRBP-224ENST00000589686 MON2Q7Z3U7 1717 aa29.49■■■□□ 2.31
CIRBP-224ENST00000589686 SPATA31A5Q5VU36 1347 aa29.48■■■□□ 2.31
CIRBP-224ENST00000589686 SPATA31A7Q8IWB4 1347 aa29.48■■■□□ 2.31
CIRBP-224ENST00000589686 SEPT12Q8IYM1 358 aa29.48■■■□□ 2.31
CIRBP-224ENST00000589686 EVA1CP58658 441 aa29.46■■■□□ 2.31
CIRBP-224ENST00000589686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.46■■■□□ 2.31
CIRBP-224ENST00000589686 KCNH5Q8NCM2 988 aa29.46■■■□□ 2.31
CIRBP-224ENST00000589686 STRN4Q9NRL3 753 aa29.46■■■□□ 2.31
CIRBP-224ENST00000589686 A0A1W2PP64 1363 aa29.44■■■□□ 2.3
CIRBP-224ENST00000589686 FAM98CQ17RN3 349 aaKnown RBP29.44■■■□□ 2.3
CIRBP-224ENST00000589686 CDCA8Q53HL2 280 aa29.44■■■□□ 2.3
CIRBP-224ENST00000589686 EDC4Q6P2E9 1401 aaKnown RBP29.44■■■□□ 2.3
CIRBP-224ENST00000589686 CAMTA1Q9Y6Y1 1673 aa29.44■■■□□ 2.3
CIRBP-224ENST00000589686 LMO7Q8WWI1 1683 aa29.43■■■□□ 2.3
CIRBP-224ENST00000589686 SPATA31A1Q5TZJ5 1347 aa29.42■■■□□ 2.3
CIRBP-224ENST00000589686 AATKQ6ZMQ8 1374 aa29.41■■■□□ 2.3
CIRBP-224ENST00000589686 USP31Q70CQ4 1352 aa29.41■■■□□ 2.3
CIRBP-224ENST00000589686 A0A0G2JS52 829 aa29.41■■■□□ 2.3
CIRBP-224ENST00000589686 ZBTB7CA1YPR0 619 aa29.41■■■□□ 2.3
CIRBP-224ENST00000589686 MYT1Q01538 1121 aa29.41■■■□□ 2.3
CIRBP-224ENST00000589686 NME9Q86XW9 330 aa29.39■■■□□ 2.3
CIRBP-224ENST00000589686 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
CIRBP-224ENST00000589686 ARHGEF25Q86VW2 580 aa29.38■■■□□ 2.29
CIRBP-224ENST00000589686 BRWD3Q6RI45 1802 aa29.38■■■□□ 2.29
CIRBP-224ENST00000589686 SOX12O15370 315 aa29.37■■■□□ 2.29
CIRBP-224ENST00000589686 LARP1Q6PKG0 1096 aaKnown RBP29.37■■■□□ 2.29
CIRBP-224ENST00000589686 ZRANB1Q9UGI0 708 aa29.37■■■□□ 2.29
CIRBP-224ENST00000589686 COL5A2P05997 1499 aaPredicted RBP29.36■■■□□ 2.29
CIRBP-224ENST00000589686 EP400Q96L91 3159 aa29.36■■■□□ 2.29
CIRBP-224ENST00000589686 CCDC125Q86Z20 511 aa29.35■■■□□ 2.29
CIRBP-224ENST00000589686 ANKRD36BQ8N2N9 1353 aa29.35■■■□□ 2.29
CIRBP-224ENST00000589686 USP35Q9P2H5 1018 aa29.34■■■□□ 2.29
CIRBP-224ENST00000589686 USP54Q70EL1 1684 aa29.34■■■□□ 2.29
CIRBP-224ENST00000589686 NFAT5O94916 1531 aa29.33■■■□□ 2.29
CIRBP-224ENST00000589686 EIF4G2P78344 907 aaKnown RBP eCLIP29.32■■■□□ 2.28
CIRBP-224ENST00000589686 BARGINQ6ZT62 677 aa29.32■■■□□ 2.28
CIRBP-224ENST00000589686 TCP11L2Q8N4U5 519 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms