RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 MARF1Q9Y4F3 1742 aaKnown RBP28.07■■■□□ 2.08
LINC00654-202ENST00000589201 QTRT2Q9H974 415 aaKnown RBP28.07■■■□□ 2.08
LINC00654-202ENST00000589201 USP21Q9UK80 565 aa28.07■■■□□ 2.08
LINC00654-202ENST00000589201 RXRBP28702 533 aa28.04■■■□□ 2.08
LINC00654-202ENST00000589201 TESK2Q96S53 571 aa28.03■■■□□ 2.08
LINC00654-202ENST00000589201 ATAD2Q6PL18 1390 aa28.02■■■□□ 2.08
LINC00654-202ENST00000589201 ABCA3Q99758 1704 aa28.02■■■□□ 2.08
LINC00654-202ENST00000589201 NUTM2GQ5VZR2 741 aa28.02■■■□□ 2.08
LINC00654-202ENST00000589201 USP47Q96K76 1375 aa28■■■□□ 2.07
LINC00654-202ENST00000589201 ABTB2Q8N961 1025 aa28■■■□□ 2.07
LINC00654-202ENST00000589201 BCL9LQ86UU0 1499 aa28■■■□□ 2.07
LINC00654-202ENST00000589201 TRPC5Q9UL62 973 aaPredicted RBP27.98■■■□□ 2.07
LINC00654-202ENST00000589201 USP6P35125 1406 aa27.98■■■□□ 2.07
LINC00654-202ENST00000589201 FAM83GA6ND36 823 aa27.97■■■□□ 2.07
LINC00654-202ENST00000589201 RBM6P78332 1123 aaKnown RBP27.97■■■□□ 2.07
LINC00654-202ENST00000589201 ZNF692Q9BU19 519 aaPredicted RBP27.96■■■□□ 2.07
LINC00654-202ENST00000589201 SLIT2O94813 1529 aa27.96■■■□□ 2.07
LINC00654-202ENST00000589201 BRD4O60885 1362 aaPredicted RBP27.96■■■□□ 2.07
LINC00654-202ENST00000589201 SLC24A1O60721 1099 aa27.95■■■□□ 2.06
LINC00654-202ENST00000589201 CRYBG1Q9Y4K1 1723 aa27.95■■■□□ 2.06
LINC00654-202ENST00000589201 UNC5CLQ8IV45 518 aa27.94■■■□□ 2.06
LINC00654-202ENST00000589201 TMC1Q8TDI8 760 aa27.94■■■□□ 2.06
LINC00654-202ENST00000589201 PUS7Q96PZ0 661 aaKnown RBP27.94■■■□□ 2.06
LINC00654-202ENST00000589201 ATRNO75882 1429 aa27.93■■■□□ 2.06
LINC00654-202ENST00000589201 SSH2Q76I76 1423 aa27.93■■■□□ 2.06
LINC00654-202ENST00000589201 SLC12A5Q9H2X9 1139 aa27.93■■■□□ 2.06
LINC00654-202ENST00000589201 CPSF1Q10570 1443 aaKnown RBP27.92■■■□□ 2.06
LINC00654-202ENST00000589201 NLRP13Q86W25 1043 aa27.91■■■□□ 2.06
LINC00654-202ENST00000589201 AKAP12Q02952 1782 aa27.9■■■□□ 2.06
LINC00654-202ENST00000589201 TTC21BQ7Z4L5 1316 aa27.9■■■□□ 2.06
LINC00654-202ENST00000589201 KTN1Q86UP2 1357 aaKnown RBP27.89■■■□□ 2.06
LINC00654-202ENST00000589201 NLRP6P59044 892 aa27.88■■■□□ 2.05
LINC00654-202ENST00000589201 ZC3H6P61129 1189 aaKnown RBP27.88■■■□□ 2.05
LINC00654-202ENST00000589201 PHRF1Q9P1Y6 1649 aaKnown RBP27.88■■■□□ 2.05
LINC00654-202ENST00000589201 CDK12Q9NYV4 1490 aaPredicted RBP27.88■■■□□ 2.05
LINC00654-202ENST00000589201 USP19O94966 1318 aa27.88■■■□□ 2.05
LINC00654-202ENST00000589201 PLCH1Q4KWH8 1693 aa27.87■■■□□ 2.05
LINC00654-202ENST00000589201 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.87■■■□□ 2.05
LINC00654-202ENST00000589201 TMF1P82094 1093 aa27.87■■■□□ 2.05
LINC00654-202ENST00000589201 GJD4Q96KN9 370 aaPredicted RBP27.87■■■□□ 2.05
LINC00654-202ENST00000589201 PRDM11Q9NQV5 511 aa27.87■■■□□ 2.05
LINC00654-202ENST00000589201 BTG4Q9NY30 223 aa27.87■■■□□ 2.05
LINC00654-202ENST00000589201 CD163L1Q9NR16 1453 aa27.87■■■□□ 2.05
LINC00654-202ENST00000589201 KIAA0232Q92628 1395 aa27.86■■■□□ 2.05
LINC00654-202ENST00000589201 NWD2Q9ULI1 1742 aa27.85■■■□□ 2.05
LINC00654-202ENST00000589201 RGS12O14924 1447 aa27.84■■■□□ 2.05
LINC00654-202ENST00000589201 COL14A1Q05707 1796 aaKnown RBP27.84■■■□□ 2.05
LINC00654-202ENST00000589201 GCP02774 474 aa27.84■■■□□ 2.05
LINC00654-202ENST00000589201 CHRNA2Q15822 529 aa27.84■■■□□ 2.05
LINC00654-202ENST00000589201 HDGFL2Q7Z4V5 671 aaPredicted RBP27.84■■■□□ 2.05
LINC00654-202ENST00000589201 VPS72Q15906 364 aa27.83■■■□□ 2.05
LINC00654-202ENST00000589201 TTC21AQ8NDW8 1320 aa27.83■■■□□ 2.05
LINC00654-202ENST00000589201 PIK3C2AO00443 1686 aa27.82■■■□□ 2.04
LINC00654-202ENST00000589201 TERF2IPQ9NYB0 399 aa27.82■■■□□ 2.04
LINC00654-202ENST00000589201 MON2Q7Z3U7 1717 aa27.81■■■□□ 2.04
LINC00654-202ENST00000589201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.81■■■□□ 2.04
LINC00654-202ENST00000589201 NRKQ7Z2Y5 1582 aa27.81■■■□□ 2.04
LINC00654-202ENST00000589201 CCDC9Q9Y3X0 531 aaKnown RBP27.8■■■□□ 2.04
LINC00654-202ENST00000589201 A0A1W2PP64 1363 aa27.79■■■□□ 2.04
LINC00654-202ENST00000589201 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
LINC00654-202ENST00000589201 GLI3P10071 1580 aa27.77■■■□□ 2.04
LINC00654-202ENST00000589201 CPDO75976 1380 aa27.77■■■□□ 2.04
LINC00654-202ENST00000589201 EIF4G2P78344 907 aaKnown RBP eCLIP27.77■■■□□ 2.04
LINC00654-202ENST00000589201 CDCA8Q53HL2 280 aa27.77■■■□□ 2.04
LINC00654-202ENST00000589201 ZRANB1Q9UGI0 708 aa27.77■■■□□ 2.04
LINC00654-202ENST00000589201 NRAPQ86VF7 1730 aa27.77■■■□□ 2.04
LINC00654-202ENST00000589201 SLIT3O75094 1523 aa27.76■■■□□ 2.03
LINC00654-202ENST00000589201 NME9Q86XW9 330 aa27.75■■■□□ 2.03
LINC00654-202ENST00000589201 HSPA5P11021 654 aaKnown RBP27.74■■■□□ 2.03
LINC00654-202ENST00000589201 EDC4Q6P2E9 1401 aaKnown RBP27.74■■■□□ 2.03
LINC00654-202ENST00000589201 ZBTB7CA1YPR0 619 aa27.73■■■□□ 2.03
LINC00654-202ENST00000589201 STRN4Q9NRL3 753 aa27.72■■■□□ 2.03
LINC00654-202ENST00000589201 SOX12O15370 315 aa27.71■■■□□ 2.03
LINC00654-202ENST00000589201 KCNH5Q8NCM2 988 aa27.71■■■□□ 2.03
LINC00654-202ENST00000589201 USP31Q70CQ4 1352 aa27.71■■■□□ 2.03
LINC00654-202ENST00000589201 CAMTA1Q9Y6Y1 1673 aa27.7■■■□□ 2.02
LINC00654-202ENST00000589201 ONECUT3O60422 494 aaPredicted RBP27.69■■■□□ 2.02
LINC00654-202ENST00000589201 EVA1CP58658 441 aa27.69■■■□□ 2.02
LINC00654-202ENST00000589201 ANKRD36BQ8N2N9 1353 aa27.69■■■□□ 2.02
LINC00654-202ENST00000589201 SPATA31A5Q5VU36 1347 aa27.68■■■□□ 2.02
LINC00654-202ENST00000589201 SPATA31A7Q8IWB4 1347 aa27.68■■■□□ 2.02
LINC00654-202ENST00000589201 ARHGEF25Q86VW2 580 aa27.67■■■□□ 2.02
LINC00654-202ENST00000589201 SEPT12Q8IYM1 358 aa27.67■■■□□ 2.02
LINC00654-202ENST00000589201 UPF1Q92900 1129 aaKnown RBP eCLIP27.67■■■□□ 2.02
LINC00654-202ENST00000589201 LMO7Q8WWI1 1683 aa27.67■■■□□ 2.02
LINC00654-202ENST00000589201 FAM98CQ17RN3 349 aaKnown RBP27.66■■■□□ 2.02
LINC00654-202ENST00000589201 AATKQ6ZMQ8 1374 aa27.65■■■□□ 2.02
LINC00654-202ENST00000589201 LARP1Q6PKG0 1096 aaKnown RBP27.64■■■□□ 2.02
LINC00654-202ENST00000589201 POLR3GLQ9BT43 218 aa27.64■■■□□ 2.02
LINC00654-202ENST00000589201 AXIN2Q9Y2T1 843 aa27.63■■■□□ 2.01
LINC00654-202ENST00000589201 SPATA31A1Q5TZJ5 1347 aa27.63■■■□□ 2.01
LINC00654-202ENST00000589201 NFAT5O94916 1531 aa27.62■■■□□ 2.01
LINC00654-202ENST00000589201 USP54Q70EL1 1684 aa27.62■■■□□ 2.01
LINC00654-202ENST00000589201 COL18A1P39060 1754 aa27.61■■■□□ 2.01
LINC00654-202ENST00000589201 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
LINC00654-202ENST00000589201 COL5A2P05997 1499 aaPredicted RBP27.6■■■□□ 2.01
LINC00654-202ENST00000589201 A0A0G2JS52 829 aa27.6■■■□□ 2.01
LINC00654-202ENST00000589201 MYT1Q01538 1121 aa27.6■■■□□ 2.01
LINC00654-202ENST00000589201 OVOS2A0A0J9YW53 1432 aa27.59■■■□□ 2.01
LINC00654-202ENST00000589201 OVOS2Q6IE36 1432 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms