RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TTC21BQ7Z4L5 1316 aa15.28■□□□□ 0.04
SMAD4-205ENST00000588745 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
SMAD4-205ENST00000588745 OVOS2A0A0J9YW53 1432 aa15.28■□□□□ 0.04
SMAD4-205ENST00000588745 OVOS2Q6IE36 1432 aa15.28■□□□□ 0.04
SMAD4-205ENST00000588745 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMAD4-205ENST00000588745 NME9Q86XW9 330 aa15.28■□□□□ 0.04
SMAD4-205ENST00000588745 PMFBP1Q8TBY8 1022 aa15.28■□□□□ 0.04
SMAD4-205ENST00000588745 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
SMAD4-205ENST00000588745 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.03
SMAD4-205ENST00000588745 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
SMAD4-205ENST00000588745 PIK3C2AO00443 1686 aa15.27■□□□□ 0.03
SMAD4-205ENST00000588745 KIF1AQ12756 1690 aa15.27■□□□□ 0.03
SMAD4-205ENST00000588745 USP54Q70EL1 1684 aa15.27■□□□□ 0.03
SMAD4-205ENST00000588745 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.03
SMAD4-205ENST00000588745 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
SMAD4-205ENST00000588745 MTHFSP49914 203 aa15.25■□□□□ 0.03
SMAD4-205ENST00000588745 COG3Q96JB2 828 aa15.25■□□□□ 0.03
SMAD4-205ENST00000588745 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
SMAD4-205ENST00000588745 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
SMAD4-205ENST00000588745 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
SMAD4-205ENST00000588745 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
SMAD4-205ENST00000588745 LRRC7Q96NW7 1537 aa15.24■□□□□ 0.03
SMAD4-205ENST00000588745 C1orf167Q5SNV9 1468 aa15.24■□□□□ 0.03
SMAD4-205ENST00000588745 ADAMTS8Q9UP79 889 aa15.24■□□□□ 0.03
SMAD4-205ENST00000588745 MST1RQ04912 1400 aa15.23■□□□□ 0.03
SMAD4-205ENST00000588745 MAP2P11137 1827 aaKnown RBP15.23■□□□□ 0.03
SMAD4-205ENST00000588745 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
SMAD4-205ENST00000588745 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
SMAD4-205ENST00000588745 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-205ENST00000588745 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
SMAD4-205ENST00000588745 MSH6P52701 1360 aa15.21■□□□□ 0.03
SMAD4-205ENST00000588745 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.03
SMAD4-205ENST00000588745 ESCO1Q5FWF5 840 aa15.21■□□□□ 0.02
SMAD4-205ENST00000588745 ZNF335Q9H4Z2 1342 aaPredicted RBP15.2■□□□□ 0.02
SMAD4-205ENST00000588745 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
SMAD4-205ENST00000588745 ATF3P18847 181 aa15.19■□□□□ 0.02
SMAD4-205ENST00000588745 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
SMAD4-205ENST00000588745 TRPM3Q9HCF6 1732 aaPredicted RBP15.19■□□□□ 0.02
SMAD4-205ENST00000588745 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
SMAD4-205ENST00000588745 ORAI2Q96SN7 254 aa15.17■□□□□ 0.02
SMAD4-205ENST00000588745 EMILIN1Q9Y6C2 1016 aa15.16■□□□□ 0.02
SMAD4-205ENST00000588745 PEAK1Q9H792 1746 aa15.16■□□□□ 0.02
SMAD4-205ENST00000588745 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
SMAD4-205ENST00000588745 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
SMAD4-205ENST00000588745 FBLN1P23142 703 aa15.15■□□□□ 0.02
SMAD4-205ENST00000588745 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
SMAD4-205ENST00000588745 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
SMAD4-205ENST00000588745 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
SMAD4-205ENST00000588745 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
SMAD4-205ENST00000588745 PSME1Q06323 249 aa15.13■□□□□ 0.01
SMAD4-205ENST00000588745 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
SMAD4-205ENST00000588745 ALS2Q96Q42 1657 aa15.13■□□□□ 0.01
SMAD4-205ENST00000588745 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
SMAD4-205ENST00000588745 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
SMAD4-205ENST00000588745 NLRP6P59044 892 aa15.12■□□□□ 0.01
SMAD4-205ENST00000588745 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMAD4-205ENST00000588745 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
SMAD4-205ENST00000588745 FOXO3O43524 673 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 PDE3BQ13370 1112 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 SLIT3O75094 1523 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 NFAT5O94916 1531 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 SBNO1A3KN83 1393 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
SMAD4-205ENST00000588745 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
SMAD4-205ENST00000588745 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
SMAD4-205ENST00000588745 APAF1O14727 1248 aa15.1■□□□□ 0.01
SMAD4-205ENST00000588745 NGEFQ8N5V2 710 aa15.1■□□□□ 0.01
SMAD4-205ENST00000588745 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
SMAD4-205ENST00000588745 FLT4P35916 1363 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 MAP3K19Q56UN5 1328 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 IL13P35225 146 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 LTN1O94822 1766 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
SMAD4-205ENST00000588745 LTBP4Q8N2S1 1624 aa15.08■□□□□ 0
SMAD4-205ENST00000588745 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
SMAD4-205ENST00000588745 NPHP3Q7Z494 1330 aa15.08■□□□□ 0
SMAD4-205ENST00000588745 ZNF521Q96K83 1311 aa15.08■□□□□ 0
SMAD4-205ENST00000588745 SOX12O15370 315 aa15.08■□□□□ 0
SMAD4-205ENST00000588745 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
SMAD4-205ENST00000588745 PXDNQ92626 1479 aa15.08■□□□□ 0
SMAD4-205ENST00000588745 RTL1A6NKG5 1358 aa15.07■□□□□ 0
SMAD4-205ENST00000588745 USP19O94966 1318 aa15.06■□□□□ 0
SMAD4-205ENST00000588745 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
SMAD4-205ENST00000588745 BRINP3Q76B58 766 aa15.05■□□□□ -0
SMAD4-205ENST00000588745 TCP11L2Q8N4U5 519 aa15.05■□□□□ -0
SMAD4-205ENST00000588745 KCNH5Q8NCM2 988 aa15.05■□□□□ -0
SMAD4-205ENST00000588745 PLEKHF1Q96S99 279 aa15.05■□□□□ -0
SMAD4-205ENST00000588745 PNNQ9H307 717 aaKnown RBP15.05■□□□□ -0
SMAD4-205ENST00000588745 NHSL1Q5SYE7 1610 aa15.05■□□□□ -0
SMAD4-205ENST00000588745 MAPK8IP3Q9UPT6 1336 aa15.04■□□□□ -0
SMAD4-205ENST00000588745 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
SMAD4-205ENST00000588745 FCHSD2O94868 740 aa15.04■□□□□ -0
SMAD4-205ENST00000588745 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
SMAD4-205ENST00000588745 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
SMAD4-205ENST00000588745 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
SMAD4-205ENST00000588745 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
SMAD4-205ENST00000588745 AMPHP49418 695 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms