RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 UTP14CQ5TAP6 766 aaKnown RBP7.3□□□□□ -1.24
LINC01538-201ENST00000588074 BMP2KQ9NSY1 1161 aaPredicted RBP7.3□□□□□ -1.24
LINC01538-201ENST00000588074 RCCD1A6NED2 376 aa7.3□□□□□ -1.24
LINC01538-201ENST00000588074 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
LINC01538-201ENST00000588074 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L3A6NCW0 530 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L4A6NCW7 530 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 MMP14P50281 582 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L2Q6R6M4 530 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L1Q7RTZ2 530 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 BACH2Q9BYV9 841 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 ZBTB3Q9H5J0 574 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 ANO2Q9NQ90 1003 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 TMEM51Q9NW97 253 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 FAM198AQ9UFP1 575 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 TPM2P07951 284 aa7.29□□□□□ -1.24
LINC01538-201ENST00000588074 HDLBPQ00341 1268 aaKnown RBP7.29□□□□□ -1.24
LINC01538-201ENST00000588074 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L15C9J2P7 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L10C9JJH3 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L13C9JLJ4 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L12C9JPN9 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L11C9JVI0 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L21D6R901 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L18D6R9N7 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L22D6RA61 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L17D6RBQ6 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L19D6RCP7 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L20D6RJB6 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 MARCH6O60337 910 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 MCCP23508 829 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 GJA5P36382 358 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 USP17L24Q0WX57 530 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
LINC01538-201ENST00000588074 NR6A1Q15406 480 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 PTCD2Q8WV60 388 aaKnown RBP7.28□□□□□ -1.24
LINC01538-201ENST00000588074 ZNF830Q96NB3 372 aaPredicted RBP7.28□□□□□ -1.24
LINC01538-201ENST00000588074 MAP7D2Q96T17 732 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
LINC01538-201ENST00000588074 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 CFAP99D6REC4 459 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 LDLRAD1Q5T700 205 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 ZNF592Q92610 1267 aa7.28□□□□□ -1.24
LINC01538-201ENST00000588074 ATP2B4P23634 1241 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 IRX3P78415 501 aaPredicted RBP7.27□□□□□ -1.25
LINC01538-201ENST00000588074 AXDND1Q5T1B0 1012 aaPredicted RBP7.27□□□□□ -1.25
LINC01538-201ENST00000588074 KCNG1Q9UIX4 513 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 PTMSP20962 102 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 SOX11P35716 441 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 FAM174AQ8TBP5 190 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 ZNF622Q969S3 477 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC01538-201ENST00000588074 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 LNPKQ9C0E8 428 aa7.27□□□□□ -1.25
LINC01538-201ENST00000588074 TIE1P35590 1138 aa7.26□□□□□ -1.25
LINC01538-201ENST00000588074 FOSBP53539 338 aa7.26□□□□□ -1.25
LINC01538-201ENST00000588074 RAD51AP2Q09MP3 1159 aa7.26□□□□□ -1.25
LINC01538-201ENST00000588074 TYW1BQ6NUM6 668 aa7.26□□□□□ -1.25
LINC01538-201ENST00000588074 NOL8Q76FK4 1167 aaKnown RBP7.26□□□□□ -1.25
LINC01538-201ENST00000588074 C6orf132Q5T0Z8 1188 aa7.26□□□□□ -1.25
LINC01538-201ENST00000588074 TMED8Q6PL24 325 aaPredicted RBP7.26□□□□□ -1.25
LINC01538-201ENST00000588074 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
LINC01538-201ENST00000588074 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
LINC01538-201ENST00000588074 USP17L5A8MUK1 530 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 CD44P16070 742 aaKnown RBP7.25□□□□□ -1.25
LINC01538-201ENST00000588074 FAM193AP78312 1265 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 PTK7Q13308 1070 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 TAF3Q5VWG9 929 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 PIK3R5Q8WYR1 880 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
LINC01538-201ENST00000588074 PLCD4Q9BRC7 762 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 H3BRB1 525 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 RAB11FIP3O75154 756 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 ABL1P00519 1130 aa7.25□□□□□ -1.25
LINC01538-201ENST00000588074 TUT1Q9H6E5 874 aaKnown RBP7.25□□□□□ -1.25
LINC01538-201ENST00000588074 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC01538-201ENST00000588074 HOXA2O43364 376 aa7.24□□□□□ -1.25
LINC01538-201ENST00000588074 FDX1P10109 184 aa7.24□□□□□ -1.25
LINC01538-201ENST00000588074 MICAL1Q8TDZ2 1067 aa7.24□□□□□ -1.25
LINC01538-201ENST00000588074 PRDM10Q9NQV6 1147 aa7.24□□□□□ -1.25
LINC01538-201ENST00000588074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.23□□□□□ -1.25
LINC01538-201ENST00000588074 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
LINC01538-201ENST00000588074 SKIP12755 728 aa7.23□□□□□ -1.25
LINC01538-201ENST00000588074 EYA1Q99502 592 aa7.23□□□□□ -1.25
LINC01538-201ENST00000588074 RRAGDQ9NQL2 400 aaPredicted RBP7.23□□□□□ -1.25
LINC01538-201ENST00000588074 SBNO2Q9Y2G9 1366 aa7.23□□□□□ -1.25
LINC01538-201ENST00000588074 FXR2P51116 673 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC01538-201ENST00000588074 ECM1Q16610 540 aa7.23□□□□□ -1.25
LINC01538-201ENST00000588074 CDCA7LQ96GN5 454 aa7.23□□□□□ -1.25
LINC01538-201ENST00000588074 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
LINC01538-201ENST00000588074 MAPK1P28482 360 aa7.22□□□□□ -1.25
LINC01538-201ENST00000588074 IRX5P78411 483 aaPredicted RBP7.22□□□□□ -1.25
LINC01538-201ENST00000588074 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
LINC01538-201ENST00000588074 CDCA7Q9BWT1 371 aaPredicted RBP7.22□□□□□ -1.25
LINC01538-201ENST00000588074 TANGO6Q9C0B7 1094 aa7.22□□□□□ -1.25
LINC01538-201ENST00000588074 TNNT2P45379 298 aaPredicted RBP7.22□□□□□ -1.25
LINC01538-201ENST00000588074 MRPL58Q14197 206 aaKnown RBP7.22□□□□□ -1.25
LINC01538-201ENST00000588074 PPP4R2Q9NY27 417 aa7.22□□□□□ -1.25
LINC01538-201ENST00000588074 KIF20AO95235 890 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms