RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 POLR3AO14802 1390 aaPredicted RBP21.08■□□□□ 0.96
DNMT1-217ENST00000589091 CENPJQ9HC77 1338 aaPredicted RBP21.07■□□□□ 0.96
DNMT1-217ENST00000589091 VPS72Q15906 364 aa21.07■□□□□ 0.96
DNMT1-217ENST00000589091 L3MBTL2Q969R5 705 aa21.07■□□□□ 0.96
DNMT1-217ENST00000589091 CCDC61Q9Y6R9 512 aa21.07■□□□□ 0.96
DNMT1-217ENST00000589091 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
DNMT1-217ENST00000589091 PLEKHG3A1L390 1219 aa21.03■□□□□ 0.96
DNMT1-217ENST00000589091 FAM83GA6ND36 823 aa21.03■□□□□ 0.96
DNMT1-217ENST00000589091 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
DNMT1-217ENST00000589091 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
DNMT1-217ENST00000589091 CCDC9Q9Y3X0 531 aaKnown RBP21.02■□□□□ 0.96
DNMT1-217ENST00000589091 ACEP12821 1306 aa21.02■□□□□ 0.95
DNMT1-217ENST00000589091 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
DNMT1-217ENST00000589091 PPIP5K1Q6PFW1 1433 aa21.01■□□□□ 0.95
DNMT1-217ENST00000589091 AKAP12Q02952 1782 aa21■□□□□ 0.95
DNMT1-217ENST00000589091 NBPF8Q3BBV2 869 aa21■□□□□ 0.95
DNMT1-217ENST00000589091 NRKQ7Z2Y5 1582 aa21■□□□□ 0.95
DNMT1-217ENST00000589091 BRD4O60885 1362 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-217ENST00000589091 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
DNMT1-217ENST00000589091 BTG4Q9NY30 223 aa20.99■□□□□ 0.95
DNMT1-217ENST00000589091 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
DNMT1-217ENST00000589091 ONECUT3O60422 494 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-217ENST00000589091 SEPT12Q8IYM1 358 aa20.97■□□□□ 0.95
DNMT1-217ENST00000589091 PRDM11Q9NQV5 511 aa20.97■□□□□ 0.95
DNMT1-217ENST00000589091 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
DNMT1-217ENST00000589091 EP400Q96L91 3159 aa20.95■□□□□ 0.94
DNMT1-217ENST00000589091 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
DNMT1-217ENST00000589091 BLMP54132 1417 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-217ENST00000589091 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
DNMT1-217ENST00000589091 RGPD1P0DJD0 1748 aa20.94■□□□□ 0.94
DNMT1-217ENST00000589091 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
DNMT1-217ENST00000589091 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
DNMT1-217ENST00000589091 ABTB2Q8N961 1025 aa20.93■□□□□ 0.94
DNMT1-217ENST00000589091 KRT27Q7Z3Y8 459 aa20.92■□□□□ 0.94
DNMT1-217ENST00000589091 A0A0G2JS52 829 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 USP6P35125 1406 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 MYT1Q01538 1121 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
DNMT1-217ENST00000589091 PIK3C2AO00443 1686 aa20.9■□□□□ 0.94
DNMT1-217ENST00000589091 USP19O94966 1318 aa20.9■□□□□ 0.94
DNMT1-217ENST00000589091 NUTM2GQ5VZR2 741 aa20.9■□□□□ 0.94
DNMT1-217ENST00000589091 MON2Q7Z3U7 1717 aa20.9■□□□□ 0.94
DNMT1-217ENST00000589091 CPDO75976 1380 aa20.89■□□□□ 0.93
DNMT1-217ENST00000589091 FAM98CQ17RN3 349 aaKnown RBP20.89■□□□□ 0.93
DNMT1-217ENST00000589091 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
DNMT1-217ENST00000589091 ZC3H6P61129 1189 aaKnown RBP20.88■□□□□ 0.93
DNMT1-217ENST00000589091 SF3B2Q13435 895 aaKnown RBP20.88■□□□□ 0.93
DNMT1-217ENST00000589091 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
DNMT1-217ENST00000589091 SBNO2Q9Y2G9 1366 aa20.87■□□□□ 0.93
DNMT1-217ENST00000589091 SLIT3O75094 1523 aa20.87■□□□□ 0.93
DNMT1-217ENST00000589091 CHRNA2Q15822 529 aa20.86■□□□□ 0.93
DNMT1-217ENST00000589091 CAMTA1Q9Y6Y1 1673 aa20.86■□□□□ 0.93
DNMT1-217ENST00000589091 RGPD5Q99666 1765 aa20.85■□□□□ 0.93
DNMT1-217ENST00000589091 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
DNMT1-217ENST00000589091 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
DNMT1-217ENST00000589091 ZRANB1Q9UGI0 708 aa20.85■□□□□ 0.93
DNMT1-217ENST00000589091 SSH2Q76I76 1423 aa20.85■□□□□ 0.93
DNMT1-217ENST00000589091 TNS1Q9HBL0 1735 aaKnown RBP20.84■□□□□ 0.93
DNMT1-217ENST00000589091 STRN4Q9NRL3 753 aa20.84■□□□□ 0.93
DNMT1-217ENST00000589091 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.93
DNMT1-217ENST00000589091 COL18A1P39060 1754 aa20.83■□□□□ 0.93
DNMT1-217ENST00000589091 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.93
DNMT1-217ENST00000589091 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.92
DNMT1-217ENST00000589091 USP54Q70EL1 1684 aa20.83■□□□□ 0.92
DNMT1-217ENST00000589091 GCP02774 474 aa20.82■□□□□ 0.92
DNMT1-217ENST00000589091 EVA1CP58658 441 aa20.82■□□□□ 0.92
DNMT1-217ENST00000589091 CARD11Q9BXL7 1154 aa20.82■□□□□ 0.92
DNMT1-217ENST00000589091 NLRP6P59044 892 aa20.81■□□□□ 0.92
DNMT1-217ENST00000589091 CPSF1Q10570 1443 aaKnown RBP20.79■□□□□ 0.92
DNMT1-217ENST00000589091 COL5A2P05997 1499 aaPredicted RBP20.79■□□□□ 0.92
DNMT1-217ENST00000589091 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
DNMT1-217ENST00000589091 BAG6P46379 1132 aa20.78■□□□□ 0.92
DNMT1-217ENST00000589091 BARGINQ6ZT62 677 aa20.78■□□□□ 0.92
DNMT1-217ENST00000589091 LTN1O94822 1766 aa20.77■□□□□ 0.91
DNMT1-217ENST00000589091 TTC21BQ7Z4L5 1316 aa20.77■□□□□ 0.91
DNMT1-217ENST00000589091 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
DNMT1-217ENST00000589091 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
DNMT1-217ENST00000589091 THRAP3Q9Y2W1 955 aaKnown RBP20.76■□□□□ 0.91
DNMT1-217ENST00000589091 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
DNMT1-217ENST00000589091 SBF2Q86WG5 1849 aa20.75■□□□□ 0.91
DNMT1-217ENST00000589091 CRB1P82279 1406 aa20.75■□□□□ 0.91
DNMT1-217ENST00000589091 ABCC6O95255 1503 aa20.74■□□□□ 0.91
DNMT1-217ENST00000589091 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
DNMT1-217ENST00000589091 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
DNMT1-217ENST00000589091 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
DNMT1-217ENST00000589091 USP35Q9P2H5 1018 aa20.74■□□□□ 0.91
DNMT1-217ENST00000589091 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
DNMT1-217ENST00000589091 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
DNMT1-217ENST00000589091 NFAT5O94916 1531 aa20.72■□□□□ 0.91
DNMT1-217ENST00000589091 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
DNMT1-217ENST00000589091 ZBTB7CA1YPR0 619 aa20.71■□□□□ 0.91
DNMT1-217ENST00000589091 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
DNMT1-217ENST00000589091 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
DNMT1-217ENST00000589091 FAM182BQ5T319 152 aa20.7■□□□□ 0.9
DNMT1-217ENST00000589091 PUS7Q96PZ0 661 aaKnown RBP20.7■□□□□ 0.9
DNMT1-217ENST00000589091 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
DNMT1-217ENST00000589091 RREB1Q92766 1687 aa20.69■□□□□ 0.9
DNMT1-217ENST00000589091 PEAK1Q9H792 1746 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms